|
Pairwise sequence scores | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3270 | Hut2061 | HQ3444A | HVO_0086 | Hbo1410 | NP0922A | hla0665 | HVO_0084 | Hut2058 | rrnAC2619 | Hmu2941 |
1931 | Hut2061 | 3575 | 2386 | 2347 | 2196 | 1407 | 1525 | 1494 | 1474 | 1553 | 1487 |
2144 | HQ3444A | 2386 | 3505 | 2588 | 2370 | 1540 | 1667 | 1663 | 1559 | 1604 | 1505 |
2218 | HVO_0086 | 2347 | 2588 | 3534 | 2662 | 1553 | 1745 | 1684 | 1574 | 1662 | 1576 |
2076 | Hbo1410 | 2196 | 2370 | 2662 | 3408 | 1514 | 1625 | 1620 | 1571 | 1585 | 1539 |
2312 | NP0922A | 1407 | 1540 | 1553 | 1514 | 4388 | 2639 | 2115 | 2033 | 2157 | 2079 |
2407 | hla0665 | 1525 | 1667 | 1745 | 1625 | 2639 | 4406 | 2098 | 2138 | 2208 | 2190 |
2432 | HVO_0084 | 1494 | 1663 | 1684 | 1620 | 2115 | 2098 | 3416 | 2069 | 2180 | 2177 |
2408 | Hut2058 | 1474 | 1559 | 1574 | 1571 | 2033 | 2138 | 2069 | 3347 | 2405 | 2352 |
2478 | rrnAC2619 | 1553 | 1604 | 1662 | 1585 | 2157 | 2208 | 2180 | 2405 | 3279 | 2480 |
2412 | Hmu2941 | 1487 | 1505 | 1576 | 1539 | 2079 | 2190 | 2177 | 2352 | 2480 | 3293 |
663 symbols consensus ----EATPL---------------------------------QVD-PSAIAEGVNLVWVL #oth 112457621111111111111111111111111111111111253134422521133.21 Hut2061 ::::--M:V:::::::::::::::::::::::::::::::::---:GGEV:S:::T::A: HQ3444A ::::-MI::::::::::::::::::::::::::::::::::::I::AG:::S:::N::I: HVO_0086 MGWAVVI:::::::::::::::::::::::::::::::::::::::::V::Q:::Y::I: Hbo1410 ::::MSV::::::::::::::::::::::::::::::::::::A::A:T::A:::N::I: NP0922A ::MI:::L::::::::::::::::::::::::::::::::::::EGAE:VVNS::YS:I: hla0665 ::MYSRS::WKRDSEHEHGRNALSIGRTFTRGDSRVTTGVLASI::::VL::::::M::A HVO_0084 ::::ML:::::::::::::::::::::::::::::::::::::T::LASVV::::::::: Hut2058 ::MI::L:::::::::::::::::::::::::::::::::::::E::::LTDAISN:::: rrnAC2619 :::MSY:A:::::::::::::::::::::::::::::::::::::::NVL::::::L::: Hmu2941 :::MTYEL:::::::::::::::::::::::::::::::::::SN::ES:V:::::L::: consensus VVTFLIFFMHAGFAMLEAGQVRAKNVANQLTKNLLTWSVGVLVFFLIGAGVSGLVGGLTS #oth 2.3......11...1..1....1...1.1.1..111.42.2441.22.322242314435 Hut2061 ::A::::::QP:::L::S::::::::G:V:M::MTD:TL:I:SY:I::F:F:V:IAT::: HQ3444A ::C::::::QP:::L:::::::::::G:V:M::MTD:TL::::::IV:::::SII:M::A HVO_0086 ::S::::::QP:::L:::::::::::G:V:M::MTD:AL::::Y::V::::ATI:::::: Hbo1410 :::::::::QP:::L:::::::::::G:V:M::MTD:IL:T:IY:VV::AIATI:::::: NP0922A T::::::::::::::::::::::::::::::::M:::::::VT:::::M:::N:T:QV:G hla0665 M:C::::::::::::::::::::::::::::::::::G:::::Y::::F:IE:VA::GGF HVO_0084 T:::::::::::::::::::::::::::::::::::::I::I::::L::A::SI:AA::: Hut2058 