| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 1968 | hla1244 | HQ1462A | Hut0353 | hla0688 | NP3404A | HVO_2852 | HQ3005A | Hbo2618 | rrnAC1038 | Hmu1637 |
| 712 | hla1244 | 2199 | 515 | 538 | 627 | 555 | 608 | 631 | 557 | 561 | 583 |
| 890 | HQ1462A | 515 | 2140 | 673 | 694 | 690 | 760 | 806 | 784 | 715 | 750 |
| 1151 | Hut0353 | 538 | 673 | 2010 | 912 | 956 | 984 | 973 | 911 | 911 | 879 |
| 1431 | hla0688 | 627 | 694 | 912 | 2029 | 1123 | 1250 | 1219 | 1222 | 968 | 1098 |
| 1322 | NP3404A | 555 | 690 | 956 | 1123 | 2123 | 1069 | 1184 | 1145 | 1054 | 1020 |
| 1425 | HVO_2852 | 608 | 760 | 984 | 1250 | 1069 | 2184 | 1343 | 1411 | 979 | 973 |
| 1518 | HQ3005A | 631 | 806 | 973 | 1219 | 1184 | 1343 | 2095 | 1501 | 989 | 1029 |
| 1496 | Hbo2618 | 557 | 784 | 911 | 1222 | 1145 | 1411 | 1501 | 2068 | 1060 | 1021 |
| 1268 | rrnAC1038 | 561 | 715 | 911 | 968 | 1054 | 979 | 989 | 1060 | 1964 | 1128 |
| 1281 | Hmu1637 | 583 | 750 | 879 | 1098 | 1020 | 973 | 1029 | 1021 | 1128 | 2000 |
336 symbols consensus --------MRIEQLG----DGEPEVAVVGGIHGDEPCGARAIERLLAAD--PTVERP--- #oth 11111111132341.2111225123111121.....2.4621222435611333412111 hla1244 :::::::::ETIDR:S:::ASSAR::I:::::::::A:E:IVR::ADEL::DEEGKGSGD HQ1462A MLTTSLSY::T:I::PMDV:DA:DI::I::::::::::VQ::::FCSGALIDAIQ::::: Hut0353 ::::::::::V:::::::::::::L:I:AA::::::G:VE:::::RSNG::A:::::::: hla0688 :::::::::DVHD::::::E:::::::::A:::::::::::VR:::D::::LDL:::::: NP3404A ::::::::::V:T:::::::::::::I:::::::::::PA:V:A::D:A:::D::::::: HVO_2852 :::::::::::YE::::::::T:::S:::S::::::::::::::FV:E::::D::::::: HQ3005A :::::::::::YE::::::::V::T::::SV:::::::E::::::VSS::::::K::::: Hbo2618 :::::::::::YE::::::E:T:::::::S:::::::::S::D:FV:EE:::::D::::: rrnAC1038 :::::::::::::::::::::V:::::::S::::::::RDG::AV::DP:::A::::::: Hmu1637 ::::::::VYV::::::::::D::::::::::::::::VH:V:T::E:S:::::::S::: consensus -------VKLIVANEAALEAGVRYLDTDLNRAFPGDPDAESHERRLAAELAAEIRGC-TT #oth 111111112111...4.12324..314....2.111333242.43..5424512412133 hla1244 EEGGDGIIR::::::P::A::T::T:::::::::::T:SDEY::A::PR::::LE:MDAV HQ1462A :::::::::::I:::R::::NM::IEG::::L:::::ES:LY:E:::FD:YQ::KD:::: Hut0353 :::::::::::::::K:::::E:::E:::::::DE:VPEDA:::E::R:::::::::::V hla0688 ::::::::R:::::::::D:::::::A::::S:::::::::::A:::D::LDALD:::S: NP3404A ::::::::::V::::K::AR::::V:E::::::::::::DT::G:::H::LG::::::EI HVO_2852 :::::::::::::::E::A:DE::::D::::::::::N:::::::::HD:GR:V::T::A HQ3005A :::::::I:::::::K:::S::::::E::::::::::::DT:::Q::HN:VR:L::T::V Hbo2618 :::::::::::I:::E::AED:::I:E::::::::::N::T::::::::VVR:::::::: rrnAC1038 :::::::::F:I::::::::NQ:::::::::S::::A:S::R:T::::AI:S:L:D:::V Hmu1637 ::::::::AFVI:::::I:R:Q::V::::::S:::S::G-:R:E::::R:V:::GD:::: consensus LSLHSTQSYAEPFALVDELDAVARSICPALPVDALVETSGFAEGRLIAH-AHTIEVECGL #oth 122.113.3351.1333642474243435113242232556531133443353222.3.2 hla1244 :A::TSH:APP:::IYSD:TPST:RSVT:M:::YV:DA::LRGTT:DSTIP::VSI:V:R