|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 2031 | VNG0128 | HQ1135A | hla0406 | HVO_0511 | Hbo1042 | NP0308A | rrnAC2305 | Hmu0083 |
1565 | VNG0128 | 2034 | 1360 | 1394 | 1384 | 1353 | 1397 | 1372 | 1415 |
1521 | HQ1135A | 1360 | 2051 | 1355 | 1367 | 1456 | 1208 | 1330 | 1320 |
1666 | hla0406 | 1394 | 1355 | 2363 | 1570 | 1525 | 1345 | 1380 | 1317 |
1606 | HVO_0511 | 1384 | 1367 | 1570 | 2075 | 1604 | 1282 | 1418 | 1340 |
1653 | Hbo1042 | 1353 | 1456 | 1525 | 1604 | 1992 | 1234 | 1423 | 1371 |
1521 | NP0308A | 1397 | 1208 | 1345 | 1282 | 1234 | 2040 | 1509 | 1526 |
1689 | rrnAC2305 | 1372 | 1330 | 1380 | 1418 | 1423 | 1509 | 2033 | 1704 |
1668 | Hmu0083 | 1415 | 1320 | 1317 | 1340 | 1371 | 1526 | 1704 | 2015 |
302 symbols consensus ----MDEPVLLTGAGGRVGQAILRGLGDDYEWRLLDREPPPAEP-P--V-DHDYYVADVT #oth 1111.121......2.2..3..121221313.112112.254223123143423313.11 VNG0128 MTTR::::::::::S::::::::G:I::::T:::F:::::TDD::-::-:::EFV:::I: HQ1135A ::::::::::::::S::::E::::HA:E:FA:::F::::V:RDRR:SR:AAD:VFIS::: hla0406 :::::::::::::::::::::::::I:::::::::::::L::AKV:DG:T:A:Q::::I: HVO_0511 ::::::Q::::::::::::::::GHI::A:D::::::::LSD:KI:DS:DSTEV:::::: Hbo1042 ::::::::::::::::::::::::H:::RF:::::::::LG::KR:DG:GEE:V::T:I: NP0308A :::::::T::::::K:S::T::RE::A:E:D::Y:FHN:::FD::-::-:::P:L:G::S rrnAC2305 ::::::D:::::::::A::A:::E::E:A:::K:MFHS::AE:::-::-:::E:L:G::S Hmu0083 :::::N::::::::::A::E:::G::E:::::K:MFHS::VE:::-::-:::::V:G::S consensus DEEAVRAAMEGVGAVIHLAGDPRPEAPWDSVLRNNIDGTQKMYEAAVDAGVEKFVFASSN #oth 2342132.42113.11.......22...3...2...2..34332..2321.21221.... VNG0128 ::T:::E:ASD:::IV::::::::::::E::::::::::RTVLD::LA:::DRV:::::: HQ1135A :TN:LIN:I::CK:::::::::::::::K:::E:::N:::AV:::::N:D:DR:I::::: hla0406 NAD:::E::::::::::::::::KT:::::::::::::::VVMR:::::::K::A::::: HVO_0511 ::T:::N::D::H:::::::::::::::::::::::::::Q:FD::::V:::::A::::: Hbo1042 :::::E:::D::Y::::::::::::::::::::::::::HTIF::::::::::IA::::: NP0308A :::L:AE:C:D::::V:::::::RD:::::::E:::H::KVL:D::IE:::::::::::: rrnAC2305 S:GD:A:::D::::::::::::::::::::::E:::::::::::::::E::::::::::: Hmu0083 :D:D::::V:::::I:::::::::D:::N:::A:::::::::::::::E:::R::Y:::: consensus HAVGAYETDERTPDLYRPDDDFRLDGTELPRPGNLYGVSKATGEVLGRYYHDEHGISVCN #oth ....31.131.1.21..22141....2.2.1.1.1..1...1..31..1.1.21123122 VNG0128 ::::H::-TD:K:::::S::::::::::R::::::::::::A::T::::::::::LTFAA HQ1135A ::::S:::N::::AM::S::TY::::R:::::S:::::::::::II::::::N:::A:A: hla0406 ::::G:::E:::::::::::GY:::::::::::::::::::A::S:::F::::::M::VC HVO_0511 ::::::::TD::::M:::HHE:::::::::::S::::::::A::T:::::::H:D:::V: Hbo1042 :::::::::::::EM:::E:G:::::::::H:S:::::::::::::::::Y:H:DL::V: NP0308A ::::HF:-TD:K:E:::T::::::::::F:::::H::I:::::::I:::::::Y::D::: rrnAC2305 ::::SF:::::::EM:::::QY:::::::::::::::::::::::::::::::::L:::: Hmu0083 :::::::-:::K:::::TH:::::::S:F:::::::::::::::II:::::::Y::D::: consensus VRIGNLTKGHPPIDYERGQAMWLSYRDCAHLFDRCLQADYDYEIVYGISDNDRKYYSIER #oth 1......42...21..........2...1.1221124.1.21.11....1...1...121 VNG0128 :::::::A::::::::::::::::P::::::I::::S::::::V:::::::::::::LA: HQ1135A :::::::E::::::::::::::::::::::::S::ID:E:EF::I:::::::::::::AH hla0406 ::::::::D:::RE::::::::::H:::G:::::::::::G::::::::N:::R:::::: HVO_0511 :::::::QH:::KE::::::::::::::G:::EC:IE:::::::::::::::::::::D: Hbo1042 :::::::E::::::::::::::::::::::::E::VL::::::::::::::::::::::: NP0308A I:::::::::::KE:::::::::::::::::H::A::::::F:::::::::::::::L:: rrnAC2305 I::::::R::::::::::::::::::::::IH:CA:::::E::::::::::::::::::: Hmu0083 ::::::::::::::::::::::::::::::IHE:A:L::::F:::::::::::::::::: consensus AKEVLGYDPQDNSA--EFDGEERDAA---------------------------------- #oth .122...2.4....2222214234563521111111111111111111111111111111 VNG0128 ::DA:::E:R:::::::W::D:KLSGGS:::::::::::::::::::::::::::::::: HQ1135A :::T:::N:::::::::WQ:K::IVKKGE::::::::::::::::::::::::::::::: hla0406 :R:::::::A::::DYT:E:KPK:ETGDENDNPTADGGETRFDDPPAEPNFPSDPDTPTD HVO_0511 :RA:::::::::::EFT:E::PL:E::::::::::::::::::::::::::::::::::: Hbo1042 :R:::::::V:::::::HED------:::::::::::::::::::::::::::::::::: NP0308A ::D::::E:K::::DYH:::TPK:D::::::::::::::::::::::::::::::::::: rrnAC2305 ::D:::::::::::::H::::::V:EPEP::::::::::::::::::::::::::::::: Hmu0083 :::::::E::::::::H::::::V:DPT:::::::::::::::::::::::::::::::: consensus -- #oth 11 VNG0128 :: HQ1135A :: hla0406 GA HVO_0511 :: Hbo1042 :: NP0308A :: rrnAC2305 :: Hmu0083 ::