| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 2162 | Hbo3956 | hla1354 | HQ2503A | hla2144 | NP4476A | Hut0777 | rrnAC1347 | Hmu1866 | HVO_1165 | Hbo0393 |
| 1062 | Hbo3956 | 2161 | 997 | 896 | 828 | 895 | 909 | 946 | 923 | 966 | 883 |
| 1210 | hla1354 | 997 | 2117 | 922 | 1010 | 1082 | 1051 | 1091 | 1046 | 1017 | 1050 |
| 1460 | HQ2503A | 896 | 922 | 2258 | 1128 | 1264 | 1258 | 1336 | 1328 | 1336 | 1343 |
| 1512 | hla2144 | 828 | 1010 | 1128 | 2987 | 1365 | 1274 | 1336 | 1290 | 1215 | 1273 |
| 1658 | NP4476A | 895 | 1082 | 1264 | 1365 | 2270 | 1399 | 1462 | 1489 | 1346 | 1401 |
| 1629 | Hut0777 | 909 | 1051 | 1258 | 1274 | 1399 | 2189 | 1531 | 1503 | 1400 | 1361 |
| 1744 | rrnAC1347 | 946 | 1091 | 1336 | 1336 | 1462 | 1531 | 2183 | 1730 | 1380 | 1487 |
| 1724 | Hmu1866 | 923 | 1046 | 1328 | 1290 | 1489 | 1503 | 1730 | 2251 | 1428 | 1502 |
| 1634 | HVO_1165 | 966 | 1017 | 1336 | 1215 | 1346 | 1400 | 1380 | 1428 | 2230 | 1466 |
| 1709 | Hbo0393 | 883 | 1050 | 1343 | 1273 | 1401 | 1361 | 1487 | 1502 | 1466 | 2286 |
397 symbols consensus --------------------------------------------------GGLQLQG--- #oth 111111111111111111111111111111111111122222222345553745453111 Hbo3956 ::::::::::::::::::::::::::::::::::::::::::::::::::-------::: hla1354 ::::::::::::::::::::::::::::::::::::::::::::::::::-------::: HQ2503A :::::::::::::::::::::::::::::::::::::MSTIFDLTTTPLQV:VD:S:::: hla2144 MRAADSTVYERPTASQGGARPRRHRLGRETRHRLGHRRNGRPARRRQARE:EVPPS:PGR NP4476A ::::::::::::::::::::::::::::::::::::::::::::::::MS:::LQT:::: Hut0777 ::::::::::::::::::::::::::::::::::::::::::::::MSSITFVP:V:::: rrnAC1347 ::::::::::::::::::::::::::::::::::::::::::::::::::-MM:V:-::: Hmu1866 :::::::::::::::::::::::::::::::::::::::::::::::MTQ:TPVVDD::: HVO_1165 :::::::::::::::::::::::::::::::::::::::::::::MNELVVP:::::::: Hbo0393 :::::::::::::::::::::::::::::::::::::::::::::::MSV:L:V::Q::: consensus --------------------------------AIARLLAGFGV-----P--YAGPLGSAI #oth 111111111111111111111111433221225335514543211122145534534533 Hbo3956 ::::::::::::::::::::::::::::::::MVMM::QQEPL:::FD:QQ:IS::V::V hla1354 ::::::::::::::::::::::::::::::::MLSLQFG:V:L:::::SAALT:I:F:VA HQ2503A ::::::::::::::::::::::::::::::::S:::::TRA:L::::::ETI::LA:Q:: hla2144 NHDRRARRGTRRRRQCRPDRNARKHGGAALMG:H:GT:GTVA:AGTLE:::FL:::TGLV NP4476A ::::::::::::::::::::::::AGR:::::F::DT:ETV::::::::PEL:::F:DT: Hut0777 ::::::::::::::::::::::::::::::::V:SD:::EQN::::::::::::AI::T: rrnAC1347 ::::::::::::::::::::::::::::::::PL:D::E::::::::::::A::SIA::V Hmu1866 ::::::::::::::::::::::::DPT:::::PL:QI::D:::::::::::::DSI:Q:L HVO_1165 ::::::::::::::::::::::::DGG::::::VG:V:TQQN:::::::::::ET::TLL Hbo0393 ::::::::::::::::::::::::NTGGGLYD::G:A:::::I::::::ESV:V:::RV: consensus T----FVVVFVLVYLLGKAVILPAVNRVLDSRGLDEHARKPLRKIVSIVVVFVAITVAFG #oth 43232133224333231154372315.625312415224513623265434121233113 Hbo3956 :TVVL:I:::AVI:::::YFLTR::E:T:EH::F::TLISLAVSTTVVITGVG:VAL:AT hla1354 L:::::L:G::G:L::::F:FV:::M:::G:::F::AV:SLGSSVANA::WVA::AIG:T HQ2503A A:::::IA::A:IFIG:RTI:IRLLE::::::DIEA:::::::R::V:AIG:::L:IG:: hla2144 VDAAI:L::V:AT:V:Y::A:A:L:G:LF:RQ:::::::R::Q:::AFL:L:AGV:A::: NP4476A VGVSL:GIA:I:L:VV::RF:::LL::::NA:D::R::KT:I::L:WL:YL::G::I::: Hut0777 :::::::L:LG::S:::R:TVQ:I:R:G:R:::V:K::SI:IL:LTRGLI::::VA:::Q rrnAC1347 