| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 2385 | HQ3407A | Hut1950 | rrnAC2834 | Hmu3141 | NP1066A | hla1480 | Hbo1280 | HVO_0156 |
| 1395 | HQ3407A | 2785 | 1145 | 1239 | 1167 | 1127 | 1213 | 1498 | 1251 |
| 1690 | Hut1950 | 1145 | 2553 | 1430 | 1493 | 1412 | 1383 | 1398 | 1452 |
| 1761 | rrnAC2834 | 1239 | 1430 | 4263 | 1655 | 1474 | 1380 | 1533 | 1510 |
| 1872 | Hmu3141 | 1167 | 1493 | 1655 | 2483 | 1498 | 1552 | 1530 | 1573 |
| 1717 | NP1066A | 1127 | 1412 | 1474 | 1498 | 2421 | 1375 | 1422 | 1560 |
| 1753 | hla1480 | 1213 | 1383 | 1380 | 1552 | 1375 | 5530 | 1622 | 1573 |
| 1846 | Hbo1280 | 1498 | 1398 | 1533 | 1530 | 1422 | 1622 | 2805 | 1594 |
| 1809 | HVO_0156 | 1251 | 1452 | 1510 | 1573 | 1560 | 1573 | 1594 | 2416 |
779 symbols consensus ------------------------------------------------------------ #oth 222222222222221222222222222222122212222221222222222222223233 HQ3407A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1950 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2834 MSALWGAGSQKSTLQTTSESRPAAALGVKPRRRRGMQAALRARIRQTLPPQSRLGGSEEH Hmu3141 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP1066A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1480 LPTATTSLPRPRREQHRDPEQDDSEQRRDHRVDHGHPDHESAGLVVAPREHGGVDEERSC Hbo1280 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::MRPS HVO_0156 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 223332232323333231321223333322221222122222222222222221222222 HQ3407A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1950 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2834 KNVVQREPKHRRKRQMQRHERGRRAGRQPIGEADGDPVSNESEQQDDSDAEVRRDDAGLD Hmu3141 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP1066A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1480 DDQRLGEAKSTPDDADNRGERADVESATRVDVAEDIPGGEVGRHGEEQREQDDRPQHRHR Hbo1280 DDLYRRSDSRTTRIVDSRTIRADSRTTS:::::::::::::::::::::::::::::::: HVO_0156 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 222112222222122222212212222212222222122222222122222222222221 HQ3407A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1950 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2834 APTLEDERDDCRREGRLCGELARHVADKERRSQVEGQSVKEPGDEDGHEDREDTTAGQA: Hmu3141 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP1066A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1480 RHRLEKHGRPTGRQVKVVAESERDRGNREAVDRLRQQPETVELLDDHVDGGRSVVGARSA Hbo1280 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0156 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 HQ3407A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1950 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2834 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu3141 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP1066A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1480 GDDELPAAEQKRHHVGLVDPVDEPGELLRLVLDVFEPEPDRDRVEVEALTEICGSNDILD Hbo1280 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0156 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 HQ3407A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1950 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2834 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu3141 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP1066A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1480 RDLGVIDRDLEPAELVEHDGEAFVDGVDGVGTRTHDLPGPEDQRGRFRVRGAVDEPGELL Hbo1280 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0156 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111222221222222222222222223212 HQ3407A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1950 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2834 ::::::::::::::::::::::::::::::::REPGLEHTRGSSAARLCVLFPGATGTLI Hmu3141 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP1066A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1480 