8 genomes BUD1079 8 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1291 HVO_1127 Hbo0433 Hmu1688 Hut0736 hla0271 NP4438A HQ1655A

Pairwise sequence scores
Consensus score	1149	HQ1655A	hla0271	Hut0736	Hbo0433	HVO_1127	NP4438A	rrnAC1291	Hmu1688
490	HQ1655A	1277	423	340	471	404	377	378	371
756	hla0271	423	1286	525	527	566	510	517	558
653	Hut0736	340	525	1187	486	492	558	622	540
733	Hbo0433	471	527	486	1206	703	467	544	481
660	HVO_1127	404	566	492	703	1164	530	560	452
734	NP4438A	377	510	558	467	530	1164	607	614
810	rrnAC1291	378	517	622	544	560	607	1135	687
774	Hmu1688	371	558	540	481	452	614	687	1134

191 symbols
consensus       ---------MSLAAATRDAVRARPFLLDALRAGVVNYTAAARWLD----VEGDTEAVATA
#oth            122212123111..31.2.1.11.31431...112.13...36.2111122.14111.2.
HQ1655A         ::::::::::::::E::A:A::H:W:VT::::DII::R:::SF::::::L:::IDS::R:
hla0271         MPPRAADPA:::::E::E:A:::::V::::::::L:HS:::A::ADEAGLD::PD:I:::
Hut0736         MVVSAGDER:T:::RA:E:A::H::VHEG:::::I::S::::L:::::::-::E::::A:
Hbo0433         ::::::::::::::::::::::::S::Y:::::::::::::ES:::::::::::DSI:::
HVO_1127        ::::::::::::::DA:::::E::Y::T:::::::::A:::AE::::::L-::D::::A:
NP4438A         ::::::::::TV::D::A:::E::::ET::::::::::::::V:::::::-:::::::A:
rrnAC1291       :::::::::::::::::::::E::::Y:::::::::::::::T::::::I::EE::I:::
Hmu1688         ::::::::MA::::R::E::::::::Y:::::::::::::::::S:::::::::::::::

consensus       LRRFAEELPEDA-IPDRDARVSMRSGVGRVDDD--------DAD---LLRVGDTAFAADG
#oth            ...1223135541554333413.21.2142345331111133344331241233442453
HQ1655A         ::::GDS:NKFTTVGES:IPIR:HH::DI:S:THDMVQKQGE:SVDI:::LNSEFIITAD
hla0271         ::::R:::SDY::TA::A:S::::::::V::G:SL:::::E:::::P:::::GA:VVPE:
Hut0736         :::Y:A::::RD::::GSP::T:H::L:A:EHG:::::::::GG:::::T::E:TY:ENA
Hbo0433         :::::DD::PVE::EH:EVT:R::::::LAGE:VD:::::A:::DDRV:T:::VD:V:S:
HVO_1127        :::::AD::PLE:ADP:::A:T::::::L:GE:VE::::::VT:GEPV:S:AGVDL:-G:
NP4438A         :::Y::AAD:YS:P:KT::S::::::I::S::N::::::::SNG::::FS::::C:::::
rrnAC1291       :::::::::A:S:PH:S::::::Q::L:::ESS::::::::::ESAIV:E:A:::::E:A
Hmu1688         :::Y::::DG:::G:ES::::A::::L::A::E::::::::::-::::IA:A:A:Y:P:S

consensus       GSLTAIIATG--DVDPRALAAVLGRLRAADIAVDAAGVADDTLVVVVGRRDGADALRAVE
#oth            1411123141114444641551251132131512..1333342311.31.3.1411.61.
HQ1655A         :Q:S:::VDTVP:MTISGFTTAIE:VQME::NIK:::TLQ:MFI:I:P::K::S:::S::
hla0271         RD-:::L:::::T::AA::::::R::A:::V::E:::::GE::::::::::::I:V:IA:
Hut0736         ::::GVA:::::TI:A:S:VR::A::D:E:V::E::A:::GY::L::D::::P:VV:F::
Hbo0433         :G:::LVV::::E::T:::SV:CD::D:EN:L:::::::::E:::::PQ:Q::T:::H::
HVO_1127        :P::::::E:::E:::TV:::::S::D:ESVV:::::::G:::A:::P::Q::A:::V::
NP4438A         :D::::V:E:::::E:GV:EP::::::T:::G:E::AAG:GY:A:::::::::::V::::
rrnAC1291       ::::G:::S:::ALA:E::GE:::::::::VS::::::T:AA:::::S::A:P:V::T::
Hmu1688         ::::G:VVA:::LTGVDTFER:::A::::G:G:::::F:AE:AL::::::::P::V::::

consensus       AALEV-P----
#oth            23366434211
HQ1655A         :::T:I:TS::
hla0271         :S:A:V:SQED
Hut0736         :MI--:-::::
Hbo0433         SVF:SL:V:::
HVO_1127        ::VSDLYV:::
NP4438A         GS:GQATH:::
rrnAC1291       ::VQK:-::::
Hmu1688         ::::A:-::::