| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 1398 | hla0246 | NP2992A | HQ3710A | rrnAC2702 | HVO_0053 | Hbo1440 | Hmu3062 | Hut2189 |
| 730 | hla0246 | 1547 | 606 | 558 | 540 | 578 | 660 | 564 | 505 |
| 857 | NP2992A | 606 | 1431 | 655 | 698 | 677 | 632 | 631 | 618 |
| 856 | HQ3710A | 558 | 655 | 1998 | 638 | 797 | 842 | 649 | 571 |
| 936 | rrnAC2702 | 540 | 698 | 638 | 1486 | 708 | 650 | 793 | 814 |
| 999 | HVO_0053 | 578 | 677 | 797 | 708 | 1477 | 922 | 793 | 614 |
| 960 | Hbo1440 | 660 | 632 | 842 | 650 | 922 | 1509 | 670 | 604 |
| 927 | Hmu3062 | 564 | 631 | 649 | 793 | 793 | 670 | 1398 | 796 |
| 864 | Hut2189 | 505 | 618 | 571 | 814 | 614 | 604 | 796 | 1603 |
297 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 hla0246 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP2992A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ3710A MIPNPDERIGSNTDADTDGRAESESGTESSAEADQVESVFTVLNGVSVSIEDNKYVTLVL rrnAC2702 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0053 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1440 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu3062 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut2189 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus -----------MADEVKRRLVHASGAALPLLYLL-------GLITWRVVQYLLVVAAAVV #oth 11234345543365.25.....221233.4411221111134343.44334232423133 hla0246 ::VPLPAAEWRAEV:FE:::::SG:TLY:VP:::::::::::WF::TETR:F::A:L::: NP2992A ::::::::::::PF:IR::::::::::V:GV:::DNHAIGA:::::Q:::L:A::GLVAT HQ3710A NHSDNSNSRSVSGN:I:::::::::TV:::::VI:::::::NILS:S:FEIIMIIG::TA rrnAC2702 ::::::::::::::::S:::::VT:::V::AH::R:::::PD::::::::GF:T::LV:: HVO_0053 :::::::VGRPSTA:::::::::::SGM:::::::::::::::VE::TLG::F:FL:::: Hbo1440 ::::VSPRISVSKS:::::::::::::::FG:V::::::::DIVS:AQLR::M:FLTV:: Hmu3062 :::::::::::::::IA::::::::TG::A:H:::::::::E:TD::T:::::::G:::G Hut2189 :::VFASFLDRID:::T:::::::TSV:::A:VF::::::VAEL:::H::A:::L:MVGA consensus AVLEFLRLFVGLDWAIYDRLTREYEQDNLAGYALYIVSATAVALV-------------FE #oth 34..53..43.11132113.1.1..1223.1.1.1531514.323222211111111125 hla0246 LT::::::V::F:H:L:QK:I::::T:SI::::::Q::M:G:V:L:::::::::::::LN NP2992A ::::VA::YG::EH::::Q:::::::ETV::::::VLG::I:VF:::::::::::::::: HQ3710A :L::TV:::I::E:R:::E:::S:::T:I::::::AF:S:T:II:::::::::::::::T rrnAC2702 C:::AV::TT::::VV::::::::::::P::::::::GIAI::FAVELPG::::::::MT HVO_0053 S:::L::::G::E::V::E:::::::::V::::::VY:Q::::::::::::::::::::G Hbo1440 ::::::::R:::::::::E:::S:::T:::::::::F:M:::V::::::::::::::::: Hmu3062 LA::VI::V::::::::::::::::::::::::::L:::A::G:-:::::::::::::LA Hut2189 LG::IV::Y:::::W:F:::::::::E:::A:F:GG:GL:V::FAFPPAGADPLIGSP:D consensus P-TVAVPAMLMLTLGDPISGLLG-SREAGEVKRPRVLAAMFGVCFALAAPFVPPAAATL- #oth 1242.1.123..221..2..2112444344613342222..412242244.262331352 hla0246 :::L:I:::W::S::::V::A:::DND:T:A:::AAWI:::L:SLS::LL:TV::FG:GV NP2992A ::::::::LF::::A::V::M:S:GN:FRR:A::::F:G::L:S::::Y:::SA:::VA: HQ3710A ::VI:::::M:::::::::::::TT:A:::S::::T:IV::T:::VIGLV:LF:I:G:T: rrnAC2702 E::I::::::::AV:::::::::::SD:SNI:QAW::LV:::::TL:::::::::::I:: HVO_0053 ::HI:::G:::::I:::::::M:::APV::L:SA:T:::::A::::::::::I:VSGGVA Hbo1440 ::Y::::G::::A::::V:::::RT:::::P::LGT:::::I::L:VSV::LL:V:G:I: Hmu3062 :EH::I::I::::I::::::::S::GSLT--:ETY::L::::::TGI:SF::HWVP:V:: Hut2189 :SP::::::::::I:::F::::::AG:LQA::QTW::L::::LTTLI:SA::::LP:I:: consensus GGLAA------ATIADGAKPVIRGYVIDDNLSIPPAAALAMAAALEA----PALGL- #oth .3331422232.14...41.213.212...21.124214225344531114444312 hla0246 :IAV:LAGAVL:A::::LP:I:::VAV::::T::::::GG:LL:VTV::::LGV:V: NP2992A :AVG-:::::::A::::V:::VG:::V::::T::VVS:AL:W::RT:::::--::V: HQ3710A :VIS:GVAAIG::V:::I:::VG:::::::F:::LI::TGSSII:FVGGHQ:IIS:Y rrnAC2702 ::V:-::::::::F:::V::R:A:::::::F:::VLG::::WVGVQY:::L:GI::: HVO_0053 :::::AAGAAG::L:::::::VA::::::::::::V:CT:I::T:WL::::----:T Hbo1440 :VI::VAGSVG::::::M::::::S:::::A::::::C::I::V:A::::TG:AAVT Hmu3062 ::::-::::::::A:::L::::W:::L::::T::::::V::V:GM:L:::MAT:S:: Hut2189 ::::-::::::::V::::::::::::V::::T:A:S::V::FV:I:Y:::L::::V: