| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 4548 | hla2446 | HVO_1508 | Hbo0045 | HQ2702A | NP2202A | Hut1328 | rrnAC0330 | Hmu1209 |
| 3717 | hla2446 | 4706 | 3343 | 3494 | 3433 | 3089 | 3149 | 3271 | 3257 |
| 3613 | HVO_1508 | 3343 | 4529 | 3653 | 3517 | 3025 | 2937 | 3174 | 3139 |
| 3786 | Hbo0045 | 3494 | 3653 | 4498 | 3689 | 3134 | 3142 | 3294 | 3294 |
| 3726 | HQ2702A | 3433 | 3517 | 3689 | 4618 | 3131 | 3052 | 3131 | 3164 |
| 3539 | NP2202A | 3089 | 3025 | 3134 | 3131 | 4497 | 3226 | 3408 | 3404 |
| 3628 | Hut1328 | 3149 | 2937 | 3142 | 3052 | 3226 | 4534 | 3445 | 3433 |
| 3748 | rrnAC0330 | 3271 | 3174 | 3294 | 3131 | 3408 | 3445 | 4542 | 3937 |
| 3787 | Hmu1209 | 3257 | 3139 | 3294 | 3164 | 3404 | 3433 | 3937 | 4545 |
617 symbols consensus MSERAS-----PDPDEDDAAD-------DEADQA--------------PVTTGADAVVRA #oth ..34252211154143332431111113224564412211222222222121.141112. hla2446 ::DT:-:::::AQ:R::::EEPKDPPDA::SVA:ETDDPSDTDGPVTG::S:::ES::A: HVO_1508 ::::TAAT:::T:::AT::::::::::::A:QTPT:::::::::::::E::S:ST::::: Hbo0045 :::P:P::::::K::T:E---::::::::GPTGQT:::::::::::::::::::S::::: HQ2702A ::KQ:::::::TN::IETE::::::::T:ADA:PQTQTPSPETTSDVL:IE::::::I:: NP2202A ::GEQT:::::HK:QAETETA:::::::AG::--::::::::::::::DIE::::::::: Hut1328 :::::FHQDRE:::ST:A:D:::::::E::::D:R:::::::::::::E:::::E:AII: rrnAC0330 :::::-:::::SV:K:EEETE:::::::P:TE:E::::::::::::::::::::QS:I:: Hmu1209 :::::::::::VQA::A::DE:::::::::PEP:::::::::::::::::::::QS:::: consensus LENAGVEAAFGVQGGAIMPVYDALYDSDIRHVTMAHEQGAAHAADAYGVVSGEPGVCLAT #oth ..2113142..........1.....2.213.1........1.....1.1.411..112.. hla2446 ::A::A:T:::::::::::::::::::S::::::::::::::::::::::A::::L:::: HVO_1508 :::::::T:::::::::::I:::::H::::::::::::::::::::::::R:D::::::: Hbo0045 :::::::::::::::::::::::::::::::I::::::::::::::F:::RN:::::::: HQ2702A :::E:I:::::::::::::::::::Y::::::::::::::::::::F:::KN:::::M:: NP2202A :::::::HL::::::::::::::::H:EM::I::::::::::::::::I::::::::M:: Hut1328 ::E:::DM:::::::::::::::::::::E:I::::::::::::::::I:::::::AM:: rrnAC0330 ::::ETDYV::::::::::::::::::::N::::::::::S:::::::::T:D::::F:: Hmu1209 :::::A:YV::::::::::::::::::E:D::::::::::S:::::F:I::::::::F:: consensus SGPGATNLVTGIADANMDSDPMLALTGQVPTDFVGNDAFQETDTVGVTQPITKHNYFADD #oth ...........1...2....221......1121..1.....1..2.1.4.2..311..42 hla2446 :::::::::::::::D::::A::::::::::E::::::::::::::::R:::::::::NG HVO_1508 ::::::::::::::::::::AV::::::::S:M::S::::::::T:::A:::::::::SS Hbo0045 ::::::::::::::::::::GI::::::::SNM::S::::::::I:::T:::::::::A: HQ2702A ::::::::::::::::::::G:::::::::S:M::S::::::::I:::A:L::::::::: NP2202A ::::::::::::::::::::::::::::::::::::::::::::I:::G::::A:V:::: Hut1328 :::::::::::::::S::::::I::::::A:::::::::::V::::I::::::N::::G: rrnAC0330 :::::::::::::::::::::VI::::::::E::::::::::::::I::::::ES:::A: Hmu1209 :::::::::::L:::::::::VI::::::::E::::::::::::::I:::V:::S::::: consensus PDTVGDTVGEAFALADEGRQGPTLVDLPKDVTKGETDVEPGPPEPPDTYRPPEEADDEAV #oth 2122.22.11.21.143..1.........1213211233132233.31242334114331 hla2446 A:::::::::::E:SRA::P::::::::::::QA::EET:::AA::AGTD:DPN::AD:: HVO_1508 :::::::::::::::A:::P:::::::::::SLN:::T:S::AQ::E:C:ARTDPA:SQ: Hbo0045 S:S::::::::L:::::::P::::::::::::L::::R::::A:T:K:TT:QT:P:EA:: HQ2702A :::I:::::::L:::::::P:::::::::NI:SAD:ER::T:G:::A:T::QYS::KD:: NP2202A SEA::TD::T:::::NR:::::::::::::::::DATED::A::L::::E:::T::P::: Hut1328 :::L:AD:S::::::ES:::::::::::::AS:A::::Q:VS::T::::H:::T::EAVI rrnAC0330 S:::::D:S:::::::A:::::::::::::::Q:::E::::S::T:E::EV:::::::N: Hmu1209 A::::TE::::W:::N::::::::::::::I:::::::::AA:KR::::DV:::::::N: consensus EEAARAIEAAERPLILFGGGVIKADASEEARAFAREYEIPVVTTMPGIGSFPEDDDLCLS #oth 441.32114.22.13.3....1.11.2221.4..5213...2.....1.21..111.1.2 hla2446 :D:::::::::::VC::::::::::::DA::T:::S:G:::T:::::::::::::::::: HVO_1508 :A::::::R::K::L::::::V::::T:V::Q::T:HR:::::::::::AM:::HE:::: Hbo0045 AN::::::M:::::L:L:::::::::T:::::::H::G:::::::::::::::::::::: HQ2702A LTT:S:::E:SQ::L:::::::::::T:::::::::H::::::::::::::::::::::: NP2202A S:::DVLA::DK::::A:::::::E::::L:E::I:H::::::::::::C::::HE:S:E Hut1328 :A::ET::D:D::V::S::::::GE::D:L:::::K:D:::I:::::L:::::T:::S:G rrnAC0330 Q:::E:LAE:D::V::S::::::::::SAL:E::K::::::I::::::::::::HE:S:E Hmu1209 Q:::D:LA:::::VV:A:::::::::ADAL:D::F:::::::::::::::::::HE:S:E consensus WAGMHGTGYANMAITHTDCLIAVGTRFDDRLTGGIDTFAPDAEVIHIDIDPAEISKNVHA #oth 11......1..1..12..21111.........1.211...1.111.11..1..11..12. hla2446 :G::::::::::::::::::::::::::::::::::::::E:::V:::::::::::::Y: HVO_1508 ::::::::::::::::::::::::::::::::::::::::E:::V::::::::::::::: Hbo0045 ::::::::::::::::::L:::::::::::::::::::::E::::::::::::::::I:: HQ2702A ::::::::::::::::::L::G::::::::::S:::::::E::IV::::::::::::::: NP2202A M::::::::::::::M:::ML:::::::::::::LES:::::::::VE:::::V::::E: Hut1328 M:::::::A::L:::N::V::G::::::::::::V:::::::::::VE::A:::N::IY: rrnAC0330 ::::::::::::::SN:::ML:I:::::::::::V:S:::::::::V:::::::::::Y: Hmu1209 :::::::::::::::N:::ML:I:::::::::::::S:::::DIV:V::::::V:::::: consensus DYPLIGDAERVLEQLDDAMPRAPDADEWREQCQEWKAEYPMDYATPEDEPLKPQFVVERF #oth ...12...43322116313654.2132.221.42.142..11.22.211.2...21..43 hla2446 ::::::::::I::::TA:VRE::::EA::DR:A:::ET::LT::::::::::::::::A: HVO_1508 :::VV:::G:AI:RV:AELDEG:::R::VD::LA::DD::::::A:DN::::::::::AL Hbo0045 :::VV:::ATA:R::S:EVAQK:::R::::::RT::S:::::::::::::::::::::CL HQ2702A :::::::::T::::::G:IETT:ETA::C:::V::QET::::::M::::::::::I::VM NP2202A ::::::::KA:TK::AT::N:S:A::Q::K::::::T:::::::A:G:D:V:::Y::::Y Hut1328 ::::L::::::::::E::LTD::::::::::::T::::::L::EA:::::I:::H::::: rrnAC0330 ::::::::RN::R::F:::::::::::::D:::T::D::::::D::D:::::::Y:::Q: Hmu1209 ::::::::RAT:R::Y::::S::::::::::::::::::::::E::D:::::::Y::::: consensus DEATDDDTIVTTGVGQHQMWASQFWTYTEPRTWVSSHGLGTMGYGVPAAIGARLAA---- #oth 2.313221..11.........2.1.111..11.1..1........2.2.1..12..2111 hla2446 :::::Y:::::::::::::::::::::::::::I:::::::::::::::V:::V::DTMG HVO_1508 ::::P:E::::S:::::::::A:Y::F::::R:::::::::::::L:::::::V::D::: Hbo0045 ::::S:R::::S:::::::::A:Y::F:::Q::::::::::::::L::::::::::E::: HQ2702A ::::AA:::::S:::::::::::Y:::::::::::::::::::::L:G:::::I::D::: NP2202A ::F::::::::::::::::::C:Y:::K::::::::::::::::::::::::K::::::: Hut1328 A:MA:::A:::::::::::::C::::::::::::::N::::::::::S::::K::::::: rrnAC0330 S:M:P:::::C::::::::::::::E::::::::::::::::::::::::::K::::::: Hmu1209 S:V:P:::::C::::::::::::::EF::::::::::::::::::A::::::K::::::: consensus -PDQEVVCFDGDGSFLMTIQELSVAVRENLDITYAVLNNEAIGMVRQWQDAFFEGRRMAS #oth 12132..12...1.....3.1.......3..1.311...111........1.211.1..1 hla2446 EQ:R::::::::::::::M:::::::::D::::I::::::Y:::::::::::Y:::H::: HVO_1508 :D:ET:::V:::A::::::::::::::::::::V:I::::Y::::::::::::::::::A Hbo0045 :D::::::I:::::::::::::::::::E::::V::::::Y::::::::::::::::::A HQ2702A :D::D:::I::::::::::::::::::::::::V::::::Y::::::::::::::::::A NP2202A ::EKD:::::::::::::C:::::::::D::V:FV::::A:::::::::::::GE:H::: Hut1328 :::R:::A::::::::::M:::::::::D:::::VI::::::::::::::G:Y::::::: rrnAC0330 ::::::::::::::::::V:G:::::::Q:::::V::::::V::::::::G:Y::::::: Hmu1209 ::::::::::::::::::V:::::::::::::::V::::::V::::::::::H::::::: consensus EYPWCPEFDKLAEAFGARGFRLDDYDEVAETIEEALDYDGPSVIDAHIDPAENVYPMVPS #oth 3.4.3.1..2...1...2.2121311113221221221...1.1.311..2...2...1. hla2446 D:T:M::::::::::::L:L:V:::::::PAV:::::::::A:::F:V::E:::L::::: HVO_1508 G:D:::Q::::::::::::WTV:S:E::PDV:::::A::::::::F:V::::::::::S: Hbo0045 Q:N::::::::::::::::W:V:::::::DA::::IE::::::::F:::::::::::::: HQ2702A ::N::::::T:::::::E:::I:E:::::::V:A::A::::::::C:::::::::::::: NP2202A ::::I::::T:::::::::::I:T:E:ADDV:Q:S::H:::::V:V::::E::::::::: Hut1328 ::Q:V::::L:::S::::::::E:H:::E:V:KQ:RE::::A::::I:::G::::::::: rrnAC0330 ::::I:Q:::::::::::::T:ES::N:E:::Q::R::::::::::::::G:::F::::: Hmu1209 ::::V:::::::::::::::::EE::N:E:::QA:RE::::A:V::I::::::::::::: consensus GGANGKFALSEDQL--- #oth ..1..2..13.31.232 hla2446 ::::::::TA::::::: HVO_1508 ::::::::::::::::: Hbo0045 :::::::::T::::::: HQ2702A :::::::::T:E::::: NP2202A ::D::L::::::::::: Hut1328 ::D::L:::::K::EGL rrnAC0330 ::D::Q:::N::H:DMI Hmu1209 ::D::L:::N:RH:EQL