| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3756 | hla2708 | HQ1292A | HVO_0644 | Hbo0884 | Hut0085 | NP0624A | rrnAC1690 | Hmu0619 |
| 2858 | hla2708 | 4141 | 2642 | 2658 | 2649 | 2524 | 2701 | 2469 | 2524 |
| 3052 | HQ1292A | 2642 | 3900 | 2854 | 3115 | 2704 | 2755 | 2590 | 2664 |
| 3041 | HVO_0644 | 2658 | 2854 | 3784 | 3167 | 2611 | 2751 | 2598 | 2672 |
| 3144 | Hbo0884 | 2649 | 3115 | 3167 | 3866 | 2744 | 2821 | 2617 | 2713 |
| 3113 | Hut0085 | 2524 | 2704 | 2611 | 2744 | 3743 | 2841 | 2814 | 2885 |
| 3239 | NP0624A | 2701 | 2755 | 2751 | 2821 | 2841 | 3762 | 2915 | 2946 |
| 3105 | rrnAC1690 | 2469 | 2590 | 2598 | 2617 | 2814 | 2915 | 3700 | 3027 |
| 3177 | Hmu0619 | 2524 | 2664 | 2672 | 2713 | 2885 | 2946 | 3027 | 3767 |
571 symbols consensus ----------------------LFGGHPA---TRA---------------LDDDDEVQLL #oth 11111111111111111113443215416323355111111111111111.42525.11. hla2708 VIVRRIEEVASRRLAAKFSDDNDS:AR:PRGG:DPEPTVEPTDSLLTRTQ:TTL:::::: HQ1292A :::::::::::::::::::MVD::::N:GIPLAS::::::::::::::::::S:GT:::: HVO_0644 :::::::::::::::::::VNER::KT:E:::---::::::::::::::::RTS:S:::: Hbo0884 :::::::::::::::::::VVD::::N:TTPNASV:::::::::::::::::S::T:::: Hut0085 :::::::::::::::::::::::::E:::::::QS::::::::::::::::ESLSD:G:: NP0624A :::::::::::::::::::MTT:::D:::::::AP::::::::::::::::E:Q:-::F: rrnAC1690 ::::::::::::::::::::::-------:::M::::::::::::::::::S:VG:::F: Hmu0619 ::::::::::::::::::::::::::::L:::::D::::::::::::::::S:A:G::F: consensus DTTLRDGEQAPGISLTPDEKADIARELDAAGIDVIEAGSACTGPGERETIRRVADLDLDA #oth .........1..1..2.32.13...3..113243......1.12...11.31.1311..1 hla2708 :::::::::M::V::::A::V::::::::::MHL::::::::SE::::A::::::EG::: HQ1292A :::::::::::::::D:::::E::::::RS::EF:::::::::E:::::::Q:TG::::: HVO_0644 ::::::::::::V::::TQ::::::A::R:EV:Y::::::::::::::::K::TS:G::: Hbo0884 :::::::::::::::S:E:::::::A::R:NVQY:::::::::Q:::::::::T::G::: Hut0085 ::::::::::::V::S:A:::H::::::::::::::::::V::::::::::::TE::::: NP0624A :::::::::::::::::E::::::::::::NVS:::::::::::::::::A:::::G::: rrnAC1690 ::::::::::::V:::::D::::::S::::R:::::::::::::::::::S:::G::::S Hmu0619 :::::::::::::::S:::::R:::Q::::E::::::::::::::::K::S::::::::: consensus TVTSFARGVKNDIDLALDCGVDGVNLVVPASDRHVEQKVGTTREDVVETTVELVEYAKDH #oth 11...1.1134.111.1111...121......2.1.4.12212221134.31..1..211 hla2708 ::::::::::A:::H::::::::I::::::::K:::T:::S::D:::::::::::::T:: HQ1292A ::::::::::S::E::V:::::::TI::::::Q:I:T:::S::SE::T::A::::::::: HVO_0644 ::::::::::::V::::::D::::T:::::::::::S:::::::::::::D:::A::::: Hbo0884 :I:::::::QR:V::::::D::::TI::::::K:::G:::::::E:::::GD::A::::: Hut0085 :I:::::N:EG:V::::ET:::::H:::::::::I:G:LSA:::::IAD:AD::A::T:: NP0624A R:::::::::::::::V::::::::::::::::::::::D::HDA:::K::::::::T:: rrnAC1690 :::::C::IQ:::::::::::::I::::::::K::::::::SKSEN:DN::::::::V:: Hmu0619 :::::C::IR:::::::E:::::I::::::::::::D::::S:::N:AS:::::::::AQ consensus GLWVEVIGEDGSRADLDFLEELLGAALDAGADRICYADTVGHATPDRTLEAVSRLADLGP #oth 1.....1.......1211.131221231.....3.32....113.132224111.131.. hla2708 ::::::L::::::::::Y::R::::G::::::::::C::::A:D:E::AAV::::::R:: HQ1292A D::::::::::::::IE:::R:MRE::::::::S:::::::::N:ET:Y:Y:::::A::: HVO_0644 ::::::::::::::APE:::S:AR:SH::::::F:F::::::TS:EH:Y:V::::SE::: Hbo0884 ::::::::::::::::E::VDIAE:::::::::S:::::::::S:ET:Y:Y::A::E::: Hut0085 D:::::::::::::::::::::M:E::::::::V:::::::::::::::D:::::::::: NP0624A ::::::L:::::::::::::::M:::I::::::::AP::::::::::M:DIYA::SE::: rrnAC1690 :::::::::::::::::Y::::::::VE:::::::W:::::::::::A::C::::S:::: Hmu0619 :::::::::::::::::Y::::::::I::::::::W::::::::::GA:::::::SK::: consensus TSTHTHDDLGLAVTNALVSLAAGADLVHGTINGIGERAGNVALEEVAIALDHGYDVETMD #oth 1.2.......1112.131221....3..1.11.1........1.......212.111134 hla2708 ::L:::::::FG:A:VHAG:K::::T::::VM:V:::::::::::::::::QS::ID:VE HQ1292A V:::::::::::M::VW:::::::::::::V:::::::::::::::::::A::::I::AT HVO_0644 ::::::::::::MA:VHA::::::::::T:V:::::::::::::::::::::C::::SVK Hbo0884 V:::::::::::M::VYA:::::::V::::V:::::::::::::::::::S:C:::::AK Hut0085 ::::::::::::::::::::::::::::::::::::::::::::::::::::::G::::: NP0624A ::::::::::::::::::GV::::::::::::::::::::::I:::::::::::G:::LE rrnAC1690 V::::::::::::::::::I::::::::::::::::::::::::::::::::::G::S:A Hmu0619 V:A::::::::::M::::AV:::::M::::::::::::::::::::::::::::G::::: consensus LDELYDLAQLVANATGIPLAPNKAVVGENAFTHESGIHTDGTLKDDAMYEPYPPEKVGRE #oth 122113.2121143.113.1.....2.2...1.............32.....2.12.... hla2708 :ER::R:CRT:SE:::VA:P:::::C:A:::A:::::::::::::GT::::::::T:::: HQ1292A ::Q::S:::T:SQ::N:::P:::::I:::::::::::::::::::KT:::::S:SS:::: HVO_0644 :::::A:::K::Q:::VS:P:::::::Q:::::::::::::::::::::::::::T:::: Hbo0884 :::::A:::K::H:::V::P:::::::::::::::::::::::::::::::::::T:::: Hut0085 :TQVH:::::I::K:::::::::::::::::::::::::::::::ES::::::::::::: NP0624A TER::::G:::STK::V::::::::::::::::::::::::::::::::::::::::::: rrnAC1690 :T:V::::::I::R::::::::::::::::::::::::::::::::S::::::::::::: Hmu0619 :T:V:::::::::T:::Q:::::::::Q::::::::::::::::::::::::R::::::: consensus