|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 2653 | VNG0430 | HQ2392A | HVO_1390 | hla1857 | Hbo0161 | NP0372A | Hmu0794 | Hut1567 |
1094 | VNG0430 | 1710 | 833 | 858 | 790 | 885 | 940 | 918 | 982 |
1806 | HQ2392A | 833 | 3343 | 1548 | 1561 | 1833 | 1431 | 1432 | 1470 |
1825 | HVO_1390 | 858 | 1548 | 2630 | 1744 | 1651 | 1431 | 1454 | 1473 |
1969 | hla1857 | 790 | 1561 | 1744 | 2676 | 1804 | 1496 | 1513 | 1476 |
2037 | Hbo0161 | 885 | 1833 | 1651 | 1804 | 2959 | 1454 | 1563 | 1554 |
1834 | NP0372A | 940 | 1431 | 1431 | 1496 | 1454 | 2672 | 1658 | 1699 |
2018 | Hmu0794 | 918 | 1432 | 1454 | 1513 | 1563 | 1658 | 2854 | 1978 |
2003 | Hut1567 | 982 | 1470 | 1473 | 1476 | 1554 | 1699 | 1978 | 2809 |
452 symbols consensus --VGP------DAEFGFELLVCRWAERAWPPD---------------------------- #oth 134444222234411321141132114314144322222211111111111111111111 VNG0430 ::---::::::---------------------:::::::::::::::::::::::::::: HQ2392A MYEY:G::::::::::::::::::::QE:::RDTEIDAGD:::::::::::::::::::: HVO_1390 :::SDAADRDR:P::A:::R:::::::::H:::::::::::::::::::::::::::::: hla1857 :::T::::::::::::Y::::::Y::L::Y:GE::::::::::::::::::::::::::: Hbo0161 :::Y:G::::::::::::::::::::A::::GESSDAVARGSADSRTASEDDVEHGSTGN NP0372A ::---::::::MK::::::R::A::::H:Q:S:::::::::::::::::::::::::::: Hmu0794 MLA:EPRLAVANS::A:::H::Q:::::::::GD:::::::::::::::::::::::::: Hut1567 :VT:QD::::FH:::D:::G::Q:::::::::SD:::::::::::::::::::::::::: consensus ---GDRPVLVARQLGTKRRRWDTIVIECDPAGLAARAAFGERRLDSDLLHVVRHAPAEWA #oth 111556333221121125111112231323422421242254531111242443113313 VNG0430 :::--------------------------------------------------------- HQ2392A :::DNYA:VIS::R::RH:::::::L:::::::N::RQ::PQT::::::R:::W::ET:T HVO_1390 ::::P::AF:::::::RQ:::::V:V:V::EAF:::R:LSTDGF:::::R:::::::::T hla1857 ::::P::AV::::::::E:::::V:::V:::AF:::R:::D:TI:::::::::::::::: Hbo0161 WVKSSDA::::::::::::::::::::::::::::::Q::::E:::::::I::N:::::: NP0372A :::::GR:::::::::RS:::::VI::TTETA:TQ:::::PE:::::::F:AQ:::TG:D Hmu0794 :::R:S:::::::::::::::::::V:::::::RQ::N::RQ::::::R::LG:::T::: Hut1567 :::CEN:LV::::::::::::::::L:::RD::RQ::E::::A::::::D:IP::::::T consensus WYRDALPDPGYPWRYVREAVHRAADRGIIEKRRRG-NRIEIRRRAPYPDWVRRIVAIENK #oth 2111221512211121242212122224344126312122321554..3.23.11..... VNG0430 -----------------------------------:--------MA::E::::::::::: HQ2392A :::::I:Q:DF::::::A:::::::::::NT::Q:::::::K:V:T::R:L:::I::::: HVO_1390 :::::I:E:DF:::H:VP::::::GL:LV::::GSR::V:Y::T:::::::E:V:::::: hla1857 :::::::H:::::::::Q::::::G:EL::::::N::::QL::KR::::::K:::::::: Hbo0161 :::::::Y:::::::::A::::::G::VV::::K:::::::::I:::::::::::::::: NP0372A Y:::C:::::::::::::SI:::::::F::T::D::::::::::YR:::::D:::::::: Hmu0794 Y::::::::::::::::::I:T:::::VLDR:K:::::::::::HA::::IE:::::::: Hut1567 Y::::::::::::::::::I:::G::::LAV:KS::G::::::KSV::S:IE:VI::::: consensus PDLDASAARALADQLERDVALGLADEVWVATEA-TGERVEPALLEDLPVEAGILAVDFDA #oth ....1...12.24.141..332....1.1..45113431112..332.121.1.321324 VNG0430 ::::::::D::TT::R:::::::::::::::ADDAAGG:QR:::A:::::::::VF:D:- HQ2392A :::::::::::S:::Q:::DTA:::::::::T:::NNE:::V::K:::A:V:::TF:::: HVO_1390 ::::::::::::::::H::SRA::::::::::V:::R:::::::::::::V:::G::D:S hla1857 ::::R:::DR:::::AH::ETC::::A:L:::T:::::::::::REM::::::::T::EG Hbo0161 :::::::::::SG::T:::ETA:::::::::H:::DN:::::::::V:::V::::FS::: NP0372A :::::::::R::E:::H:::::::::::L::NT:::DDI::::::AM::DV::::::A:G Hmu0794 :::::::::R::P:::::::::::::::::::R::D::I::I::::::AA::V:T::PST Hut1567 :::::::::H::P:I:::::M::::::::::AE:::::I::::::NV:::::::V::PS: consensus GA-------ADVAWHPSDLAPA----------EPGARETERP----D------FEYVD-- #oth 5533221221314.3.44143311111111115434156424432433423322223233 VNG0430 --::::WT:VT:E:L:HG::T:::::::::::AS:T:L:S::ADGA:RPATG::::::AD HQ2392A D:HHTEWAE:S:I:::TR:N:TTTRNVSTHGIT:QK::K:TETSRMQEDAMHNSASDSQT HVO_1390 --::::::::E:L::::S:S:V::::::::::SED::-----::::-::::::-----:: hla1857 :VGADA:::::::::::::::::::::::::::HER:DP:TV::::-::::::-----:: Hbo0161 S:PGDEWAD:T:E:::::VT::::::::::::DAE:D:DR:-::::-::::::-----:: NP0372A IH::::::::ERV:N:RT:DAS::::::::::S::V:P:D:CDGRI::::::::::A:AD Hmu0794 VE::::::::::::Y:QS::VS:::::::::::::T:IV::::::D:DLSAAR:::::PE Hut1567 :D::::::::::::N:RT:D:S::::::::::K::V:ILD::SGGDHDASAAR:::::PE consensus WKA-----------------RKRLEIAERAYERGWRSYADTMRPDCRHFELRREGRGLVP #oth 2231111111111111111153.141....123...212111.....1.2143525243. VNG0430 ::::::::::::::::::::HT::A:::::F:::::::V::::::::Q:R:VDGAH:Y:: HQ2392A SEIPAAIDSDTNEVINTEQY:Q::IL:::::GA:::::HE::::::::::IQ:F:D:II: HVO_1390 ---:::::::::::::::::-R::VL:::::D::::N:V::::::::Q:::D:R::A::: hla1857 ---:::::::::::::::::TR:::::::::GK::::F:::::::::::::::N:QA::: Hbo0161 ---:::::::::::::::::TT:::L:::::GS:::::H::::::::::::::F::A::: NP0372A ::Q::::::::::::::::::::::::::::::::::::E::::::::::::DPA-:PF: Hmu0794 ::::::::::::::::::::E::RS:::::::::::A:::SL:::::::Q::T::DSV:: Hut1567 ::::::::::::::::::::Q::R::::::::::::::VES::::::::::SW:EP:PT: consensus YCAAKEREQTAAECAGSCADFEPEPPAWRTKGWPIEGGPGAGIKRLLARRRE--RER--- #oth 5.1..42511231.323.5221....4..341..13....232442.332.321.3.111 VNG0430 A::::A:::S::::G:::::Y:::::G::QH::::::::::TVQAV::D::Q:::R:::: HQ2392A :::::Q:S::::::::D:SE::::::N::MR:::LD:::::R::K:::T:::RV:::EVS HVO_1390 R::::DCY:SQR:::H::PS:::::::::MN:::::::::K:VR:I:EA::::::::::: hla1857 ::::::TVP::R::S::::S:S::::Q:::::::::::::K:LELV:D:::::::::::: Hbo0161 H::::G:P::::::::::P:::::::V:::GE:::A::::K::::::RD::GWV:::::: NP0372A W:::::::P::T::S:R:V::::::::::S:E::LS::::RAVSQ::D:K:Q:::R:::: Hmu0794 ::E::::VP:PST:RSG:REC:::::::::G::::D:::::::R:::DDQ:R:::H:::: Hut1567 F::::D:R::::::R:::GE::::::V::::::::::::::A:::::::::R:::Q:::: consensus ------------------------PG-D---- #oth 11111111111111111111233442545524 VNG0430 ::::::::::::::::::::::::--:-:::E HQ2392A DLNPNSSQHSSSAPVDTSIADNNSSEENSQSK HVO_1390 ::::::::::::::::::::DRAE::SENA:: hla1857 ::::::::::::::::::::DRVAD:::GESD Hbo0161 ::::::::::::::::::::EYANE:T:RDSE NP0372A ::::::::::::::::::::::::--:-:::: Hmu0794 ::::::::::::::::::::::::::L:DGTG Hut1567 ::::::::::::::::::::::::::MK::::