| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 2308 | rrnAC3137 | hla1595 | VNG2455 | Hbo1370 | HQ3045A | Hmu2613 | HVO_0126 | NP0860A |
| 1218 | rrnAC3137 | 1908 | 979 | 964 | 1066 | 1036 | 1153 | 1080 | 1082 |
| 1794 | hla1595 | 979 | 2340 | 1057 | 1484 | 1360 | 1394 | 1509 | 1487 |
| 1257 | VNG2455 | 964 | 1057 | 1759 | 1080 | 1081 | 1041 | 1122 | 1052 |
| 1780 | Hbo1370 | 1066 | 1484 | 1080 | 2519 | 1629 | 1510 | 1587 | 1367 |
| 1644 | HQ3045A | 1036 | 1360 | 1081 | 1629 | 2611 | 1341 | 1531 | 1379 |
| 1725 | Hmu2613 | 1153 | 1394 | 1041 | 1510 | 1341 | 2499 | 1508 | 1469 |
| 1855 | HVO_0126 | 1080 | 1509 | 1122 | 1587 | 1531 | 1508 | 2446 | 1535 |
| 1688 | NP0860A | 1082 | 1487 | 1052 | 1367 | 1379 | 1469 | 1535 | 2359 |
407 symbols consensus VQSSAAL----PIL----GEVLPRVARIAAFIAVGVFAANLAVAFGLVEYIAGLSKYLTR #oth 233435443323331111431311332112532311241223131132322142233114 rrnAC3137 -------::::---::::------------------------------------------ hla1595 :::V::ELV::AL:::::T::A::L:::::::::::::::V::::::IR:V:::AGW::: VNG2455 -------::::---::::------------------------------------------ Hbo1370 :::VES:ATLW::F::::V::::::::::VLV:::::V:::::G::::::V::::::::: HQ3045A MNVL:LTDSFW:::::::VD:I:::::::V:VT::::L::V::E:::::R::VI:::::: Hmu2613 :::HV::QSVG:VVDLLW:T:::::GT::VTL:L:::L:D::::::I:::::T::::::E HVO_0126 ::P::V::::::V:::::F:::::::::::Y::::::::::V:::::::R:::::R:::S NP0860A MEP:VGA::::LL:::::::::::ILT:::A::I::AF:::L::::AIQ:::A:::P::G consensus PANLPDEVGTAILTTAASTTAGYGMLAEFRESGVLDDRATLVAVTINTFFGFVQHIFTFY #oth 1111121112113212112111121.111.11.3.1.21.11.11.......1..11.1. rrnAC3137 ------------------------:::D:::::A:S::::II::I:::::::A:::I::: hla1595 :::::::::::::::::::::::AT:::Y::::L:::::::::::::::::::::V::Y: VNG2455 ------------------------::K:Y:DA:::S:::::::I:::::::::::::::: Hbo1370 :::::::::::::::::::::::::::::::::R:S:T:::::::::::::::::::::: HQ3045A ::::::::::::I::::::::::::::D:::::R:S:IE::I:::::::::::::::::: Hmu2613 :::::R:::::::A:T::P:::::::::::::::::::::::::::::::::A::::::: HVO_0126 ::::::::::::V::::::::::::::::::::::::::::::::::::::::::::::: NP0860A :::::::::S::::::::::::::::::Y:D::L:::::::::::::::::::::::::: consensus APVLIPILGLRVGVLYVGARAAIALAITATGVLAGAVL---------------------- #oth 2.1.1....422.22..22.1211.1.132.12..1311111111111111111111111 rrnAC3137 ::I::::::F:::::::AT:GL::::::L::IA::::::::::::::::::::::::::: hla1595 I::::::::VET::I::S:::G::::::V::::::G:::::::::::::::::::::::: VNG2455 ::::L::::::L:LM:::::::VS:G:::A:::::::V:::::::::::::::::::::: Hbo1370 :::::::::::::LM::::::::S:G::L::::::GM::::::::::::::::::::::: HQ3045A :::::::::A:::::::::::::::G:SIV::::::I:LRSTEPLSKQQQQEHTTTTDSD Hmu2613 :::::::::::::L:::::::::S::::LV:I::::L::::::::::::::::::::::: HVO_0126 