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[K] (RPB10) COG1644 DNA-directed RNA polymerase, subunit N (RpoN/RPB10)
8 genomes BUD1016 8 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG1140

rrnAC0067

HVO_2776

Hbo2513

Hmu1265

-

hla1416

NP2842A

HQ2937A

Pairwise sequence scores
Consensus score518 VNG1140 rrnAC0067 Hmu1265 HQ2937A Hbo2513 hla1416 NP2842A HVO_2776
453VNG1140 541 425 413 437 434 443 433 443
486rrnAC0067 425 534 522 425 467 465 446 436
474Hmu1265 413 522 532 421 463 453 434 424
448HQ2937A 437 425 421 529 457 468 444 467
499Hbo2513 434 467 463 457 521 482 457 469
493hla1416 443 465 453 468 482 526 460 455
470NP2842A 433 446 434 444 457 460 514 474
468HVO_2776 443 436 424 467 469 455 474 518

68 symbols
consensus       MMIPVRCFTCGNVVGEHWEEFKARA--REGDE--DPAKVLDELGVERHCCRRMLVSHKDL
#oth            ..1.....1..1.11...21..2.1111112.111.22...1..13.1.....111.2..
VNG1140         ::V:::::S::T:::::::A:::::ETHD::::::::D:::D:::D::::::::IA:Q::
rrnAC0067       ::V:::::::::::::::::::::T::::AE:PE::E:::::::::::::::::::::::
Hmu1265         ::V:::::::::::A:::::::::T::::AE:PE::E:::::::::::::::::::::::
HQ2937A         :::::::::::T:I::::D:::Q:::::D:N:::::GE:::D::IK:::::::M:::R::
Hbo2513         ::::::::::::::::::D:::::::::::::::N::::::::::::::::::M::::::
hla1416         ::::::::::::::::::::::E:::::::::::::G::::::::D:::::::M:::R::
NP2842A         ::V::::::::T::::::G:::E::::::::::::::E:::::::::A::::::::::::
HVO_2776        :::::::::::T:I::::D::::::::::::::::::E:::D:::T:A:::::M::::::

consensus       VDVVSPYQ
#oth            ..1.1...
VNG1140         ::::::::
rrnAC0067       ::I:::::
Hmu1265         ::I:A:::
HQ2937A         ::::A:::
Hbo2513         ::::A:::
hla1416         ::::::::
NP2842A         ::I:::::
HVO_2776        ::::::::