|
Pairwise sequence scores | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1913 | NP2412A | rrnAC3467 | Hmu2481 | hla1636 | HQ3029A | Hut1122 | HVO_2636 | Hbo2206 | Hmu2099 | rrnAC3089 |
1517 | NP2412A | 1936 | 1456 | 1344 | 1308 | 1301 | 1402 | 1359 | 1336 | 939 | 1028 |
1520 | rrnAC3467 | 1456 | 2017 | 1579 | 1395 | 1336 | 1425 | 1381 | 1345 | 952 | 1047 |
1546 | Hmu2481 | 1344 | 1579 | 2081 | 1447 | 1344 | 1440 | 1410 | 1363 | 951 | 1022 |
1584 | hla1636 | 1308 | 1395 | 1447 | 2148 | 1379 | 1389 | 1463 | 1439 | 999 | 1109 |
1518 | HQ3029A | 1301 | 1336 | 1344 | 1379 | 1983 | 1393 | 1491 | 1505 | 996 | 1037 |
1552 | Hut1122 | 1402 | 1425 | 1440 | 1389 | 1393 | 1963 | 1477 | 1430 | 954 | 1077 |
1651 | HVO_2636 | 1359 | 1381 | 1410 | 1463 | 1491 | 1477 | 1967 | 1652 | 1007 | 1067 |
1620 | Hbo2206 | 1336 | 1345 | 1363 | 1439 | 1505 | 1430 | 1652 | 2018 | 1007 | 1028 |
1068 | Hmu2099 | 939 | 952 | 951 | 999 | 996 | 954 | 1007 | 1007 | 1799 | 1122 |
1152 | rrnAC3089 | 1028 | 1047 | 1022 | 1109 | 1037 | 1077 | 1067 | 1028 | 1122 | 1732 |
297 symbols consensus ---MGILSRASYVIRSKLNALLNRAEDPTETLDYSYEQLRDELQDVKQGIADLTTQKKRL #oth 111111.1.22111.112111..1211.312.1....11.....2122....1....... NP2412A :::::::::::::::::I::V:::::::H::::::::::::::::::::::::::::::: rrnAC3467 ::::::::::::::::::::V::::::::::::::::::::::::::::::::::::::: Hmu2481 ::::::::::::::::::::V::S::::S::::::::::::::::::E:::::::::::: hla1636 MAG:::::::::::::::::::::T:::::S:::::::M::::::::::::::::::::: HQ3029A :::::::::::::V:::::S::::::::::::E:::::M:::::E::::::::::::::: Hut1122 :::::::::::::::::V:S::::::N:S:S::::::::::::::::::::::::::::: HVO_2636 :::::::::T:::::::V:S:::::::::::::::::KM:::::Q::::::::::::::: Hbo2206 :::::::::::::V:::I:S:::::::::::::::::KM:::::Q::::::::::::::: Hmu2099 :::VSL:R:FGF:V::W:D:::::V:::VAE:::::::::::::EINR:::::::::::: rrnAC3089 ::::SL:R:FAFA::A::::::::TS:::AE:::::::M:::::::TR::::V::::::: consensus EIQKRRLEENVEKHNEQAREAVEQDRDDLARRALEKKKAKMSQIEDLEGQIADLQETQDQ #oth .11131.221..1113..12.2212.11..12.....23224.122.24.136.151.14 NP2412A ::::N::::::::::::::Q::::G:::::::::::::Q::Q::::::T::::::N:::N rrnAC3467 :::::::::::::::::::Q::::::E::::Q::::::Q::::::::::::Q:::SQ::: Hmu2481 ::::::::::::N::::::Q:I::::E::::K::::::Q::::::E:DS::QQ::SQ:EG hla1636 :::::K:D:::::::R::::::Q::::::::K::::::S::T:::E::::::K:ND::E: HQ3029A :M::::::::::::::::::::R:::E::::Q:::::Q::::::::::A:VSE::S:::D Hut1122 :::::::::::::::D::::::::G:::::::::::::Q::N::::::T:V::::GQ::R HVO_2636 :::::::::::::::D::::::Q:::E::::K:::::Q:::::::E::T:::S::::::: Hbo2206 :::::::::::::::::::Q::R:::::::K::::::Q:::N::::::S:::N::::::N