|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 1721 | NP1762A | rrnAC1706 | Hmu2257 | HQ3343A | hla1189 | VNG1772 | HVO_2307 | Hbo1993 |
1184 | NP1762A | 1639 | 962 | 1011 | 966 | 973 | 1012 | 1031 | 1046 |
1176 | rrnAC1706 | 962 | 1731 | 1132 | 894 | 921 | 951 | 1004 | 989 |
1204 | Hmu2257 | 1011 | 1132 | 1703 | 908 | 949 | 968 | 1042 | 1030 |
1200 | HQ3343A | 966 | 894 | 908 | 1933 | 955 | 1006 | 1115 | 1143 |
1229 | hla1189 | 973 | 921 | 949 | 955 | 1908 | 1024 | 1118 | 1116 |
1297 | VNG1772 | 1012 | 951 | 968 | 1006 | 1024 | 1765 | 1140 | 1109 |
1389 | HVO_2307 | 1031 | 1004 | 1042 | 1115 | 1118 | 1140 | 1791 | 1352 |
1427 | Hbo1993 | 1046 | 989 | 1030 | 1143 | 1116 | 1109 | 1352 | 1839 |
263 symbols consensus -------------------------------MVADDYDFWLFDLDGTLVDAEWSYTRSVF #oth 111111111122222222222212222223334432..211..1...2..3112.215.2 NP1762A ::::::::::::::::::::::::::::::::TDST::R:V:::::::::V:PE:V:::: rrnAC1706 :::::::::::::::::::::::::::::::-MTT:::::::::::::::I:PA:P:K:M Hmu2257 ::::::::::::::::::::::::::::::::ART::::::::::::V::IDP::PPT:V HQ3343A MSKTEVEIAGDNKEVKQDMSTYTATEKPESHI::T::::::::F:::I::V::E:::::: hla1189 ::::::::::MLQSPSRPHNALTSRPPTDGP:AVA::::H:::::::::::::::::G:: VNG1772 :::::::::::::::::::::::::::::MAPPV::::V:::::::::::T::::::::: HVO_2307 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::D:: Hbo1993 :::::::::::::::::::::::::::::::::::A:::::::::::::::D:::::E:: consensus DRVGDRLGVEFTDREAEILWHGLGGARDRQLRAWGIDPDAFWPAFHEVEDPAARAEATYL #oth 22.111..24.11231361.1.2.13.4551242212135..321.21.1.52..21.1. NP1762A ::::::::YA:SE:Q:DGI::::::::NEA::S::VA:EQ::T::::::::::::D::F: rrnAC1706 GA:::::::::::::RDA::Y:F::T:S:T:AERNV:QQE::RL:::E:::I:::::::: Hmu2257 SA:::::::S::E:::::::Y::::V:E:V::RR:VE:ER::ET:::::Q::D::G:::: HQ3343A ::::NQ:::S:S:TD:AQ::::::DP:NA:IQ:L:::::T::::L::::::I:::::::: hla1189 :::S::::RP:S::::YV:::::::::GDT::DL::::::::::::AE:::D:::::::: VNG1772 :Q:::::::::::QH::R::::I::T::HY::::::::E:::::::A::::M:::::::: HVO_2307 ::::::::RQ:::::::TI:::::::::PM::E:::::AE::::::RE:::VK:::V::: Hbo1993 ::::::::R:::::::::I:::::::::P:::::D::::D::::::A::::Q:::::::: consensus HDDAERLLAEL---DAPVGVVTHCQQFLTDPVLDHLDIRDWFDTVVCCTDETGWKPDPKP #oth 12..353254242224.112.....31.121.213..24.1.131.2.2222.....16. NP1762A YA::-AVVGDI::::::TAL:::::SY::EA::SE:::E::::::::::ES::::::::: rrnAC1706 Y::::QF::T:::::T:::L::::::Y::E::::::::T:::E:::::D:DI:::::::: Hmu2257 Y::::SFIC:I::::::::::::::PY:::::::R:::::::::::::S:::::::::T: HQ3343A :E::AV::N::HAANV:::::::::S::AQ::V:Y:::E::::SF:T::S:L::::::G: hla1189 ::::A:::DRVDDTGG:T:L:::::R::AE::::R::LS:R::A::::::::::::::D: VNG1772 YE::-:P:GG:::::::T:::::::S::::::::::::A::::V::S:::D:::::::Q: HVO_2307 :::::::IE:IRAAGR:::I:::::::::::::::::V:::::::::::E:::::::AA: Hbo1993 ::::TD:::D:VD::R::::::::::::A:::I::::V:::::::::::E:L::::::E: consensus VELAMGALDV-----PQSDHAGVLAGDGPSDIGAAWNAGLDGIHVERHSPEQRGRCVLGD #oth 234125411321111466256.111..332.11..1..1.113..1.331351.3..211 NP1762A ::::LS:::-:::::--A:GN:::V::::H::::::::::::A:::::::::::L::V:: rrnAC1706 :::::REM:::::::WYNG:H::::::N::::::::::::::V::G:R::TET::::R:: Hmu2257 ::M::TD:G::::::AHDG:E::::::D:D:::::::::::A:::::YD:AE::Q::::: HQ3343A :YH:IES:GQD:::::STPTT::::::A:::V::::::::A:L::::::::::::::::: hla1189 I::::TD:::N::::::::-R:YYV:::E::VS::::::::AV::::VGH:D:::::::: VNG1772 LRV:L:G::-:::::A:P:A:::Y:::AV::V:::K::S::AV:::::::GK::H::::: HVO_2307 :RR:I:G:GLDDRLLTDGGT::::::::E:::::::::::::::::::G::H:::::::E Hbo1993 :HHT:K::GLD:::::N::SQ:::::::S:::::::::::::::::::T::R::::::A: consensus RRVSSFDDL------S-SG---- #oth 3.143242311111165223322 NP1762A H:L:RV:E:::::::A:--:::: rrnAC1706 :::A:LL:::::::::S:QGR:: Hmu2257 :::TG:GEM::::::::--:::: HQ3343A Y::D:L:II::::::-:--:::: hla1189 ::::RL:E:::::::LAG::::: VNG1772 H:::::A:V::::::FP::DGDA HVO_2307 Y::E:::::::::::VR:::::: Hbo1993 V::ET:E::RNRRVATDG:FVVD