|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 1840 | HQ1269A | HVO_0680 | hla0329 | Hbo0856 | VNG0252 | NP1224A | rrnAC1650 | Hmu0847 |
1431 | HQ1269A | 1825 | 1360 | 1340 | 1416 | 1322 | 1179 | 1181 | 1155 |
1540 | HVO_0680 | 1360 | 1855 | 1393 | 1530 | 1266 | 1303 | 1271 | 1248 |
1480 | hla0329 | 1340 | 1393 | 1842 | 1478 | 1273 | 1241 | 1244 | 1253 |
1556 | Hbo0856 | 1416 | 1530 | 1478 | 1883 | 1320 | 1278 | 1254 | 1259 |
1440 | VNG0252 | 1322 | 1266 | 1273 | 1320 | 1939 | 1265 | 1252 | 1270 |
1455 | NP1224A | 1179 | 1303 | 1241 | 1278 | 1265 | 1815 | 1378 | 1363 |
1481 | rrnAC1650 | 1181 | 1271 | 1244 | 1254 | 1252 | 1378 | 1937 | 1662 |
1485 | Hmu0847 | 1155 | 1248 | 1253 | 1259 | 1270 | 1363 | 1662 | 1844 |
258 symbols consensus ----------------MNAPWADWDHILKIDPDKDLVDGETFEDVCATGTDAIEIGGTLD #oth 12222222212222222342.31.1.12.1....4.321...2.113.....1.1...11 HQ1269A ::::::::::::::::::G::TE:::V::V::::P:::::::::::Q::::::::::::: HVO_0680 :::::::::::::::::SY::E:::::T::::::::::::::::::E:::::L::::::: hla0329 ::::::::::::::::::N::D::::V::V::::E:HGN:::::::R::::::::::::: Hbo0856 :::::::::::::::::TG::T::N:V::V::::::I:::::::::Q::::::::::::: VNG0252 MGASKGFCGRHGNAVD:T::::::::V:::::::S:::::::D:IAQ::::::::::::: NP1224A :::::::::::::::::S::::E::::V::::::T:A:::::Q:::::::::L:::::TG rrnAC1650 :MGVSEAVIRPRASLAGMSD:::::::V::::::T::::::::::A::::::::V:::TG Hmu0847 ::::::::::::::::-MST:::::::V::::::S::A:::::::A::::::::::::TG consensus ITEEKMARVVDACAAHDVPLYQEPSNPAVVVDDDALDGYLIPTVFNAGDVFWITGAHKEW #oth 2.21..51.11.234112.2.1....112.121321...11.1.2..3231.21...... HQ1269A ::T:::QE:::::SRY:M:::::::::::::ES:::::::V::::::ESA::VA:::::: HVO_0680 ::::::E::IE:TSKY:::I:::::::G::I::::::::::::::::S:S:::::::::: hla0329 V:A:::S:::::A:EY:::::::::::G::I:SP::::::::::::::GP:::::::::: Hbo0856 ::AD::Q:::::::EY:::::::::::G::I::::::::::::::::K:A:::::::::: VNG0252 V:T:::R::I:::RT:E::::::::::::::E:E::::::V:V:L::::P:::::::::: NP1224A M:::::::::E:T::::I:V:I::::VGA::H:ED::::FV:::L:::::::T::::::: rrnAC1650 M:::::K::::::GK::I:V:I::::::S::HS:RH::::V:V:M:::::T::::::::: Hmu0847 M:::::::::E::G:::I:V:I::::::S::HSNRH::::::V:M:::::T::::::::: consensus VRIDDDLDWDRTFTEAYIVLNPEASVAEYTEANCDLDADDVAAYAEVAERLFGQEIVYVE #oth 1.12332..3..4......1..11...32.3.11212111.211.41..211..111.1. HQ1269A ::::GP:::E::A:::::::::D:::::V::::T:QT:E::::F:T::::::::::I:I: HVO_0680 :::E:G::::::H::::::::::S::::::D:DT:QS:E:::SF:R:::KM:::K:I::: hla0329 :::-::::::::N::::::M:::::::QL:::::::S::::E:::K::::M::::::::: Hbo0856 :::ENGM::G::H::::::::::::::QL:D::::QS:::::S::S::::M::::::::: VNG0252 :::-A::::E::T::::::M::D:::::::G:D:G::::E:G:::T:::::L:::V:::: NP1224A ::L:G:I:::::::::::::::D::::D::::D:N::I:E:::::::::KM::::::::: rrnAC1650 I::::EI::S:::::::::M:::::::S::Q:::::::::::::::A::H:L:::::::: Hmu0847 I:::::I::S:::::::::M:::::::S::Q::::::::E::::::A::H:L:::::::: consensus YSGMLGDPEKVAAAADALDDATLFYGGGIHDYDSAYEMGQHADTIVVGDLLHDEGVDAVR #oth ...12..133.3..332221111......31.11.23.22.2.211..1.1.11.1...1 HQ1269A :::TF::TK::::::A::TES::::::::GG::::::::A:::::::::::::::::::S HVO_0680 :::TY::::::G::H:::::::::::::::::E::::::::::AV:::N::::::::::: hla0329 ::::F::T::::::H::::E:A::::::::G:E::N::AA:S:V:::::::::::::::: Hbo0856 ::::F::T:::Q::H::::::::::::::R:::A:::::::T:VV::::::::::::::: VNG0252 :::T::::AV:E:::GGV:::AV::::::DG::A::R::A::::::::::V:EA:::::: NP1224A :::::::::M:Q::T::TEE::V::::::R::E:::T:R:::::VI::::V::::A:::: rrnAC1650 ::::::::DI::::::I:::::::::::::::E::RT:A:::::::::::V::::::::: Hmu0847 ::::::::::::::DEI::::::::::::::::::RQ:AT::::::::::V::::::::: consensus ETVEGAKDATAER----- #oth ...4.11..524764311 HQ1269A :::A:V:::H:DGEI::: HVO_0680 ::::::::::::LVAE:: hla0329 :::K:::::KDAKDA::: Hbo0856 ::::::R::ME::AEAEA VNG0252 :::S:VR::Q::E::::: NP1224A :::D:::::AD--::::: rrnAC1650 :::K:::::::TVR:::: Hmu0847 ::::::R::::ATPPSE: