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8 genomes BUD1063 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2410

HVO_0357

HVO_0600

Hbo1123

Hmu0160

Hut1503

hla0370

NP0300A

HQ3387A

Pairwise sequence scores
Consensus score1288 HVO_0357 Hbo1123 HQ3387A hla0370 HVO_0600 NP0300A Hut1503 Hmu0160 rrnAC2410
906HVO_0357 1391 871 857 802 702 751 766 764 839
961Hbo1123 871 1373 990 852 749 825 791 785 840
939HQ3387A 857 990 1921 819 738 792 712 793 779
950hla0370 802 852 819 1487 794 842 825 857 802
954HVO_0600 702 749 738 794 1287 810 899 885 909
965NP0300A 751 825 792 842 810 1257 874 835 865
1032Hut1503 766 791 712 825 899 874 1425 938 1001
1027Hmu0160 764 785 793 857 885 835 938 1283 1007
1061rrnAC2410 839 840 779 802 909 865 1001 1007 1285

257 symbols
consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111122222222
HVO_0357        ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo1123         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
HQ3387A         MRRRETRLFSSPVTHSTDTKFIVGGALAVTSPERTPPDNHDDDATKSEGKSENEHNQNDM
hla0370         ::::::::::::::::::::::::::::::::::::::::::::::::::::VSDGRDGA
HVO_0600        ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP0300A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hut1503         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hmu0160         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC2410       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       --------------------MSDSGDEVRAYTVRLELVDEPGELLRALEPIADNGGNLLS
#oth            2323133444435344455544445351331.2....2....1..32.4..121......
HVO_0357        :::::::MSAQDLDGESDAEADG::EMPKPH:I:::::::::Q::A::K::S::::::::
Hbo1123         ::::::::::::MTEAEAVPEP:G:EQPKPH:I::::A::::Q::D::R:::E:::::::
HQ3387A         TSDGDTIPAPLDDPASENEIEP:G:NNPQPH::::::T::::Q::A::Q:::E:::::::
hla0370         PEERDDAGDGESVDGAASLDGGHASATPSTH:::::::::::Q::A::H:::::::::::
HVO_0600        ::::::::::::::::::::::EVHND:Q:::L:::::::::::::S:Q:::ER::::::
NP0300A         ::::::::::::::::::::--M:EAT::::::::::::::::::G::::::::::::::
Hut1503         :MEYDVRAQTRVFDSRGERA:::PQ:::::::::::::::::::::T:::::E:::::::
Hmu0160         ::::::::::::::::::::::::Q:::::::::::::::::::::::H:::::::::::
rrnAC2410       ::::::::::::::::::::::::T::::S::::::::::::::::::::::T:::::::

consensus       IFHERGNVTPRGHIPVEVDLEATPDRFDGIVEALRDAGVNVIQAGAERYSEELTVILVGH
#oth            .1....14....2......2.12221.26..11.23122.111..2.212.3122314.1
HVO_0357        ::::::SL:::::::::::::CP::::AR:::::::::::::R::::HFG::VM:::::D
Hbo1123         :::::::R::::R::::::::CP:::::T::D:::SE::::M:::::Q:::T::::::::
HQ3387A         :::::::L::::R::::::::CP:::::I::D:::AED:::::::::::A::VI:M:I:D
hla0370         :Y:::::K::::R::::::F::::E::E:::::::SE::::M:::T:::A::V:LL:F::
HVO_0600        ::::::::::::Y::::::I::::::::N:::G:S:::I::::::T:::::R::I:FS::
NP0300A         :::::::::::::::::::::::EAQ:ET::D:::E:::::::::::::::::::V::::
Hut1503         :Y:::::M::::::::::::::SAE:::A::::::::::::::::K:::::::::V::::
Hmu0160         :::::::M::::::::::::::::E::ED:::::QAENF:I::::::::::A::IV:S::
rrnAC2410       ::::::::::::::::::::::::E::::::D::::::I::::::::Q:::A::I::T::

consensus       LVDTDLSDTLSRIEECESASVADISLSAPEGTDEVSSARLRLATEAGRTDDALAAVRDVA
#oth            1121...1..421343542212.21.2.23.3212...121.3233.5233234221321
HVO_0357        I::S::::::H:::SSAD:TLQ:L::::R:::::A::::::::VRS::V:ETFGV:::I:
Hbo1123         :::S::::::Q:::Q:S:::L:::::N::::R::::::S:::::YS:::E:::DVI:T::
HQ3387A         ::E:::::::E:::::G:V::::VA::::::R:D::::::::::R::::A::I::::::V
hla0370         :I::::::::::::A::::::::V::A::Q::E:::::::::EAR::E:ET::::::EL:
HVO_0600        :IE:::::::TQ::ATRN:T:T:::::::A:SID:::::FQ::A:S:S:E:V:S:M::I:
NP0300A         ::E:::::::QQ:Q::GG:::::V::::AD::::E:::::::VASE:H:S:::ETIQ:::
Hut1503         :::::::::::QLR-A:NGA:T::::A::::AE:::::::::R::Q:AV::T:D:::S::
Hmu0160         ::N::::H:::H:Q:ATE:T:T:L::::::::ED:::::::::::::NA:N::::::EI:
rrnAC2410       ::N::::::::::H:STD:T:T:L:::::::::DA::::I:::::E:AV:ETMS:I:T::

consensus       AEKDLHVVEPLTEGGEA
#oth            23.4.321...142351
HVO_0357        :::E:::::::A::SQ-
Hbo1123         R::::::I:::::ASP-
HQ3387A         :D:Q::II:::::EAI-
hla0370         :::N:RL:::::-:V::
HVO_0600        D::::QL:::::V::R:
NP0300A         DK:::R::::::-:VP:
Hut1503         DQ:::R:::::AP::::
Hmu0160         :::E:T::::::A::D:
rrnAC2410       D::G:::I:::AA::::