W::::::::RE::FM:::::::::::::::::V::::::::::::::::::::::::::: NP0860A ::::::::::K::::::SM::G:S::::::::::::L::::::::::::::::::::::: consensus -LSERNVDRSAMP-----------ADPAAPGG---DAGD------ETTREKVRDAAAKTW #oth 1.3632254445445322221111235353341112443243243324.25233.34325 rrnAC3137 ::DAS::G::GAN:::::::::::T:::PD::TAG::A:VFDDRP::R:AA::A:FDA:T hla1595 :::::::::::L-::::::::::::EVD:T:P:::::DE::::::R:S::R::E::T:S: VNG2455 ::::DD:ASASD-::::::::::::GVTM::E:::::A::::::::S:::T:AG:VT::G Hbo1370 :::RADARLDDV:TDAD:::::::T:A:VEAD:::GR:PAEFDTP::::AVI:E:G:::: HQ3045A A:TKAE:ETGGKTRKSDTRS::::TSNTT:RS::::G:PVTTDDSRSL:TIL:A:GEQ:F Hmu2613 :::N::::::R::EV::::::::::::TEEH::::----::::::-:A:::L:::::S:A HVO_0126 ::AD::TTPV:VTETDGSGGAVDA::S::DA:::::S::AA:ESDDSL::T:D:::RS:: NP0860A :::S:::TPG::SDGD::::::::S:TET:::::::SSP::::::--::::LL::GRSGL consensus EKLRRIVPRLAVVYALVTALVETY----------DLEAL-----------T-AAAEPL-- #oth 6122321...121.3314433335111111111232422111111111112134351222 rrnAC3137 D:V:D:L::::AI::V:SL:LAYS:::::::::DE:LT::::::::::::IGSNGASVTT hla1595 ST:::T::::::::T::I:F:TH::::::::::::V::::::::::::::::SV:::I:: VNG2455 G::KTL:::::::::A:VF:T::::::::::::::VT:F::::::::::::::::::::: Hbo1370 P::K:L:::::I::F::::::::NAAVWLLERTTGVQTV:::::::::::::DVTGSV:: HQ3045A A:T::::::::I::V:I:IVI::Q::::::::::N:Q::::::::::::::::I:::::: Hmu2613 ::::D:L:::L:I::I:AV::AWR::::::::::EIP::VTLVAVLSESSAGGIVPS:SE HVO_0126 K:::::::::::::VA::L:LR:T:::::::::::::SF:::::::::::A::L:S:::: NP0860A ::TWE:L::::I::T::VVGTTY::::::::::::::S:::::::::::::GG::D:::: consensus -----TGLLGLPGAAVPVIAVFAFDTTAGAATIAPLVEN-TFTARTAVATMLVGGIVSFA #oth 222211322...11.211112113...4.1422.1523414.1222...11.2...2..1 rrnAC3137 AADGFA:::::::::I::::AY:L:::S::TV::::IR:G::S:::::::::::::I::: hla1595 :::::::::::::::::::::YTL::::::V:L:GTA:G:I::L:::::SL:I:::L::: VNG2455 ::::::SV:::::V:::AV:T::V:::T::IF:::H:PG:E:::GE:::::::::::::: Hbo1370 ::::::::::::S::::::::::::::V:::::::::GE:A::P:::::::::::::::: HQ3045A ::::::AV:::::::L::V:::::::::::::V::M:GP:::::Q:::::::L::::::: Hmu2613 SVGTF:SAV:::S:::G:V::YTI:::N:SIVL::F:::G:::P:Q:::::::::::::: HVO_0126 ::::::N:V:::::::::VVA::::::T:::::::AIGE::::P:Q::::::I:::I::: NP0860A :::::AA:T:::S::::::V:Y:::::S::L:::::I:DGV:::::::::::I::::::T consensus VSTFKRSIPFQYGIWGAEFGSKVIAVNTALKIVFIALAVALLLA--- #oth ....1...........22..1..12..141.221.331231.13211 rrnAC3137 ::::::::::::::::R:::::::V:::G::::W::::LVV::-::: hla1595 ::::R:::::::::::::::T::::::::::LL::SIT::::::PVW VNG2455 :::::::::::::::::R:::::::::I:A:V:::SA:I:V::V::: Hbo1370 :::::::::::::::::R:::::V:::::::::::G::LVV::VP:: HQ3045A ::::::::::::::::PT::::::I:::V:::I::TA:LGV::L::: Hmu2613 ::::::::::::::::::::::::::::T::::::::::V:::VP:: HVO_0126 ::::::::::::::::P:::::::::::G:::::::V:::::V:::: NP0860A ::::::::::::::::::::T:::I:::S::VLW::I::T::::F::