|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 2168 | HQ1411A | NP5308A | hla0301 | Hut0152 | Hbo0934 | HVO_0587 | VNG1578 | Hmu0508 |
1199 | HQ1411A | 2222 | 930 | 1032 | 995 | 1151 | 1047 | 995 | 906 |
1297 | NP5308A | 930 | 2198 | 1034 | 1024 | 1069 | 1027 | 1022 | 998 |
1513 | hla0301 | 1032 | 1034 | 2445 | 1222 | 1189 | 1186 | 1121 | 1146 |
1461 | Hut0152 | 995 | 1024 | 1222 | 2415 | 1115 | 1100 | 1152 | 1097 |
1539 | Hbo0934 | 1151 | 1069 | 1189 | 1115 | 2267 | 1404 | 1149 | 1161 |
1536 | HVO_0587 | 1047 | 1027 | 1186 | 1100 | 1404 | 2199 | 1208 | 1198 |
1482 | VNG1578 | 995 | 1022 | 1121 | 1152 | 1149 | 1208 | 2228 | 1183 |
1494 | Hmu0508 | 906 | 998 | 1146 | 1097 | 1161 | 1198 | 1183 | 2284 |
362 symbols consensus -------MPVIAAL------------AVAVAAALDAAVAEPPARIHPVALLGRAVAPL-D #oth 111111134541443111111111112134131.15341...133....11.23134311 HQ1411A ::::::::ITLGSI::::::::::::::I::IG::TIIG::::F::::::F:QL:DIV:: NP5308A ::::::::NGSGL:L:::::::::::::::::::E:L:G:::::::::::::::::::GE hla0301 MATAPLLT::L:S:A:::::::::::TL:I:V:::L:L::::::V:::::F:SV:GRF:: Hut0152 :::::::VTI:::APGEFVVRIQPGIC::L:L:::G::G:::ES::::::F::MI::::: Hbo0934 :::::::V:LT:::::::::::::::::VL::G::V::::::::V::::::::L:SHA:: HVO_0587 :::::::V::T::A::::::::::::::VA:::::RGF::::::V::::::::L:S:V:: VNG1578 ::::::::TAA:VG::::::::::::::::GV:::::I:::::GC::::WF::::GVV:: Hmu0508 :::::::--:::PF::::::::::::T:LT::::ELLA::::::A::::W:::::::::: consensus RSWSRPRLVGAVAALALPLAAAGVAAALVAAATTVSPWLGA---AVAGLVLFTTTSLRML #oth .42441421.334.322.2321442345152156343432111143.23211323.1.2. HQ1411A ::YDS:NI::ILI:TT::IGFGI:T:TS:YVVFS:NSQ::::::FA::C::::LI:::L: NP5308A ::F:W:A:A:T:::VGV:A::::::YLT::::AALGAAAA::::VT:::::W::::::L: hla0301 ::::::::::VAV:VG::IGV:AF:GGI::::SFAL:AFS:LPVL:::TI::::V::::: Hut0152 :E:PFS:A::TSI:::A:::V:FL:WL::EF::::-:V:SS:::I:::::::S:L:::R: Hbo0934 :T::H:::::V:L:::A::GF::::GGV::::E:L:::V:::::LF:S::::AA:::::: HVO_0587 :E::::T:::::::V:::AL::::T::VTW:::L:::::::::::::A:A::S::::::: VNG1578 :P:T::LA:::L::I:::::::ATVW:A:TV::WG:ALA:::::V:::::V:V:::R::: Hmu0508 :A:R::::::::G:::V::T::VAV:V::V::GRA:T::A:::::A::GA::VA:::::: consensus LAAAADVIEAT--ETDLDAAREELRALAGRDASSLSAADIRSAAVESAAENLADGLVAPL #oth .442341263222431231.15311..1...144.11242...1...3....1..111.. HQ1411A :RTVH::VMM:::TA:VS:::Y:::::::::::E:D::H::::::::::::::::FIG:: NP5308A :SS:::::::S::DN:PA::KAA:P:::::::A:::PPLL:::::::L::::S::::G:: hla0301 ::TT:E:V:L::::::P:::::SV::::::::TD::P::L:::::::::::::::F:::: Hut0152 :TR:R:::DVS::R:::ET:::R:P::V:::P::::PPL::::S:::L:::::::F:::: Hbo0934 :D:VR::TQ:A::::::::::T:::::::::::A:D::HV:::::::V::::S::::::: HVO_0587 :D:::A:VS::AD:S:::T::Y:::::::::P:::::::::::::::::::::::::::: VNG1578 ::E:SG::A::RT:NS:::::RR::::::::PDA:::GEL:::::::T:::::::::::: Hmu0508 :SE:RST:G::::S:::::::GS:::::::::GP:::GQV:::::::::::::::::::: consensus LAFAL---------GAPV-SLPL--GAAAAAWVKAVNTLDSMLGYRSKPVGWASARLDDA #oth 41.32122112122314221123111112.112.11..1...1..12122.211.....3 HQ1411A :::T::::::::::F:::::VSI:::V:S::::::I:::::::::::::I:T:::::::I NP5308A S::VV:::::::::LSF:::::A::A:::::AF:::::M:::F::PGR-F:::::::::L hla0301 GG:::GATVGLAVG:SE::A:::AA:V:::V::::::::::::::::::::::::::::: Hut0152 :::T::::::::::::QL:::SV:::V:::V:I::::::::::::::::::::::::::L Hbo0934 F:::V:::::::::C::F:::::::A::::::::G:::::::F::::::I:::P:::::V HVO_0587 :::M::::::::::F:A::::::::AVG::::::G:::::::::::H::::RVP:::::: VNG1578 A:::V:::::::::::A:V:::V:::::::::::::::::::::::::R::T:::::::: Hmu0508 A::VAGVVVGQAAALS::PA:A:::::GG::::::::::::::::::::::::P:::::: consensus VMWLPARLTAVLLAVAAR--DPAALRRARAWAGAPPSPNSGWPMATLAAALDVRLEKPGV #oth 2.11...33131123312223343452126323423...1....113.12143.12..13 HQ1411A I::V::::::A::S:::GHPLLPLRQQV::D:AQTA:::A::::::I::L:PA::H::DT NP5308A M:FV::::S:A::GP::A::::D:PV:::RY:DK:A:::A::::G::::::N::::::DS hla0301 ::F::::V::GC:S:::G::SIE:::W:AS:::K:G::::::::::A::::::::::::H Hut0152 :::::::T::::I:L::::::FG::W:::G:R:::::::::::::::::V::T:F::::: Hbo0934 ::::::::AG:::::SVAEFSLPFSS:V:TL:RR::::::::::::M::V:PA::V:::: HVO_0587 :::::::VS::::::V:G::A::TVA:VGEL:RR:S::::::::::::VL:ET::::::H VNG1578 :::V::::A:::I:AT::::A:::VS::A:D::::::::::::::::::V::C::V:::: Hmu0508 :::::::IG:L:I:A::::::::::::::P:LDGV:::::::::GV::::HG:::::::: consensus YELNPAAS-----LPDAADATRAVRIVARAGGLAYALAA----AVAWL------------ #oth .5.23435111112.443526222241431.43.41324444332533223322221111 HQ1411A :::RTS::::::::::KSV::Y:IQ:TR:::VI:IV:TITILEGIT:::::::::::::: NP5308A :R::EL:::::::::A:::GQ::LSATR:::IA::VI::LVG:V:Q:::::::::::::: hla0301 :V:::D:::::::P:SVV::E::::L:GVS::V:V::::GWLL:TR::PAPAGVIG:::: Hut0152 :V:::D:T::::::::::A::::I::::I::TI:G:MSLLIA:S:QLSPGSLGLVAVGVG Hbo0934 :D:D::SDTANTR::TT:::MQ:::VTN:::L::F:::G::::VI::F:::::::::::: HVO_0587 :L:DGGPE:::::A::::T:A:G::L:S:::LA:F:V:G::::V:::F:::::::::::: VNG1578 :::RE::A:::::::GL:ESR:G::V:ST::::::::T:::::::VYAGGGGL::::::: Hmu0508 :A:DGGEQ:::::::STEISL:S::T::V:::::::::VVTTA::GG:P::::::::::: consensus -- #oth 11 HQ1411A :: NP5308A :: hla0301 :: Hut0152 SC Hbo0934 :: HVO_0587 :: VNG1578 :: Hmu0508 ::