|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 1881 | rrnAC0206 | Hmu0691 | HQ1508A | NP1492A | Hut1675 | hla2633 | HVO_1100 | Hbo0605 |
1212 | rrnAC0206 | 1849 | 1270 | 834 | 965 | 1028 | 957 | 977 | 942 |
1220 | Hmu0691 | 1270 | 1875 | 878 | 938 | 966 | 925 | 937 | 963 |
1166 | HQ1508A | 834 | 878 | 2269 | 875 | 808 | 1031 | 1010 | 1058 |
1168 | NP1492A | 965 | 938 | 875 | 1824 | 981 | 952 | 975 | 973 |
1261 | Hut1675 | 1028 | 966 | 808 | 981 | 1794 | 1099 | 988 | 989 |
1435 | hla2633 | 957 | 925 | 1031 | 952 | 1099 | 1944 | 1289 | 1188 |
1425 | HVO_1100 | 977 | 937 | 1010 | 975 | 988 | 1289 | 1873 | 1283 |
1422 | Hbo0605 | 942 | 963 | 1058 | 973 | 989 | 1188 | 1283 | 1904 |
307 symbols consensus ------------------------MVRVAVTGATGRMGREVIEAAADRDDVEVVFAVSRT #oth 1111111111111111111123345433324124122.4223341632343423314441 rrnAC0206 :::::::::::::::::::::::::T::::N:V::Q::GA:::::T:SE-:V:G::T:D: Hmu0691 :::::::::::::::::::::::::T:I::C:::::S:AA:V::GRA:::::::AGFAS: HQ1508A MSNTETNSHKDSTNTTVSNSSTQPG::L:I:::S::::T:LRSM:NEKTAI:F:L:ITQ: NP1492A ::::::::::::::::::::::::-MN:V:V:::::T:S:IVAE:SE:GHDVSGV:R:Q: Hut1675 ::::::::::::::::::::::::------------:::T:::T:G::E::T:::::DA: hla2633 ::::::::::::::::::::MSGDSLSI:::::G::::::::S:::::EG:A:SV::N:: HVO_1100 :::::::::::::::::::::::VT:S:G:::::::::G::LA:::::::LS:A:::::S Hbo0605 :::::::::::::::::::::MAAP::::I:::A::::::L:DV:DS:::::::L::N:S consensus P--------------DAVAGVPVEDADD-LAELLAEHDPDAVVDFTGPEATVEYAEAC-- #oth 351111111111111252522324333313443.34423.131..22.323433242211 rrnAC0206 -:::::::::::::::::DD:::VHPAE:A:AA:R:Y:V:V::::AV:KGALTV:::::: Hmu0691 A:::::::::::::::ETDDL:LRP:SE:AGTV:E:Y:V::::::ST::::MDVLAG::: HQ1508A :DSVPAPKPDSVDAP::IIP:SG:PSETG:EGS:ET:NI:VL::::T:D:SI::LD:VDT NP1492A -::::::::::::::-S:GD:R:YPTEE:FP:::--DNA:::I:::V::::R:HVQ:A:: Hut1675 DE:::::::::::::ET:::T::HEP:::IGA:::T:E:::I:::SV:K:::AF:::::: hla2633 :T::::::::::::::P::::A:::::R::D::::AAE:::L:::::::SA:A:::I::: HVO_1100 :G::::::::::::::V:E::A::::A::F:D:::S:E::V:::::::ASCI:::S:::: Hbo0605 :I:::::::::::::E::S::::R::::::P:::::T:::VM:::::::SS:::VA:::: consensus AAAGVALVVGTTGFDDDQLAALREAAEEVPVLKASNFSRGIAALRRAVREAVAALPGYDI #oth 2321.25221...231215331451124312.2.2..11.111.2131312141.24..2 rrnAC0206 VE:::PM::::::::E:G::R:QD:S::I:L:::T:::Q::QV:Q:LIS:::GT:DD::L Hmu0691 LDN::::A:A:::::EA:SER:::::::I:::::T::::::Q::L:T::A::G::ED::L HQ1508A :NVD::AI:::::Y::A:RSMISSF::TT:I:::::::::::::::::S:V:ST::S::: NP1492A :::::PY:I::::::::GM::::T:S:STA:::::::A::VQ::L:V:EAG:E:::E::: Hut1675 :::::P::T:::::E::::D::EG:S:D:A::::A::A:::Q::LST:HA:AE::::::V hla2633 :D::::M:T:::::A:A::DG::A:SKA:::::::::A::V::::::::::A:::::::V HVO_1100 ::::::F:T::::LSEGGFD::::::S:A:::Y:::::::::::::::::::P::D:::: Hbo0605 :E:::GV::::::::E:GH:::D::::S::L:H:T:::::V:::::::::::::::N::V consensus ELTETHHNGKRDAPSGTANTILDDIDEVRD--E-SERVHGREGDAPREDDEIGVHARRAG #oth .11.1...2.2.......411.24232412112342311..1.321.543.1..11.... rrnAC0206 ::M:::::R:V:::::::SS:::V:Q:E::::-:V:P:Y::::H::::::::::F::::: Hmu0691 ::M:S:::::V:::::::::::ETVQ:Q::::-:V:P:Y::::H:::A::::::F::::: HQ1508A :V::::::::::::::::V::::::ESAQNNS:S:TH::::V:::::HES:::::::::: NP1492A :::::::::::::::::::::::VV::T:::::ALD:T:::::EHR:G:::V:::V:::: Hut1675 ::::::::::Q:::::::::L::ALA:E::::-:F:ETY::::MQ:::AG:V:::V:::: hla2633 ::::::::A:::::::::KS::::VES:::::DLD:::::::::::::SN:::::::::: HVO_1100 ::::::::A:::::::::L:L:::::D::G::D::::::::::::::SEG:V:::::::: Hbo0605 :V::::::::::::::::::L:TE::D::G::::::::Y:::::Q::MGG:::::::::: consensus DVRGEHELLLAGNDEVLSLTHRAEDRGVFAAGALDAAVWLADRDPGWYDFGDVLDA---- #oth 212.1..122.1221312.1...11.11..1..2...5.111.22.3.3.3212232222 rrnAC0206 ::::::::V::::::::::S:::::::::::::::::T::VG::S:::E::::V:::::: Hmu0691 :I::::::V::::::::::S:::::::::::::::::Q::VG:::::::::A:V:DA::: HQ1508A :IA:K::V:M::G::::E:::::GS::I:::::::::::I:G:S::E:::DA::::GTDT NP1492A T:::::::::::::::::::::::S:R::::::V:::E:::::SA:::::E:TV--:::: Hut1675 ::::::::MF::::::VT:::::::::::::::I:::::I:G::::F:T::::IEG:::: hla2633 ::T::::V:F:::R:AVE:::::G::::::E::::::D:::::E::::A:::::::GGAG HVO_1100 :IA::::V:::::H:S:::::::GS::::::::::::A::::::A:::::TE::E-:::: Hbo0605 G:T::::V:::DDHQL:::::::GS:::::::::::::::::::A:R:::DE:::::::: consensus ------- #oth 2111111 rrnAC0206 ::::::: Hmu0691 ::::::: HQ1508A TEYNEDS NP1492A ::::::: Hut1675 ::::::: hla2633 E:::::: HVO_1100 ::::::: Hbo0605 :::::::