HQ1462A :GF:::I:FDQ::GTFAN:TPQKAT:MQ:::LEHAADF::HVT::GVNL:SEFVN::A:Y Hut0353 ::::::::S:T:::ISPG::DTT:A:V:Q:S:A:::R:GHDV::::F:TD:TI::::T:Y hla0688 :AI:::::::::::V::SM:E:::AVA:H::::VVIQ:DA:T:::::E::P::L:::A:: NP3404A :::::::::P::::::::R:GY:::V:SY:S:E:::::AQYSG:::::Y:PGVV:L:::: HVO_2852 F:I:::::::::::I::AV::IS:::L:R::::VA:::NH:::::::E:::::::::A:: HQ3005A ::::::::::::::::::I:::S:A:::Y::MEH::::GP:SD::::E:::::::::::: Hbo2618 F:::::::::K::::::SVG::::::::H::::E:::::E::G::::D:::::::::::: rrnAC1038 :::::::::DGM:::::::TPEMEDL:SV:S:::V:Q:K:AN:::M::TVDSVL:::::Y Hmu1637 :A::::R::GGM:::::TI:DL:::V::R::I::VI::D:SN:::IFDGIPA:::::::Y consensus QGSEEAAENAYWLARAFLAATGALPAPA---------------------------RRDET #oth .2155.34113544211.513213324511111111222111111111243232455575 hla1244 ::::::VAFG:EACL:::R:H::IDDEP:::::::::::::::::::::::::::-PTF: HQ1462A ::::A:V::::ACLI:Y:RVMD::::E::::::::::::::::::::::::::::--:I: Hut0353 :R:V:::::::RI:LE::T::::::GYT:::::::::::::::::::::::::::--VS: hla0688 :::DG::D::::::::::::::VV:::G:::::::::::::::::::::AEDVVDAGGRE NP3404A :R:TA::K::EA:::E::V:V:::SGGG::::::::::::::::::::::::::EQTRHH HVO_2852 :K:D:::D:::::I::::T::NV:::::VASDGGREGGAPDDAASQTEDDRLKLGIPE:N HQ3005A ::::R:IT::::IT::::S::::::::I:::::::EGDV:::::::::EPPLSLH:::DD Hbo2618 ::TPD:E::::::I::::::::VVS::I:::::::EAG::::::::::ESPLSLD::::D rrnAC1038 :::AD:::::AQVI:E::::::VTA:SP:::::::::::::::::::::::::::PQR:: Hmu1637 ::::Q::D::VV:T::::Q:V:V:::ES::::::::::::::::::::::::::::TEPR consensus DLPVFRLLEPIPKPPAEQYEVFVRNFERVAAGDAFAAAD-GERLVADEPFYPVLLSAYGY #oth 335225353521.5622612.225..14163.362.321233744125413.1.3.33.1 hla1244 EKT:VAGD:EV::GGG:P-T:HFA:::EIP::SV::ED:VYIHR:EE:GVV:I:A:EE:: HQ1462A PTTHYQVQHT:E:I:N:I:D:H:N:::Q:SP:MEY:TTGT:KS:L::SA:W:::M:SH:H Hut0353 ::S:YD:S::VE::S:AE::::AE::TY:D::ETY:::::::G:T:ADG:::I:F::::: hla0688 :VE::::RDR::::D::A::::A::::::EV:E:::::::D:Q:R:::::::::::P::: NP3404A P::I:::DKQ::::E:DT:::::E::::::E:::::::::::::::EW:::::::::::: HVO_2852 S:D::::::RL:::::D::::HAT:::P:V::ET::R:::A:QF:::RD:::I::::::: HQ3005A :VT::HM:DQ:::Q:::T:::::D::::::P::Q:::::::::YN::TE::::::::::: Hbo2618 :VN:Y:M::C:::E::DE:D:::N:::::EE::R::::::::VFT::RA::::::::::: rrnAC1038 S::::Q:G:::::AA:D::::::::::P:PE::PV:::::D:TV::E:::H::::::::: Hmu1637 :V::YE:G:::::AMG:V:::YAD:::E:G::E::::T:::DP:::::::H:::::PD:: consensus EDVFGYAADRVGTLE--------------------- #oth 3331.231463.317555443433233222221111 hla1244 :EI::IYGRVT::::PPESVRAADDSEGEVSETKTE HQ1462A DTLL::::K:T:EISATVTDSD:::::::::::::: Hut0353 :NI:::TGSF::::QTNCENAPRLVAD::::::::: hla0688 R:Q:::V::::::I:::::::::::::::::::::: NP3404A RN:::::GEL::R:GDETPTRHGAVEADGRED:::: HVO_2852 A:I::::GEK::::P::::::::::::::::::::: HQ3005A :::::::::CL:::A::::::::::::::::::::: Hbo2618 :::::::::HI:::G::::::::::::::::::::: rrnAC1038 :::::FT:::I:M:D::::::::::::::::::::: Hmu1637 ::::::T:E:T:::RSGD::::::::::::::::::