Hmu2099 :MHRE::RAA:::YD:::Q::LR:E:EE:::::::::H:TSD:LAG:DE::DR::A:::: rrnAC3089 ::HRT::RS:::::DT:::A:LQEG::::::::::::QVNV:::TE:T:::D:::::::R consensus LVEKKNELQNRIEEFRTKKETMKARYEAAEASSRVSEAMTGAGDEMADVNRAIERAEERT #oth .142232.241112.1.2..11...11..1..2..2..21.1.23151131111..323. NP2412A ::::::::::::Q::::E::::::::::::::A::::::::::E::ENI::S::::RDD: rrnAC3467 :::Q:D:::KQ::Q:::::::::::H:::K::A::N::::::::::Q:I:Q::::::::: Hmu2481 :::Q:DQ::Q:::Q:K::::::::::::::::K::N::::::::::K::G:::::::::: hla1636 ::::::K:::::::::::::S:::::Q::::::::::::::V::::E::S:S:::::::: HQ3029A :::Q:::::::::::::::::::::::::::::::::::::V::::N::S:::D:::QE: Hut1122 :I:Q:::::SQV:Q::::::::::::Q:::::::::::::::::QFE::G::::::Q:Q: HVO_2636 ::N::D:::S:::::::::::::::::::::::::::::::V:::::::G::L:::::Q: Hbo2206 ::D:::::::::::::::::::::::::::::::::::VS:V::::G::S::L::::DQ: Hmu2099 ::QRQI::RG:::G:::H:::L:::H::::::A::A::F::V:GD:::::::::::T::: rrnAC3089 ::G:RA::SSQ::Q::::::::::::Q:::::A:::::F:::::T::::H:S::::T::: consensus EEMEARSAAMDELEDSGAFDDALSDKDSIDRELEEGRTEGEVDAELETLKAEMGKGS-AD #oth 13....12.11..523.22123222315112..24424443.14..31.13231534145 NP2412A :D::::A:::::::E:::::S:::NESDLEA::::V:Q::::E::::::::DA:VE::DG rrnAC3467 :D:::::Q:::::RED:VLESQI::ES:LE:::::V:QK:S:::::D::::::::AE:DG Hmu2481 :K:::::Q:::::Q:E:V:E:::::::QL::::::IQSK:::::::D:::::::::D::: hla1636 :D::::AE:::::::::::E:::::::::::::DSLS:NS::::::::::G:L:::EP:S HQ3029A D::::::E:::::A:T::::E:I::::K:::::SS:::DAA::S::A:::SDVDG:T:EE Hut1122 :::::::::::::R::::I:::I::Q:QL::::::V::S:A:::::::::S:V:DE::G: HVO_2636 D::::::::::::M:::::::::::::::E::::A:::SA:::T::G::::::::S::GS Hbo2206 D::::::::::::V:T::::EMM::::A::::::T::ANS:::T::::::T::::ST::E Hmu2099 :Q::::A::LE:::A:::L::V:AEG:E:::::DRRS::QR::R::DQ::TQL:HET:ER rrnAC3089 :Q::::A::LE:::A::QLESV:DEG::::Q::DRLSG:RA:EN::A::R:::DN:K:-- consensus ESS--------E--DADLELE----DVA---------DEEVEAELEELKNDED---- #oth 564644323222456434373345545431222222235311511232352353222 NP2412A :A-::::::::-:::PEV:::ETNEAA:::::::::::P:I::::DD::K:DE:::: rrnAC3467 D:GSSDA::::DVSE:E::Q:LADESTQVDVD:::::ES:::S::D:::E::Q:::: Hmu2481 :TTDESADA:::VTTD:::A:LAGGNGEGDVETPEVS:S:::S:::D::E::QS::: hla1636 DDAGESTDEEIDTEL::I:S:IDSD:LEADLDGDDDA::::DV::::SEV:A:EQRN HQ3029A T::TTA::::::SEGENKTNSESETS:S::::::::::PA::T:::::RD::NN::: Hut1122 :DAEADT:::::ADT::VD:G::::::E::::::::::AA::E:::T::DE:S:::: HVO_2636 S::KSAS::::-AS:::VDV::::T::::::::::::::K::::::::::ED:SSSS Hbo2206 AE:EAESENGS:TAS:::DE:LDEV::::::::::::E:D::::::::::ED:S::: Hmu2099 SQ-::::::::-::-------::::---:::::::::SVD:DGATS-------:::: rrnAC3089 ---::::::::-::-------::::---:::::::::--A::EAT:-------::::