|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 2445 | VNG1557 | NP1114A | Hmu1996 | HVO_B0057 | Hbo1622 | HQ3033A | rrnAC3008 | hla2069 |
2026 | VNG1557 | 2530 | 1847 | 1931 | 1735 | 1712 | 1915 | 1493 | 1895 |
2044 | NP1114A | 1847 | 2541 | 1958 | 1865 | 1805 | 1957 | 1553 | 1885 |
2110 | Hmu1996 | 1931 | 1958 | 2427 | 1832 | 1805 | 2007 | 1582 | 2002 |
2031 | HVO_B0057 | 1735 | 1865 | 1832 | 2588 | 2143 | 1866 | 1601 | 1935 |
2021 | Hbo1622 | 1712 | 1805 | 1805 | 2143 | 2392 | 1844 | 1615 | 1969 |
2120 | HQ3033A | 1915 | 1957 | 2007 | 1866 | 1844 | 2661 | 1620 | 1980 |
1699 | rrnAC3008 | 1493 | 1553 | 1582 | 1601 | 1615 | 1620 | 1822 | 1654 |
2164 | hla2069 | 1895 | 1885 | 2002 | 1935 | 1969 | 1980 | 1654 | 2509 |
357 symbols consensus MSTDDTTDTDDS-------------------SESKCG------GGATDTADDTTSQCGA- #oth 113221444445454434223234334231122141111222225524354224261121 VNG1557 :::::::T::::TSNCGA::STTDTDD:::::T:S::::::::-:S:TDT::SA:S::G: NP1114A :::::::E:T:ASTTESKCGASEAEASTE::::::::::::::ASK:::TTE:E:A:::: Hmu1996 ::::::::ASTD:::::::::::::::::::T::N::::::::--:SS:D::SAAT:::: HVO_B0057 ::DS:::TESNCGGATTE::STESTDTTN:::::N:::::::::TK:E:ET::::N:::: Hbo1622 ::ESN:Q-----::::::::::::::::::::::::::::::::KTSESSEE:::K::G: HQ3033A ::::::A::K:TAESSSDQNPTPQVEPADVAT::T::ASQTRA:AEST::S:S:::::GS rrnAC3008 ------------:::::::::::::::::::------::::::----------------: hla2069 ::::N:DSV:A:TD:::::::::::::::::T:::::ASSPDD:::::D:-::G:::::: consensus ---S-SSDSSSSSGCGASS-----EQTDEKVGATVDDFDADPGRLVAVGLGPGRPEGMTA #oth 112145633324141132311224353434141122112221131211111113232..4 VNG1557 :::-:A:G::D:::::::::::DTDSNEQT:S:::::::::::S:::::::::::::::D NP1114A :::-:D:G:E:D:T::G:D:::::-SEEDE::::::::::E::::::::::::K:K:::: Hmu1996 :::-G:DS:::G::::G:D:::::ST:::::::::::::::::::::::::::Q:::::Q HVO_B0057 ::S:STT:DD:A:K::G::GGSKK:::A:::E::IE:::GE::Q::::::::::ASE::T Hbo1622 ::S:K:K:T::::K::S:K::::K:::::::E:::E::::E::Q::::::::::ASE::T HQ3033A TDA:A:AS:::::S:::T:::TDEDD:S:N::::::::E::::::L:::::::Q:::::: rrnAC3008 :::-:--------------:::::---------------------------------::: hla2069 ::::SGP::::::S::::K::::S:K:::::K:::E::EG:::S:L:::::::Q:::::E consensus RARAALADAEHIVGYTTYVELLPDEITEGAEDIYDTPMCGEVSRTEEAIDRALAGNDVAI #oth 1.241.42.1........11...111113.11112.............1..1....1... VNG1557 ::T::::::::::::::::D:::::::DD::E::::::::::::::::V:::::::H::: NP1114A ::K:::::::::::::::::::::D:V:A:D::HS::::::::::::::::::::::::: Hmu1996 :::G::L::::::::::::D:::A::::S::EL::::::::::::::::::::::::::: HVO_B0057 L:KDT:RE:D::::::::I:::::DVV:::::::S:::::::::::::V::::::::::: Hbo1622 L:KET:R:::::::::::I:::::D:V:::::::S::::::::::::::::T:::::::: HQ3033A :::S::GS::::::::::I:::::::::D:D::::::::::::::::::::::::::::: rrnAC3008 :::S::L:::::::::::::::::::::::D:::N::::::::::::::::::::::::: hla2069 :::GT:M::::::::::::::::::V::S::EL::::::::::::::::::::::::::: consensus IGSGDPNVYALAGLALEILESKGATASMVDFEVVPGVPAAQSCAARLGAPLVNDTVSISL #oth 1.................2....1.11111.1..1........1..1.......1.11.. VNG1557 ::::::::::::::::::T::::::P::L::::::::::::::G::::::::::S::::: NP1114A :::::::::::::::::::::::G:::A:::::::::::::::G:::::::::::::V:: Hmu1996 :::::::::::::::::::::::G:::A:::::::::::::::G:::::::::::::V:: HVO_B0057 V::::::::::::::::::::::::::::::D::A:::::::::::::::::::::T::: Hbo1622 V::::::::::::::::::::::::::::::D::A:::::::::::::::::::::T::: HQ3033A V::::::::::::::::::::::G:::::E::::::::::::::::V::::::::::V:: rrnAC3008 ::::::::::::::::::I:::::::T:L::D::::::::::::::V::::::::::::: hla2069 :::::::::::::::::::::::::::::::::::::::::::G:::::::::::::::: consensus SDHLTPMPTIESRLHAAAKEGFTIAIYNPWSRKRRENFQKCCEILLEHRDPDTPVGIVHG #oth .....2.11......11.4.1...3..........2.1121.....2..111....1..1 VNG1557 ::::::::E:::::::V:S:E:::S:::::::::::::::A:::::A:::A::::::::: NP1114A :::::::EE:::::::V:P::::::::::::::::::::T:::::::::::E:::::::: Hmu1996 :::::::E::::::::V:D::::::::::::::::::::R::::::D::::::::::::: HVO_B0057 :::::S:::::::::::::::::::::::::::::S:YE::::::::::A:::::::::: Hbo1622 :::::S:::::::::S::::::::V::::::::::S:YE::::::::::::E:::::::: HQ3033A :::::S:E::::::::V:A:::::T:::::::::::::ET::::::::::::::::V::: rrnAC3008 :::::D::::::::::::::::::T::::::::::D:YE::::::::::::E::::V::A hla2069 :::::D::::::::::::::::::S::::::::::::Y:::::::::::::E:::::::: consensus AGRDDEEVEIVELGELPDLGETDLIDMTTTLLVGNEETYVWDDRMVTPRGYETKYDY #oth .1.1..422.22.22.121..2.11.....221..11...1.1.........2..1. VNG1557 :::E::::::TT::::ESY:::::::::::VVI::A::::F:::::::::::::::: NP1114A :S::::KTL:TD::T::E:::E:IV:::::II::::::::::::::::::::::::: Hmu1996 :::E::S::::T::::E:::::::::::::I:::::D:::::::::::::::S:::: HVO_B0057 :::::::::::D::D:::::::::V:::::::::::::::::::::::::::Q::E: Hbo1622 :::E:::::::::QD::E::::::::::::::::::::::::G:::::::::Q::E: HQ3033A ::::::QSK:I:::::ES::::::::::::II::::::::::::::::::::::::: rrnAC3008 :::E::Q::::::::::E::::::V:::::::::::D:::::::::::::::::::: hla2069 ::::::A::::::RD::::::S::V::::::I::::::::::::::::::::S::::