|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1588 | HVO_1243 | Hbo0303 | HQ2375A | pNG7057 | VNG0150 | NP3912A | Hut0617 | NP1608A | hla1625 |
1011 | HVO_1243 | 1668 | 982 | 626 | 719 | 754 | 661 | 645 | 622 | 669 |
980 | Hbo0303 | 982 | 1604 | 673 | 718 | 775 | 547 | 638 | 562 | 677 |
916 | HQ2375A | 626 | 673 | 1684 | 817 | 757 | 455 | 567 | 533 | 595 |
1007 | pNG7057 | 719 | 718 | 817 | 1602 | 887 | 554 | 593 | 580 | 632 |
1047 | VNG0150 | 754 | 775 | 757 | 887 | 1603 | 594 | 629 | 597 | 650 |
795 | NP3912A | 661 | 547 | 455 | 554 | 594 | 1648 | 581 | 667 | 691 |
894 | Hut0617 | 645 | 638 | 567 | 593 | 629 | 581 | 1614 | 720 | 697 |
817 | NP1608A | 622 | 562 | 533 | 580 | 597 | 667 | 720 | 1575 | 706 |
922 | hla1625 | 669 | 677 | 595 | 632 | 650 | 691 | 697 | 706 | 1580 |
246 symbols consensus ----------MADIALAG-------TVAFAVGAGVATFFAPCAYPLLPGYVGYYVAAEDA #oth 11222223334645424211111113321.231.23..11..111.....111.364745 HVO_1243 MPGFGLGPALGF:S:F::::::::::L::::S::::::::::::::::::::::LSS:E: Hbo0303 :::::::MQMA:SG:F:::::::::::::::S::A:::L:::::::::::IS:::GRD:S HQ2375A ::MSISFLSIIEQ:::F:FKTKVVSIL:::A::::::::::::F::::::I:::FNQPKT pNG7057 :::::::::::::V:VL:::::::::L:::AS::I::::::::F::::::I:::LRESGG VNG0150 :::::::::::SALP:G::::::::AA:::A::::T:::::::F:::::::::::TER:S NP3912A :::::::::::L:W::G::::::::::GW:FA:::M::::::S:::::::::F:::QQET Hut0617 :::::::::::SGLTFGA:::::::::::::TT:AT::::::::::::::::::MQ::SR NP1608A ::::::::::-MAVE:Y:::::::::I:::F:::IV::::::S:A::::::::::::TED hla1625 :::::::::::T::S::T:::::::N:P:::T:::::::S::::::::::::F::NSV:: consensus DSG----GALARGAAAAVGALVTLGLVAGAAVAAGRPLLAALPLLEPLVGVALVVFGVLM #oth 363442133533142.24113332342242345325446541343.331.431333.225 HVO_1243 :L:::::::VV:::V:SLA:::V::AIGS:LAVV:GRIASH:A:::::::A:::G::::: Hbo0303 :T:::::::IV::T:::I::::V:VT:::VLFT::TAVVSH:T::::II::::I:L:A:F HQ2375A P::::::--:LS:VT::S::V:M::V:::LTAII::R:TTI:::F::VI::::II::::L pNG7057 :V-::::SM:PPAT:::G:::AA:T:::LLVL:L:Q::KN:::M:::VI:LG::::::V: VNG0150 :I-::::AVV:AA:::::::IT:::A:::VVL:::Q:VK::::AV:::I:LG:::V:::T NP3912A :APLA:::VA::::::GL:VFSVVAVISA:::FVDGSQ:EYISVF::::::VFLLA::AV Hut0617 EG:ALLT:::V::L::S::V:::F::L:V::ITV::::Q:H:ST::LV:::L:ML::LVT NP1608A Q:PPMA::VF:::I:::G:V:A:FAILSV:::V:SDHIEQ:::AA:WF::FL::G::LAI hla1625 ::ASVL:::G:::L:::::V:A:FA:L:::T:RI:YST::NITVF:T:::GL:I:::L:V consensus LLGRTPSLHVPLPERRASVFGFGVFGAVYALAAAGCVVPVFLGVVTQALALPAPGAAAVL #oth 45234354334.13123226..33..12.12.131.13.3132.3412232256523421 HVO_1243 FT::A:::::V:::Y:S::T::A:::G::G:::::::::I:::::::S::::T:Q:VVS: Hbo0303 A::HA:T::MQ:::::S::G::A:::G::::::::::::::V:::::S:T:STGK::I:: HQ2375A WVEW::T-TIS:TR:PD:LV:::I::::::V::::::I:LS:::::::VS:SPTN::::: pNG7057 ::N:E:E:R::::::P:::A::::::::::V::::::::L:F::::::::::VHTSIL:: VNG0150 AA::G:RIT:V::::P:::V::::::G::::::::::::::I::IG::VEH:L:::VT:: NP3912A :S:VSSPVS::::K:::::L::W::::G:G:::VA:LA::::S:LV:G::::::E:TL:V Hut0617 :S:::VGW:AR::::TT:IS::VG::GL::I::T:::A::::A::S:::TFGPA:T:::: NP1608A VT:::G::::S::Q:::T:::::L:::::::::LA::L:M::A:TV:S:TFS:V:T:V:: hla1625 VF:::::IS::::K::TG:::::L:::G::::G::::A:::::::AR:I:::SET:VIL: consensus GAYAAGVAVPLVGVTVAAAVGVDAWRD-LGAYTGRIQRIAGVVMVAAGLGQIYLALFVLG #oth 43.12342311432.11423.555555133635544433.122113..42.242235533 HVO_1243 :::::AA:L::SV::::::L:G:RI:S::SG:V:SV:KA:A::::L:::W::W:::SF:: Hbo0303 L:::LS::A::AA:::LG:L:SY:F::::SK:I:SV:::::::::L:::W:VVIS:QF:: HQ2375A FT::::::L::I:::LL:ES:LT::QR:::H:::::EQ::AGLL:T::A::L::SIV::D pNG7057 T:::L::S:::::::LL:G::IGL:HT:V:T:LQ:MHQV:A:::IL::G::::::V:E:: VNG0150 :V::::::A::::::LL:GA::::::E::::::ES:E:A:::::::::V:::VVG:GQVS NP3912A :::GGAT:GL:TLA:::I:::::T:E:RT:WLMRHSKQ::::LL::::I::LL::ASDY: Hut0617 :G::::M::LMI:A:::V::::EITT:RFAGLAD:MTP:::GIL:::::A::A:::::YS NP1608A A:::G:FG:LM:VA:::I:::H::VTTR:ADR:NALT:L::AIL:V::V::L:I:AT--- hla1625 AV::GT:::LMAAT:::TG::LISNANRVM:HA:TLK:L::A::IV::V::L::S:V:Y- consensus VV---- #oth 531111 HVO_1243 H::::: Hbo0303 W::::: HQ2375A :L:::: pNG7057 :F:::: VNG0150 A:GVSL NP3912A GF:::: Hut0617 :-:::: NP1608A --:::: hla1625 --::::