| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 2378 | VNG1067 | HVO_1529 | NP1916A | Hmu1106 | hla2264 | HQ2692A | Hut1232 | rrnAC0430 |
| 1580 | VNG1067 | 2548 | 1658 | 1183 | 1209 | 1214 | 1230 | 1209 | 1218 |
| 1499 | HVO_1529 | 1658 | 2423 | 1219 | 1109 | 1225 | 1217 | 1156 | 1239 |
| 1530 | NP1916A | 1183 | 1219 | 2353 | 1227 | 1234 | 1285 | 1203 | 1273 |
| 1613 | Hmu1106 | 1209 | 1109 | 1227 | 2384 | 1305 | 1340 | 1387 | 1460 |
| 1825 | hla2264 | 1214 | 1225 | 1234 | 1305 | 2356 | 1794 | 1478 | 1535 |
| 1823 | HQ2692A | 1230 | 1217 | 1285 | 1340 | 1794 | 2576 | 1465 | 1483 |
| 1724 | Hut1232 | 1209 | 1156 | 1203 | 1387 | 1478 | 1465 | 2386 | 1548 |
| 1808 | rrnAC0430 | 1218 | 1239 | 1273 | 1460 | 1535 | 1483 | 1548 | 2539 |
354 symbols consensus ----------------MKVSVVVCTYTMDRYEHFREAVESVLAQTYDDVELVLVVDGNDD #oth 111222222222121212....2.211121123152111..2.1.1112.31211..243 VNG1067 MPQSTILIQAPVTFPM::::::::::S::::GP:AD:::::::::H::L:V::::::::: HVO_1529 ::::::::::::::::::::::::::S:E:::S:S:T:::::::::EPL:::I:::::EE NP1916A :::::::::::::::::D::::::V:S:::F:S:V::::::::::::PI:AI::::::QA Hmu1106 :::::::::::::::::R::::I:LH::::FD::V::::::F:G::::::::::S::S:A hla2264 ::::::::::::::::V::::::::::L:M:::::::AD::::::H::::::V::::TPE HQ2692A ::::::::::::::::::::::I::::LNM::::C::AD:::::::::::I:VI:::TP: Hut1232 :::::::::::::::::R::::I:LH:L:::DD:T::::::R::::::::::::S::S:G rrnAC0430 :::METPNSTGGTPPT:R::::L::H::E::DDC:A:A::::::::::::::::S:::R: consensus VYERVRDDFGDRDDVVIHCNDENRGLLESRNRGAEIASGDVVAFIDDDAIADEDWIERLV #oth 123235311.232123331121.3.2231.15.13311.11..12...12.224.224.1 VNG1067 :F::::A::::EEH::L::::::Q:ISY::TK::K:::::I::::::::T:ED::::Q:L HVO_1529 EFD::Q:::::I::::L::::::::ISY::TK:::LGT:::::M:::::T:EP::::T:: NP1916A :::::A:R::::::::V:::E::::VSV::TH:::L:::::::::::::V:EP::::H:: Hmu1106 :CGAIE:R::::A::Q:V::E:::::AV:::::LDA::::::::T:::V::::R:L:A:: hla2264 :::Q:V::Y:::E::::E:::::V::::::::::A::::::::::::::::::A:V:::: HQ2692A :::::I::Y:::E:T::K:::::L:::Q:::Q:::::::::::::::::::::V:V:::: Hut1232 :F:QF:T:::ED::ATLVKLA:::::::A::A:::A:::E::::L::::::AP:::D::: rrnAC0430 ::KQYQS:::N::::LT::::A:V:::::::N:::V:T:::::::::::::::E:VAA:: consensus RAYEER-DAVAVGGRMTPEWVAGKPSFLPAEFYWLVGVTHRGFA-----DGGGEVRNTFG #oth 42.1351.33.1..32112.2132.211.2..1..1.13211.11321325521....11 VNG1067 GV:A:T:::I::::DVV:D:QTQ::D:F:::::::::CVEP:::::::::D:E:::::Y: HVO_1529 DT::NNP:::::::TVV:D:::R::E:F:E:::::::CDE:::G:::::EHME:::::Y: NP1916A E:::KH:::::::::::G::L::R:::::D::D::::::::::::::::::RT::::::E Hmu1106 SV::::::VP:::::LV:::::DE:DY::::::::I::MPPT:GPADDASV:::::::Y: hla2264 :::::E:::I:A::K:::A::::::::::E:::::I:::::::::::::::P:::::::: HQ2692A ::::::::T:::::K:V::::::::::::E:::::::::::::::::::::S:::::::: Hut1232 E:::::::SL::::K::::::::::D:::::::::::::::::GPGGDM:AA:::::::: rrnAC0430 D:::QQ:::L::::::::A::::::::::::::::I:::::::GPNGDP:EP:V:::::: consensus SNISFRRDVFLELGGFDPNIGGRKGDKNLQGGETELCARLREEYGRGVWYTPEAEVAHKV #oth 1.1.1322111211.114321.12.1222122111211.23321132141422.3.4..2 VNG1067 ::::Y:::Q::DV::Y:::T-::::::H::AH:APVGI:::::::::MVF:RD:R:H::L HVO_1529 :::::K::::::V::Y:T:T-::::::HV:AH:APV:I:IY:QT:ER:I:NKQ:R:N::L NP1916A :::::::E:::D::::::EL-:PT:EEYRHSEGA:IG:::EA::D:::M:I:::I:R::: Hmu1106 G:M::L:S:LED::::E:E::::T:::::::E::::::::QT:::::MY:::D:I::::I hla2264 ::::::A:::EV:::::VD::::::::::::::::::::M:::::G::::D::::::::: HQ2692A ::::::TS::E::::::A:::::::::::::::::::::MQQ:::HA:::D::::::::: Hut1232 :::::::::::::D:::TK::::Q::A:::::::::::::::S::E::::V:D:::D::: rrnAC0430 :::::D:::::::::::DD::::Q:E:::::::::::::::T::DE::Y:::::L::::I consensus FDYRTELGWLLDRAFWQGYSKRAMEVLVPDAGGEESDFLRDLLTRFVPRRLRNLVRRPSV #oth .21.1425..33.1.1..1...2123222444331441.5612345315.3351255112 VNG1067 ::::G:F:::VS:S::::::::V:DL:Y:::EDNK:SY:TQ:::::::T:A::::QS::: HVO_1529 :E::::FD::VF:S::::::::V:DL:Y:Q:SDDKNAY:K::MLVY:VD::K:::ED::L NP1916A :EH::R:S::CR:::E::V:::::KRRTDGSSA::FG:::S:FLEHL:::::E:IDE::: Hmu1106 ::::::::::::::::::::::GL:::::ETD:T:::Y:AT::FVAT:::::G:LTE::L hla2264 :E::::FR::V::::::::::::::SF:E:E::::GA::KYI::NTT:::VKR::S:EPL HQ2692A :::::K:C::I::::::::::::::SF:DNE:N::KE:::E:M:SV::I:I:SMISN::T Hut1232 :A:::G:W::::::::::::::::::::E:D::::G:::GL::G::::A:VSQ:I::::: rrnAC0430 :::::DP:::::::::::::::G:::F::EST:::::::S:::F::A:E:IWG:::A::: consensus AGVQQLVMLFVFTGAVGFGYLYGLLTWN-------------------------- #oth 343612442221.24..4..2126552442443231111111111111111111 VNG1067 QRL::::AI::::A:::L::V:AIA:P:LVAHANS::::::::::::::::::: HVO_1529 :Q::::IAI::::A::::::V:::::P:LVEKTNN::::::::::::::::::: NP1916A :::A:I::::::::L::V:::FE-SA:GIVSR:::::::::::::::::::::: Hmu1106 :A:V::A:::::::V::L:::::AVK:-:::::::::::::::::::::::::: hla2264 TEIKLF::VYLL::L::::::::T::YSA::::::::::::::::::::::::: HQ2692A N:MS:FFG::L::FI::I::T:A:WD:DDDTLIQRSGDLSGSPGSSSNTHSEKT Hut1232 QR:T::LT:AL:::V::A:::::YTRY-:::::::::::::::::::::::::: rrnAC0430 :::L:F:F::AL:AF::::::::MTV:G::::::::::::::::::::::::::