T::::::::::::::::::::::::::::::::::::::::T:::V::::I:::I::DPY rrnAC2619 T:S:::::::::::::::::::S::::::::::::::::::V::::::S:I:S:::TGSF Hmu2941 ::::::::::::::::::::::S::::::::::::::::::AL:::V::T:E:::::AGL consensus PG-AFD---AF------YAGDASAWIG-WLFGAVFAMTAATIVSGAVAGRAKLRAYVTYT #oth 5514466643253111155544541131.121......1.........1.1413..2521 Hut2061 GQ::ITPMDSLFG::::HF:G::G:V::::V:::::::::::::::::E:MNFK:::FVA HQ3444A ::T:L:LGS::A::::::IN:P:SY::::F::::::::::::::::::::MNFT:::FVA HVO_0086 :::G::VAA::S::::::I::SG:::D:::::::::::::::::::::E:MDF:::IVFA Hbo1410 :::P:SISA::A::::::VN:PT:::::::::::::::::::::::::E:MEFN:::LF: NP0922A V::EMGSLSM:GA::::GGESTLG::D:::YS::::::M::::::::::::::::::G:: hla0665 SP::--:::--::::::S:LSDGD::NS:::::::::::::::::::::::::::::A:: HVO_0084 GS::L:ITG::MSLYAPD:SATT::VD::::::::::::::::::::::::R::::L::: Hut2058 TD:::PFL:--::::::----DEEY:::::Y::::::::::::::::::::::::::::: rrnAC2619 AP:::-:::--::::::G:EA:NDYV::::::::::::::::::::::::::::::I::: Hmu2941 SW:QMN:::--::::::--:SS:G:VT:::::::::::::::::::::::::::::I::: consensus ALIAAVIYPVVTGLTWGGGLL--------------ALGLGFHDFAGGMIVHGMGGIAGLT #oth 323222....14.42.51251111111233122265632115....111..13..2...1 Hut2061 :AMT::::::A::I::D::::ALADNPANNGFIADII:V:YQ::::ATV::ML::L:::V HQ3444A :AMTS:::::::::::A::::::::::SADGFIGL:::V:YL::::ATV::MV::L:::V HVO_0086 :T:TGF:::::Q::::S::::::::::SSGGYIGA:::V:YL::::ATV::MC::V:::V Hbo1410 V:MT:I:::::V:F:::::::::::::SSGGFLGNV::A:YL::::ATV::MC::V:::V NP0922A F:V::I:::::A::G:Y::W:::::::::::::::GET::::::::::::::V::::::V hla0665 IA:S:::::::A:V:::::F::::::::::::::GGS::::T::::::::::V::::::: HVO_0084 I:::G::::::V:F:::::F:::::::::::::::-DA:::::::::::::::::::::: Hut2058 F:L::::::::::I::V:EYI:::::::::::::AVGDAV::::::::::::L::::::: rrnAC2619 F:L:::::::::::::A:AHI:::::::::::::SLG:VV:K:::::::::::::::::: Hmu2941 V::::::::::S:MS:YD:G:::::::::::::::LA::::A::::::V::::::::::: consensus AAYMLGPRMGRFDEDGSANVIPGHSMTFAVLGTLILAFGWYGFNVGTAATVLSAA-DGAL #oth 1.222.2.22.1451.33211....111.....12.1..........3145345433144 Hut2061 G:::V:::K::Y::N:NSRP::::::LL::::::F::::::::::::SGIY----::::N HQ3444A G:K:V:::KT:::SN:NSQP::::::LL::::::F::::::::::::Q::::A::::::: HVO_0086 G:K:V:::K::::SN:NSQP::::::LL:::::::::::::::::::Q::::A:TDS:G: Hbo1410 ::K:V:A:K::Y:AN:ESQP::::::LL:::::F:::::::::::::Q::I::V:D::S: NP0922A :::V::S:I:::ND::::::M:::::::::::::M:C:::::::::::::A::LG::S:F hla0665 :::::::::D:YAK:::T:::::::::::::::::::::::::::::T:::F:VTES:E: HVO_0084 ::WII::::D::KP::T::::::::I:::::::::::::::::::::::AP:AY:::::V Hut2058 :::I:::::D::G::::P::::::::::::::::M::::::::::::::VFAE:GPN:D: rrnAC2619 :::V:::::::YN::::::::::::::::::::::::::::::::::::S:FVVE::::: Hmu2941 :::V:::::::YN::::::::::::::::::::::::::::::::::::::F:IE:E::I consensus -ALGGAA----LGRVALTTTLGMAAGAIGAGLVSWLKTGKVDTLYVANGLLAGLVAVTGI #oth 14133441114211.114..21.13.142.233145313.1.1.13...2.....11.12 Hut2061 ::FL::Q::::::::::N::::::G::LA:M:::TTWQ::P:P:WT:::::::::::::A HQ3444A :SFN:G:::::::Q:V:N:::::GG::VA:MI::ASWQ::P:P:WA:::::::::::::A HVO_0086 :EFM:::::::::::::V:::::G:::VA:MI::TSYQ::P:P:WM:::::::::::::A Hbo1410 :TFM:::::::::::::V:::::G::GAM:M:M:ARYQ::P:P:WT:::::::::::::A NP0922A :L:::DGGSWVA::::MA::::::M::::::A:AL::::::::::::::M:::::G:::T hla0665 :::::Y::::AV:::::::::::G:::V::A:G:MYL:K::::::::::V:::::::::: HVO_0084 :T::SF::::YV:::::V:::::::::::::G:AMY:::::::::::::V:::::GI:A: Hut2058 L:FN::V:::::S:::MG::IA:::::M:::::A::::D::::::::::::::::GI:A: rrnAC2619 ::::AF::::TV::::M:::VA::M:::::A::A:::::::::::::::::::::GI:A: Hmu2941 ::::DFS:::YV::::M:::IA::S:::::::I::V::S::::::::::::::::GI:A: consensus VDHVTWWGALILGLLAGAQLPIVFRFVEDRLKIDDVCAVFPVHGSAGVLGTLLIPVFAV- #oth 2244112.13311322.3211321412223131....1..2...2..22.2323122221 Hut2061 :P::::::G::::S::::LVLPT::WTV:T:::::::G::A:::M::AV::A:::L::Y: HQ3444A :P::::::G:::::I:::LVLPT::W:V:S:::::::G::V::::::AI::I:::::G:: HVO_0086 :P::::::G::::A:G::IVLPAY:WTV:S:::::::G::A:::V::AV::A:::::::: Hbo1410 :P::::::GAL::G:G:FLVLPA:::TV:T::V::::G::A:::V::AV::A:::::::: NP0922A A:VL:PM:GIM:::I:::::::::E:::K::N:::::::::::::::I::IV:Y:LWSTG hla0665 ANLA:::::ILVA:VC:L:::L::E::S:KM:::::::::::::::::I:V:AL:FVS:: HVO_0084 A:DIV:P:::VV:::::::::V::E:::K::R:::::::::::::::::::::Y:::::: Hut2058 P:TT:::::F:V:G::::::::::G:::N:::::::::::::::::::::::AF:FV::: rrnAC2619 P:TT:::::::V:::::G::::::S:M:N:M::::::::::::::::::::IMY:LV:T: Hmu2941 PNTT:::::FLV:G::::::::::N:::K::Q:::::::::::::::::::::YSFV::: consensus ----------GG--------AGFSVSQLVMQVIGVLVIAAWTVVATAVVFGALKALGQAR #oth 111114335514111111156346345235.22.141.24.125212322332314212. Hut2061 ::::::::ES::TMILGDPW:FGGIDA:G::IV::I::GI:A::GS:IA::IADL:FGL: HQ3444A :::::::TAT:::::::::Y:FLG:N::I:::V:::::GT:::F::IA:::IAN::FGL: HVO_0086 ::::::::::--::::::::S:::GT::::::V::V::::::II:S::::AIAD:VFGL: Hbo1410 ::::::::::--::::::::G:::A::FAL:IL:::I::::::T:SGI:LYV:DLTVGL: NP0922A GTPIGAGVVP:::::::::ILSIEA:MFAP:I::T:::T::::A:::::W::FRLA:::: hla0665 ::::::::::--::::::::N::::DV::S:::::V::T:::I:::::::::F::::::: HVO_0084 :::::PLWHD:A::::::::--SF::LA:P:::::G:::I::F:::::::DGFR::::V: Hut2058 :::::EAWQG:L:::::::DL::V:EGFIT::L::VI:::::IL::G::W:::::I:::: rrnAC2619 :::::::::S:T::::::::V:SIG:A:AV::V::A:::G::I:T:GLIWYG:::A:::: Hmu2941 :::::DAWAG:A:::::::NV::MIDGF:T:L:::AI:TV:::A::GLIW:::::V:::: consensus VTEEHEREGLDLSEHGVETYPEFGGGEG---------VATDGG---GVRTDGG------V #oth .2432.33...42...231....15646542222211442..111263533434423446 Hut2061 ::D:E:EV:::EG::::TV::::V:::PGTPGTSGPT:TP::::::EL:::::::::::R HQ3444A :S:KD:EQ:::E::::ISV::::VPS:RREG:::::::::::S:::::E::::VDVDSET HVO_0086 :S::E:E::::AG::::SV::::V:DA:PDGALGSP:T:::::::SD::::::VEQDET: Hbo1410 :G:TE:A:::::G::::SV::::VADGESP:::::::-MA:::::SS::::::EF::::: NP0922A :SR:::Q:::::::::TD:::::::RDA:::::::::::::::YTEA::SNSDHE::::I hla0665 ::S::::D:::V::::::::::::KAN-::::::::::::::::::SSIV:TTDTVENSP HVO_0084 :SSD:::::::TA::::D::::::SPDHDTG::::::IR:::S:::::PSGD:::::::F Hut2058 ::P:::::::::::::::::::::DEDP:::::::::LVA::::::-------:::VSA: rrnAC2619 ::P:::Q::::V::::::::::::::::::::::::::VA::::::K:N:N--::::::: Hmu2941 ::P:::Q::::V::::::::::::S:::::::::::::VA::::::-------::::TAN consensus RTDGGEDE---------------------------------------------------- #oth 534244753321111212211111222112111221111111111111111112111111 Hut2061 SLN::DN::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ3444A :S:SNSVNNDE::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0086 EAN::DSQ:::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1410 AS::::R::::::::::::::::::::::::::::::::::::::::::::::::::::: NP0922A :::::QPNDGGIKMVMAFIRPDKLSDVKQGLAEVGAPSLTVTNVSGRGSQPAKKGQWRGE hla0665 :A::::EAGSEIKMVTAVVRPDKLGAIKQALAEINAPSLTVTNVSGRGSQPAKTGQWRGE HVO_0084 M:T:R::-:::::::::::::::::::::::::::::::::::::::::::::::::::: Hut2058 :SR:DS:::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2619 :::::SKDD::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu2941 F:EVTN:D:::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 122111111112121111111221111121121112111111111112212121112212 Hut2061 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ3444A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0086 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1410 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP0922A EYSVDLHQKVKLECVVADIPAEDVAEAIAEAGKTGDPGDGKVFILPVDEAYQIRTGEVGT hla0665 EFTVDLHQKVKIEVVVADIPADEVAEAISEAAKTGEPGDGKVFILPVEDALQVRTGATGP HVO_0084 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut2058 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2619 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu2941 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus --- #oth 211 Hut2061 ::: HQ3444A ::: HVO_0086 ::: Hbo1410 ::: NP0922A DAV hla0665 GAV HVO_0084 ::: Hut2058 ::: rrnAC2619 ::: Hmu2941 :::