V:::::::::::::I::::IV::I:D:S:K::D::T:::Q::K:V:::GI:::::S:::: Hmu1866 :::::::A::LAI::F:R:::::V:::A:KA:D::A::::::K:::::A::::G:S:::: HVO_1165 G::::L:LG:AV::IV::::VSS:L:::::R::A::::K:::M::ATL::A:::LGAG:A Hbo0393 A::::::AA::A:::::RI:VF:VL::MM:::S:ED::Q::::RVT:V:::::G:::::: consensus AAGYGNFLQSLATIAAAATLAIGFAMQDVIANFVAGIFIFTDKPFRIGDWIEWDGNSGVV #oth 3.22452.411.1311.21..1...2..114.....1..3312..311.....3112.1. Hbo3956 V::F:VV:AAF::L:G:LA::V:::A::L:::::::V::IQ:E::SV::::::S:::::: hla1354 M:::SA::SAF:VFGG:IA::V:::A::LLG::::::::LK::::EV:::::::::A:R: HQ2503A :::::::::::::V:::::::V:::L:::LK:::::V::YA:R::K:::::::N:HA::: hla2144 ::::QG::R::::::::::::::::L::::K:::::V::Y::R::::::::::Q:::::: NP4476A V:::DD::R::::::::::::::::::::LK::::::::::ER::K::::::::D:T::: Hut0777 M::F::::T:::::::::::::::::::::::::::V:::::::::::::::::DH:::: rrnAC1347 M:E:::::::::::::::::::::::::::S:::::V::Y:::::::::::::::::::: Hmu1866 ::QF:S:::::::::::::::::::::::LS:::::::::::::::::::::::DHA::: HVO_1165 F::L::I:::::::G::::::::::::::::::::::::::::::::N::::::::A::: Hbo0393 :::FE::::::::::::::::::::::::LQ::::::::::::::::::::::::::::: consensus EDISLRVTRVRTFDNELLTVPNSQLTDGVIKNPVAKDTLRLKFVFGIGYDDDIDAATDII #oth 21.21..1121..1..11....24.123112.1.13241.3213...2.3..125.321. Hbo3956 RE:Q::::KLD:::::RI:::::D:ANAAVI:N::N:RR:VSVG:::::E:::AQ:R:A: hla1354 :::D:::S::::::::RI::::GD:ANNAVT::::YE:::Q::::::::E:::AE::::: HQ2503A Q:::F::::::::N:::::::::T:::::::::::NER::MQVP:::S:N::::::SA:: hla2144 ::::F:::::::::::::::::HT::SD:V::::::K::::::::::D:E::V:K::E:: NP4476A :::::::::::::::::::::::::::N:V::::DA:K:::::::::::::::::::::: Hut0777 :::::::::I:::::::::::::H:::::::::::::E::M::T:::::::::::::E:: rrnAC1347 :::::::::::::::::::::::N:::::::::::::Q:::::::::D::::::E::E:: Hmu1866 ::::::::::::::::::::::::::::::::::::EQ::::::::::::::::S::E:: HVO_1165 ::::F::::::::::::::::::::::::::::::::K:::QVP:::::::::QQ::::: Hbo0393 ::::F::S:I:::::::::::::::::::::::::::::::QVP:::::G::::T:A::: consensus LEEAEAHDGILDDPEPSVRLTELGDSSVGLQSRIWISNPSRADFVKTRAEYVKAVKERFD #oth 3121343431133.2.11113..11.3.2.3113..54.212222231221135..11.. Hbo3956 ID:GSRIG:V::::::TAPV::::::A:V:SG::::-D:DESSYGAV::QF:E::::::: hla1354 V:K::::AE:::::A::::VV:::::A::::::W::GE:G:G:::RV:S:::TD:::A:: HQ2503A H:A:DD:AD::TE:::T:::S:::::A:T:::QV::D::::GRVA:A::Q::QM:::::: hla2144 V::::RS:A:::::A::::::::A::Y:::::::::DD::::::::A::D:::::::::: NP4476A ::::R:::::M:A:::::::::::::D:::::::::AS::::::::I:G::::R:::::: Hut0777 I:::::::D::E::A:::::V::::::::::::::::::::S:::::::::::T:::::: rrnAC1347 :D::RE:PE:M:::::::::V:::::::::::::::K::::S:::::::::::S::Q::: Hmu1866 :D::DE:E:::A::::::::I:::::::::::::::A:::::::::I:G:::::::Q::: HVO_1165 :D:::N:E::MTT:::::::::::::::T:K::::::Q::::::::::G:::T::::::: Hbo0393 ::::R:QPE:::::G:T:::::::G:::V:T::F:::::::::::::K:::TQR:::::: consensus EEGIDIPYPNRTLSGELEVAG-GSVAEPAD------- #oth 232121.1121223.3324346354356532211111 Hbo3956 A::L:M::::TE:::GI::TNV:AGE:ATGD:::::: hla1354 :A:::M::VH:Q:T:SV::I-:E:::DDE-::::::: HQ2503A QHE::M:::::::E::VTI:::::IEQS--::::::: hla2144 ::::S::F:Q::V::RN:W:EPS:FSAM:EAGVGGDS NP4476A :::::::::H:::T:GI:::D::P:::Q--::::::: Hut0777 :AD:N:::::::IG::::L::S:PL:TEE-::::::: rrnAC1347 A:D:NM::::::IG:G::MT:FDG:V::::D:::::: Hmu1866 :A::::::::::IG:G::L:NVDGLV::T:DD::::: HVO_1165 :::::::::::::::::S:G:AERL:QSN:::::::: Hbo0393 :Q:::::::::::::::T:::LEE::G:L:D::::::