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[KL] (SSL2) COG1061 DNA or RNA helicases of superfamily II
8 genomes BUD0989 8 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG1406

rrnAC0181

HVO_1723

Hbo3098

Hmu0716

-

hla1717

NP4200A

HQ2528A

Pairwise sequence scores
Consensus score4688 HQ2528A NP4200A hla1717 VNG1406 rrnAC0181 Hmu0716 HVO_1723 Hbo3098
3524HQ2528A 5231 2617 3150 1674 2394 2727 3194 3334
3145NP4200A 2617 4727 2808 1642 2455 2824 2688 2744
3658hla1717 3150 2808 5552 1625 2416 2833 3321 3268
1877VNG1406 1674 1642 1625 2472 1693 1762 1700 1765
2882rrnAC0181 2394 2455 2416 1693 3584 2783 2455 2584
3468Hmu0716 2727 2824 2833 1762 2783 4789 2934 3056
3797HVO_1723 3194 2688 3321 1700 2455 2934 5310 3615
3866Hbo3098 3334 2744 3268 1765 2584 3056 3615 4901

829 symbols
consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
HQ2528A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP4200A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
hla1717         VSRSSAVRPVVAGSGRRTRSLAATVTVAPVNSRGRSGLHHPVADAIHFPLADAIHFPLAD
VNG1406         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC0181       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hmu0716         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
HVO_1723        ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo3098         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       -----------MTTDD-DDASADDAGDID-------------------------------
#oth            111111222222444264445444253333111111111113122344443224443333
HQ2528A         ::::::::::::GKKSKS:::VES:KS::T:::::::::::::::QTETAVESNDHPRSN
NP4200A         ::::::MSNRCVV:A:P:I::::ADA::::::::::::::::::::::::::::::::::
hla1717         AIHFPLATEPEVM:::SG:PA:G::S:S:T:::::::::::GDAPDSAAGNDSRADPDSQ
VNG1406         :::::::::::-----:------------:::::::::::::::::::::::::::::::
rrnAC0181       :::::::::::-----:------------:::::::::::::::::::::::::::::::
Hmu0716         :::::::::::V::E:DAE:GG:::::QP:::::::::::::::::::::::::::::::
HVO_1723        :::::::::::::AE:E:QSPP:GD::::GAGASRDVLDRLADVTEVSDVPDASTVDADQ
Hbo3098         :::::::::::::E::AG:TDGPSDTLSSE:::::::::::SD::ELTSEPDAVGQTDIP

consensus       -----E-LSLADFYDALEAEGRPVVTAQQVARRLGLTQAAAREALAALADDGEVQRLDVE
#oth            433332522445222233233212412444234325333525231431445353324413
HQ2528A         KTETSDR::TDQV::IF::AR::::::STI::Y:SRN::TIT:Q:ST:I:S:VIDNIT:D
NP4200A         :::::-:--IET:::::A:AR::::::EDL:TTA:C:VEV:N::::::::ES:::::::D
hla1717         DNDAA:E:::DR:HE:::::E:::A::SE::::::T::::::D:::::V:R:D:D:::::
VNG1406         :::::-:-----------------------------------------------------
rrnAC0181       :::::-:-----------------------------------------------------
Hmu0716         ::::::TVTV::V:::ID:V:K:HL:PAE::AKT:::ADE:::::ER:GE:A:LE:Q::S
HVO_1723        PSEIADGV:::A::E:::S::::::::::::::::VS::D:MDG:D:::GA:R:::VN::
Hbo3098         ANVAV:N:::S:::::::::::::M::::TG:::::S::::S:::DR::R::TL::VE::

consensus       DDPVVYYPTDW-RLADRERVVLFPDRREIVVDNPTQYTRARLSQFAHLVDTTG-------
#oth            433313214423544421123311412221125231211131311111322213133111
HQ2528A         :::::::::SLSEMST:::I:V::::::::::::::::::Q:T::::::::::ERQPVDQ
NP4200A         :ESA:WA:ER-:TAGAT:::TV::E::D::::E:E:::::L:T:::::EE:N-:::::::
hla1717         S::I:F:::::G:::T:::::A::S:::::::R:::F::::::::::::::::T:EP:::
VNG1406         -----------:-----------------------------------------:::::::
rrnAC0181       -----------:-----------------------------------------:::::::
Hmu0716         GAEA::::P:LDAVT:::::I:::::H:V::EHAD:F:::Q::::::::::N-:::::::
HVO_1723        T::::W:::E:GD::S::::::::K:::::::::::::::::::::::A::::DREG:::
Hbo3098         T:::::::AE:D:::::::I::::E:::::::Q:::::::::A:::::::S::DRNA:::

consensus       ---------------------------------------------RTRGYLYRIRQEDVW
#oth            111111111111111111111111111111111111111111111453122142121121
HQ2528A         HGPQVSEEMIDQDSISITDPEKTTIVEDEDEDAEADADTRAPRQPQS::::::V::::I:
NP4200A         :::::::::::::::::::::::::::::::::::::::::::::SES::I:AV:E::I:
hla1717         :::::::::::::::::::::::::::::::::::::::::::::G::::::::::::::
VNG1406         :::::::::::::::::::::::::::::::::::::::::::::---------------
rrnAC0181       :::::::::::::::::::::::::::::::::::::::::::::---------------
Hmu0716         ::::::::::::::::::::::::::::::::::::::::::::::AG:AI:E::E::::
HVO_1723        ::::::::::::::::::::::::::::::::::::::::::::::G:::::::::::::
Hbo3098         :::::::::::::::::::::::::::::::::::::::::::::G::::::K:::::::

consensus       QAPFDDLDELLAMIRSVLPRRSPHLEEWVEDQWERAHKFRLYTHEDGYVVLEAASESLMG
#oth            311222334122432222232433115123511311331115212221211213332121
HQ2528A         :::::::GS:ISV:::A::::V:G::S:I:T::K::NR:::F::N:::::::::::::::
NP4200A         N::YES:P::::T:::A:GGHHEA::S:::G::::::::::T:::::::::::K:AD:L:
hla1717         A:::E:A:G:I:SL:::::::FD:::D:IR:::R:::R:::::::::::::Q::::::::
VNG1406         ------------------------------------------------------------
rrnAC0181       -------------M:D::GE:::::::::TS:::::R::::K:::::::::::E:DD:::
Hmu0716         :::YES::::::T:HD:VGE::E::::::RS:::::R::::V::::::T::::ENDD:::
HVO_1723        ::::::V:S::S:L:::::E::::::A::::::K:::Q::::S::E::T:::::T:::::
Hbo3098         ::::::::A::S:M::::::::::::T:::N::K::NQ::::::::D:::::::::::::

consensus       NVARQKLDDDHLRAPISDTEAWVREEATAAIKRTLYEAGYPVRDDRDLETGDALDVDLRL
#oth            111423112332412222333113235416312311211112413131241333533144
HQ2528A         ::::::::EEQ:I::::::QN:::DG:E:T::::::::::::I:E:E::::EP:T:T:EA
NP4200A         :::EPR:::GV:::RLD:ET:::A::R::DL:Q:::::::::Q:H:N:D:::P:PM::T:
hla1717         :::D:H:::::::::::E:::::N:D:V::V::A::D:::::E:::::DV::PV:I::TT
VNG1406         ------------------------------------------------------------
rrnAC0181       ::::P:::::::::::::S:S::N:D:::E:::::::::::::::::::::::IEM::::
Hmu0716         ::::::::::V:::::::S:S::N::M::QL::::::::::::::::::D::::S:E:G:
HVO_1723        :::L:::::::VY:::::::::::D:EI:::::I::D:::::E::::::E:EE:::T:GV
Hbo3098         ::::::::EE::V:::::::S:::DGKE:H:::I:::::::IQ::::::::A::::E::A

consensus       ELRDYQQDWVDRFLDQRSGVLVGPPGSGKTVAAIGALAAIGGETLILVPSRELAAQWREE
#oth            41141152135315223211311121211122321321211....1........4...21
HQ2528A         :::S::::::NN:::::A::::::S::::::T::::::::::::::::::::::S:::A:
NP4200A         :::P::S::IA::A:AG::::::::::::::::L:IM:D:E::::::::::::::::::N
hla1717         D::S::ET::ET:::A::::Y:::::::::::::ATI:::::::::::::::::G:::::
VNG1406         ---------------------------------M:::ESV:::::V::::::::T:::::
rrnAC0181       R:::::::::E::TE:G:::F::::::::::::M::M:::::::::::::::::T:::D:
Hmu0716         P:::::A:::Q::QE:G:::F:::::::::::TM:VME:V::::::::::::::S:::D:
HVO_1723        D:::::R::::::V:::A::::::::A:::I:G::::::V::::::::::::::R:::::
Hbo3098         :::E:::::T:::TE:K:::::::::A::::TG::I:::V:::::V::::::::::::::

consensus       LLRHTDLDDDQIGEYHGGEKEIRPVTIATYQTAGMDRHRSLFDSREWGLIVYDEVHHIPA
#oth            136312134311.1....4.4112......11.......31..3.2....21..11.111
HQ2528A         :IQ::::N::::::::::K:TVQS::::::::::::::::::::::::::I:::::::::
NP4200A         ::NE:T:SPE:V::::::S::::::::::::::::::::::::::K:::::::::::::S
hla1717         ::E:STV:PAD::L::::Q::::::::::::I:::::::A:::::K::::CF::A:::T:
VNG1406         ::AN:S:TG:::::::::::RV:::::::::::::::::HV::D::::::::::::::::
rrnAC0181       :V:::S:T::D::::::::::::A::::::R::::::::K:::Q:K:::::F:::::V:S
Hmu0716         ::L:::::ES::::::::::A:::::::::R::::::::K:::E:R:::::::::Q::::
HVO_1723        :RST::::A:::::::::A::::::::::::::::::::::::::R::::I:::A::::S
Hbo3098         I::::S:SE:::::::::Q:QV:::::::::::::::::::::D:::::::::::::V:S

consensus       PVARRSADLQTKHRLGLSATPVREDDKEEEIFTLIGPPIGTDWSALFDAGYVQEPEVEIR
#oth            4132...4..3......1...2..212142.1..1.2...11.32..11.1.1..1.1.1
HQ2528A         A:Y:::::::::::::::::::::::::T:::::V::::::::::::E:::::::Y:::Q
NP4200A         ::H::::Q:::::::::T::::::T:DQQQ:Y::V:Q::::N:E:::E::::A:::::::
hla1717         :IFS:::E::A:::::::::::::TGS::::Y::::R:::A::DE::E::F:::::::::
VNG1406         E::::::S::S::::::T::::::::::AD:Y::V:R::::::D::::::F:A:::::::
rrnAC0181       :IH::::::::::::::T:::T::S:D::::::::::::::::GK:::E:::A:::::::
Hmu0716         D::::::R::G::::::T::::::::::::::::V:::::::::::::::F::::::Q::
HVO_1723        R:FQ::::::S::::::::::I::::::A::::::::::::::GK:::::::::::::::
Hbo3098         RIY:::::::A::::::::::I::::::K:::::::::::::::K::E::::::::::::

