| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 2459 | HQ3106A | VNG2059 | NP2248A | Hmu3130 | Hut2931 | hla0428 | HVO_1903 | Hbo1782 |
| 1357 | HQ3106A | 2300 | 942 | 941 | 1111 | 1141 | 1079 | 1146 | 1126 |
| 1240 | VNG2059 | 942 | 2106 | 870 | 952 | 1043 | 1026 | 963 | 968 |
| 1366 | NP2248A | 941 | 870 | 2495 | 1251 | 1210 | 1093 | 1178 | 1086 |
| 1714 | Hmu3130 | 1111 | 952 | 1251 | 2627 | 1470 | 1319 | 1399 | 1285 |
| 1744 | Hut2931 | 1141 | 1043 | 1210 | 1470 | 2926 | 1391 | 1396 | 1162 |
| 1770 | hla0428 | 1079 | 1026 | 1093 | 1319 | 1391 | 2506 | 1503 | 1319 |
| 1882 | HVO_1903 | 1146 | 963 | 1178 | 1399 | 1396 | 1503 | 2586 | 1509 |
| 1675 | Hbo1782 | 1126 | 968 | 1086 | 1285 | 1162 | 1319 | 1509 | 2254 |
378 symbols consensus ------------------------------------------------REFAFELALCAA #oth 111111111111111111111111111122222112221222333323312311222233 HQ3106A ::::::::::::::::::::::::::::::::::::::::::::::::------------ VNG2059 ::::::::::::::::::::::::::::::::::::::::::::::::------------ NP2248A :::::::::::::::::::::::::::::::::::::::::::::::M::::::::VA:S Hmu3130 ::::::::::::::::::::::::::::MLFGVVAAPFLTVAALDDGV::::::VG::R: Hut2931 MGEGSEPCGKTLLPVGRTDGSHHWRGRRPIREAVAETLLCLAIREPSV::YG::::::G: hla0428 ::::::::::::::::::::::::::::::::::::::::::::::::M::R:::::::: HVO_1903 ::::::::::::::::::::::::::::::::::::::::VPVPASSPS::::::::::R Hbo1782 ::::::::::::::::::::::::::::::::::::::::::::::::------------ consensus LE---D-LVARQLGA-----GRRIIDVCAIEPGPGFDERAAITDERIPPAAIEADVGPGT #oth 212442333111112324212412513253511251351341.3231.6312332113.4 HQ3106A --:::-:--------::MNP::::::I:GVV::SS::T:SM:::::::ER::AGPA:V:: VNG2059 --:::-:--------:::::-------------------M:L:SDT::R:VLD:P:PV:: NP2248A ::AAT:G:::::::T:::::RD::V:LVE:::::D:S::TSL:A:P:::L:::SA::V:: Hmu3130 I:::R:GI:::::::SVH:::::VL::VQ:::::A:E::::::P::L:I::V:::::::R Hut2931 :::DSER:L::::::HVH::::::A:IV::D:::E::Q:::::::T::::::D:P::::Q hla0428 :::SP:RV:::::::GIENP:G::V:::VLT::::::R:::::PD:::DP::::A::::E HVO_1903 ::QTT:W:P::::::SVASP:S:::::::VV::::::D::R:::RA::A::::S:::A:S Hbo1782 --:::-:--------:::::----M::::VH:::S::T::D::SRA::LR::TC:::T:E consensus AVRWRDAF-DCHPDRARAVADRAVEAGFFESERRNGREYVRQTARYPDDWFDRLVGIENK #oth 224443231.541432332414141411124121313431.231...33.2221412... HQ3106A S::RS::V::AS:QTTK::IEQ:LA:D::TI:HH::Y:HI:::T:::TE::::II::::: VNG2059 YE:VTRV:::GP:E:::::::AGA:T::LDVT::D:QQV:::PT:::E-:IGG:::V::: NP2248A :RDPVE:I::TD::H::S:::Q:I:::::TA:::GS:RH:::::::::-::AG:HAY::: Hmu3130 :RY:K::::::::E::ERALEL:S:R::::R::::::T:::::T::::-::::::AV::: Hut2931 :RPL::VLP:RR::ERHRI::::::I::::::::::DR::::V:::::A:::::L::::: hla0428 ::PLKK::::LP::::E:::E::A:V:YL:R:::D::PI::A::::::::VGS:TA:::: HVO_1903 ::F:::G::::::G:::RAT:::::V::::::::RS:::::RA::::::::A:::::::: Hbo1782 ::F:::::::::RNT::D:V:S::::::::::W:G::::::::T:::A:::G:::::::: consensus PDLGRPGDLERQLRTDVSLGLFDEVILATASHVTRAHLNRIPEAVGVWRFDPDTGER-EV #oth ...33..2.52..16.21.122.32212.311..1..1..1.23..11111213232121 HQ3106A :::K:::E:T:::QV:I::::::A:::::KT:::::::::::D:::::Q:N:::DN::TI VNG2059 :::E:::G:S::::H:A:::VL:YAVV::E::::G:::::L:D::::::V:F:RERPIRI NP2248A :::D::::::::::K::::A:::T:T:V:D:Y::G::R:::::V::IV:::AEH::T:T: Hmu3130 :::D:::::::::::::::AAV:A:V::::::::::::::L:AE::::::::E::D:::: Hut2931 :::::::::QT:::I:::::::::::::::::::G::R::L:::::I::::::::::::: hla0428 ::::T::::AA:::Y:AA:::::::V:::::Y:::::::::::::::::::::::::::: HVO_1903 ::::S::::L::::L::::AV::::::T:E:Y::G::::::::E:::::::::::D:::: Hbo1782 ::::D:::::::::::A:::::::I::::E:Y:::::::::::S::::::::ES:::::: consensus VREPTPLDPDEPGIELVEERALRTDVRPVSPAAKARARRRIAERAYGKGWRTYDLPGCAR #oth 312234143342.21343442322213212332.233.111...11.....4322.4.23 HQ3106A I:Q:AE:ATGT:::::GSDQSDH:EIH:::SKE:T::::::::::::::::N:T::S::H VNG2059 ::::ER::AAG::L:VLD:H:A::::::::G:::::Q::Q:::::H::::::FG:::::: NP2248A I:DAE::STETT::AIG:RSPA:V:IE:IPSER:TAL:L:L::::::::::PDG::P:TQ Hmu3130 R:::AQ:PV::::V:::AQEPG::EI:I::AQE:::L::::::::::::::S::::P:E: Hut2931 LK:::S:PT::W:L::I:RE:GQAA::::D::::::::::L:::::::::::FTW:A::: hla0428 :::S::FE::A::V:IR:::::Q:::AL:D::::::K::::::::::::::P-:P::::H HVO_1903 ::::R::S::ST:V:P::YHS:H:::AL::::E:RT::L:L::::::::::A:::::::: Hbo1782 ::DA:::::AS::::::A::P:::::EL::GER:RQ::L:L:::T:::::::::::T::N consensus ASTD------ADG--RPYCEHFDRVVDPGRECGPDCPGFEAADPPAVDADALRDERTPWV #oth 1334121122322112.2.542323141432.153.32224.11.4425352.23113.3 HQ3106A :E:Q::::::P::::::::TE::C:IN:AQS:DTE::AHTH:E::QYNKAKV::A:S::N VNG2059 :::G::::::DG:VTL::::::::::::A::::T:::::AD::::::AL::E:ER::R:E NP2248A :DARGPPFASD:A::L:::QWKG:F:H:T:::::::G:H:::E::PA:I::V:A:K:::E Hmu3130 C:P:::::::D::::L::::WKE:P:QANS::DSE:G:::P:E::E::::R::A:::::D Hut2931 CDP:GA::EP:AT::V:::TYH::I:N:VED::ES:::Y:S:::::::VE:V::S:S::: hla0428 :::T:::::::::::::H:NR:::I:::::D::AP:RAH:P:::::T:RGP::::::A:: HVO_1903 :RV::::::::::::::V:D:::H:::::S:::::::A:::::::EL:R:G::ES::D:: Hbo1782 ::VT::::::S::::::::A::N:::E:::D::D::QP:::::A:SL:::S::::::::: consensus ADPPG-AARRQSGLDRFL #oth 4.15.14521.31.1215 HQ3106A H::::::RY::::::::K VNG2059 R:AG::-RH::A:::Q:- NP2248A P::::::G:T:TS::D:- Hmu3130 P::E::R::::::::::: Hut2931 R::A::RQ:::V:::::E hla0428 :::T:DGP::::::S::: HVO_1903 :::::::V::::::::YR Hbo1782 S::D::V::::::::::W