RRLVLGKHAGRAGVEAALDEHDVDVTDDELAAVVERVKELGDRGKRVTDADLLAIAEDVQ #oth ...1..........3...1..21212211132113...32.1.11........11111.2 hla2708 ::::::::::::::K:::A::::A:DN:::SE::G::::::::::::::::::::T:::: HQ1292A ::::::::::::::Q::::::RI::SE::VT:I:D::::::::D:::::::::T:::E:: HVO_0644 ::::::::::::::K::::::G::A::E:V::::::::::::::::::::::::F::::: Hbo0884 ::::::::::::::A:::::::::::::::::::::::AV:::::::::::::::::::: Hut0085 :::A::::::::::::::A:::::::::::D::F::::D::E:D:::::::::::::::: NP0624A ::::::::::::::::::A:::IE::::::SE::D:::R::::::::::::::T:::E:: rrnAC1690 :::A:::::::::::::::::::E::::Q:SEI:S::::I:::::::::::::T::DE:T Hmu0619 :::A::::::::::A:::::::I::S:::::TI:G::::I::::R::::::::T:::E:K consensus GRERDRRVELLDLTAASGGGTPTASVRLRVDGEERV-ASGTGSGPVDAAMNAVRAAL--- #oth 12212.21..11.2131.121....1..41323..311121.1.....134.213..111 hla2708 ::::::H:::V::S:T:::NL::::::::IGDN:::::::::::::::GLE::::::AGD HQ1292A ::::::H::::::::::::::::::I::::GEN::::::::::::::::VE::::::::: HVO_0644 ::::A:Q:::::::::::::::::::::::E::::::::::::::::::VK:::E::::: Hbo0884 ::::::::::::::::::::::::::::::ND:::::::::::::::::VK:::S::::: Hut0085 D:::E::I:::::NTVA:S::::::I::L::DV::T:EASV:D::::::::::E:::::: NP0624A :::H::::::V:::::::S:::::::::E:::T::::::::::::::::IA:::S::::: rrnAC1690 DDA:A::::::G:::V::SD::::::::S::::::K:EAAV:::::::::::AEV::::: Hmu0619 :TD:E:::::::::TIA::::::::I::A::::::EP::A::::::::::T:IEE::::: consensus --GHDADAQLDSYHVDAITGGTDAVVTVEVEMSRGDRSVTVAASDSDITRASVEAMVDAL #oth 111441224.12........2...1....121.21.12.2.13111...11..4...112 hla2708 SA:EGVSFE:::::::::::::::::::::DL:::::::S:S:T:A:::::::V::::G: HQ1292A :::T:::::::::::::::::::::::::::::::::T:S::T:::::::C::::::E:: HVO_0644 :::P:::::::E::::::::::::::::::T::L:::::S::::HA:::::::Q:::::: Hbo0884 :::P:::::::::::::::::::::::::::::H::::::::T::::::::::::::E:: Hut0085 :::::V:WS:::::::::::Q:::::::::::::::::::::R::A:::::::::::E:I NP0624A :::SA:::::E:::::::::::::::::::::::N::T:::::::::::T:::R:::::: rrnAC1690 ::S:T:::T:ED::::::::::::L::::I::::::DH:V:S:::::::::::R:::::M Hmu0619 :::SSVNWN:::::::::::N::::::::::::::::T:::SN::::::::::H:::::I consensus DRLL--------ADEEEPVV--------ADD #oth ...1222223345243414411111211... hla2708 ::::::::SAAAK:GSV:D::::::ASL::: HQ1292A ::::SVDTSGTSSNS:SD:DVDADDVSL::: HVO_0644 :::::::::APNHTSPT:AS::::::::::: Hbo0884 ::::VAVDGTPDDTA:S:PR::::::::::: Hut0085 :::V::::::::ET:SG:L:::::::::::: NP0624A :::::::::::::::S:::L::::::::::: rrnAC1690 :::V::::::::::D:::L:::::::::::: Hmu0619 :::::::::::::::D:::::::::::::::