consensus       YVPWADDTARNEYASADGRERRQLAAENPAKIAEIRRLLAEHPDAKALVFVEYLDQGEAI
#oth            321.4114523.13223.131122.13.12.15113422541443211..111121.131
HQ2528A         ::::K:ELSQ::W:N::::D::R::::::Q::TTTKK::GM:S::S::::::W::H:::L
NP4200A         FL:::SE:H::::G::T:H:K:::::T:::::R::SAI:H:NRGS::I:::::IE::DQ:
hla1717         ::::R:EM::::::::::::::R:::::::::E:::Y:::A:R:K:::::I:::::::::
VNG1406         ::::R::DD:Y:::A:S:HT::R::::::::E:::EH:VDQ:G:TQ:::::D::S:::R:
rrnAC0181       L:::G:E:EQS::S:TS:HD:::A::S:TG::D:::YA:::N:A::::::I:::::::::
Hmu0716         QI::S::EVAD::V::V:HG:::T::T:::::D:::H::T:::H::::::::::::::::
HVO_1723        ::G:G::M::::W::S:::::HM:::M::G::F:::::R:R:A:S:T::::D::::::::
Hbo3098         ::::::::::::WS:::::::::::SM::Q::::T::::RQ::KS::::::D::::::EL

consensus       AEALDVPFISGETPHARRERLFDRFRR---------------GELDTLVISRVGDEGIDL
#oth            122111..11..11.32.353.34..4111111111111111233321.1..1.......
HQ2528A         :D:::A::V:::M::Y::DQV:ES::D:::::::::::::::D:ISV:::::::::::::
NP4200A         ::::G:::::::::::::SK::G:::G::::::::::::::::Q:::I:V::::::::::
hla1717         :D::G::::::::::HE:AE::R:::EEGTEGGEREGIGADGDDV::::V::::::::::
VNG1406         ::R::A::VN:::::S:::TH::Q::T::::::::::::::::A::A::V::I:::::::
rrnAC0181       S::I:A:::::::::::::K:::E:::::::::::::::::::::T:::V::::::::::
Hmu0716         :AE::::::::::R::E::::::E::::::::::::::::::N:R:::::::::::::::
HVO_1723        ::::::::V::::R:H:::AY:EA::D::::::::::::::::D::::::::I:::::::
Hbo3098         ::::::::::::MR:HH:::::RQ::E::::::::::::::::::R::::::::::::::

consensus       PNAELAIVASGLGGSRRQGAQRAGRTMRPTGSALVYVLATRGTSEEDFARRQMRHLAEKG
#oth            .1112.21...........1.........31412222.....13..11113122..151.
HQ2528A         ::::::V::::::::::::::::::::::::::Q:::::::::T::E::Q::L:::::::
NP4200A         :DT:V::A:::::::::::::::::::::V:K:RM:::::::SR::::::KRTK:::AR:
hla1717         :::::::::::::::::::S::::::::::::::::::::::S:::E::Q:::::::R::
VNG1406         :D::F:V::::::::::::::::::::::GSQS:LF:::::::E:::H::SR::::ST::
rrnAC0181       :D::::L::::::::::::::::::::::A:D:RMVI::::::T::::V::::::::S::
Hmu0716         :D:::::::::::::::::::::::::::V:D:QL:L::::::E::::V:Q::::::S::
HVO_1723        :::G:::::::::::::::S:::::::::::::::::::::::::::::Q:::Q:::G::
Hbo3098         :::::::::::::::::::::::::::::A:G:::::::::::::::::Q::::::::::

consensus       IRVTETDAAAVD-------------------------------------
#oth            1..2.43354544434442311222111111111111111111111111
HQ2528A         :::::R:V:EE:V::::::::::::::::::::::::::::::::::::
NP4200A         V::Q:AEPL:FGDGRVADEE:::::::::::::::::::::::::::::
hla1717         :::R::NV:E--:::::::::::::::::::::::::::::::::::::
VNG1406         V::::S::SHSP:::::::::::::::::::::::::::::::::::::
rrnAC0181       ::::::E:E::EPPAKTE:::::::::::::::::::::::::::::::
Hmu0716         :::::Q::E::GERSGRAEDDAGDE::::::::::::::::::::::::
HVO_1723        :::R::S:DDL:PESDGGDTDADTDTEDDESDGAESASADGAESATTDE
Hbo3098         V::::S:LTT--:::::::::::::::::::::::::::::::::::::