RVVVGAFEIHRDALEVELLPDPRGGNDVLYRDRLLRIGHYYLGTDLKHVKRWLVGTAILL Hbo1280 :::::::::::::::::::::::::::::::::::::::::::::::::::::::IDTLI HVO_0156 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus --------VYLLELAGED--DAFAAREAA-AAASAVERLAPGLATARGI-TDR------- #oth 223323321.5...2.3221141134..2231113.32211.1.2.22144411111111 HQ3407A ::::::::M:Y:::V::ASDETLGIA::EH::::::T:VG::::I:DE:RHN:::::::: Hut1950 ::::::::::::::::T::::::::Y::::S:::R:TVRGG:V::::::::::::::::: rrnAC2834 AARPHRSG::V:::G:Q:::::::R:::::S:::::DV::::::::::::S::::::::: Hmu3141 ::::::::::V:::::Q::::R::::::::S::TD:SL:::::::::::::::::::::: NP1066A ::::::::M:::::::D:A::P::VC::R:TRC:::::::::::::::VD:AT::::::: hla1480 RPAARLGG::W::::::E::::::::::::V::TD::L::::V:S:GSVGLA:GEAVEAD Hbo1280 RADGHAPS::C::::::EADESL::L::ER:::T::::V:::::::::VRLG:::::::: HVO_0156 ::::::::::G::::::E::::::::::E::::TG:TVV:::::::::VEPE:::::::: consensus ---VRTLAYTRRVSELIGTCDPDIESAAALLDAA-SVDREG------------------- #oth 111244.12.1224312123311321.31314..134.14.1111111111111111111 HQ3407A ::::QK:G::HHI:T:::QT:ATQ:::VT::Q::F:D:KC:NDRDKEHVTGPEMTSTRDQ Hut1950 ::::SQ::L:H::N::L::AA::LA::R::VE::::I::S:::::::::::::::::::: rrnAC2834 :::::H::F:H:ACD::::S:::::::::::S:::TI::::::::::::::::::::::: Hmu3141 ::::::::F:::A:::LA::E:TVD::S:T:::::N:::A:::::::::::::::::::: NP1066A ::::G::::::::CR:V:::S:::AA:::T:E:::::::T:::::::::::::::::::: hla1480 GTAI:R:::::AAH:A:ARTEA:LAA:::A:::::PL::S:::::::::::::::::::: Hbo1280 ::::P:::::HH::::L:RT:A:V:::V:::S::::F::::::::::::::::::::::: HVO_0156 :::A:R:::::::V::V:R:A::::A:R:VVA:::N:::::::::::::::::::::::: consensus ---SVAVRARDVRGTTGISTQAAERALGGVLVDRGFDVDLDDPDHELRALFA-----AD- #oth 1111...1111..3322111342..3..33.121.141..11.112.2131111111433 HQ3407A SLPT:::C::N::S:AH:::TSI:::::N:::NH:Y:I::E::TY::::C:::::::D:: Hut1950 ::::::::::::::A::V::::V:::::SI::E:::T::::::::::::V::GPPSTTEW rrnAC2834 :::::::::V:::AS:::D::Q:::T:::::T::::A::::::::V:Y:YLS:::::--: Hmu3141 :::::::::V:::S::::D:ER:::E::QR::::::T::::::::::::::S::::::GH NP1066A :::T::::::::::LAD:D::::::R::S:::::::E::::A:::T:V:::S:::::::: hla1480 :::T::::::N::N::D:::S::::E:::::::::::::::::::V::::::::::::GE Hbo1280 ::::::::G::::SSS:V:AS:::::::::::::::E::::::::V:::::::::::D:: HVO_0156 :::T::::::::::L:::::TD:::E::SA::::::G:::::::::::VC:S:::::E:: consensus ----------------ACALGWLAAESVRDFGDRAPTDRPFFQPGSMDPLDARALVNIAG #oth 33243242423332315111..4333351113415.111..1.....2.52...52.3.1 HQ3407A ::::::::::::::::I:L:::AVDSPMTN:DS:S::N:::::::::A:R::::C::L:A Hut1950 DGDAIAIPSAAGEDG:L::::::TV:PE:::T:::::::::::::::::AL::::G:A:: rrnAC2834 ::DPDGDEEGGTGEA:C::::::T::::::::G:Q:::::::::::::::E::::::::: Hmu3141 QQATDASEVADDADG:V::::::::T:R::Y:E:::M::::T:::::::ME:::I::::: NP1066A :::::::::::::::::A:V:::ST:TT:::T::R:::K::::::::::M::::VA:::: hla1480 RDDHEAVPGADGGDSAV:::::V:V:AA:::APK-::::::::::::S:T::::YA:L:: Hbo1280 ::::::::::::::::T:L:::E::A::::::S:::::::::::::::::::::Y::L:A HVO_0156 ::::::::::::::::::LV::T:V:A::::T::K::::::::::::A:V::::F::M:: consensus AA--PGARVLDPMCGTGGLLLEAGLVGADVVGVDAQEKMVRGARENLRAYLD-------- #oth 1421.22121...1....312..122.122115.114..13.112..5532611111121 HQ3407A GPTL:D:T:::::V::::M:I::::I::T:I:S:V:S::AV::A:::ERC:S:::::::: Hut1950 :R:::::::::::::::::::::SR:::T::::::L::::::T::::V:AGA:::::::: rrnAC2834 :G:::D:TI:::::::::::::::::::::::G:::::::S:T:K::AYA::GDGHPERA Hmu3141 :R::::R::V::::::::V:I::::A::::::T::::::::::::::DTF:::::::::: NP1066A :::::NV:I:::::::::I:V::::A::TP::::::P:::S:::Q::DH::T:::::::: hla1480 ::::::RTL::::::::::P::::I::S::IAC:::T:::::T:::::E::N::::::TA Hbo1280 GPDL:D:T:V::::::::I:I:::::::RG::N:::S::A:::::::T:::P:::::::: HVO_0156 :E::::::I:::::::::V:::::::::::::::::A:::G:::::::H:VG:::::::: consensus ------DWAVARGDATALPLRDDAADAVVFDAPYGRQSKIARDSLADLVGGALAEARRVA #oth 2222453241412..23..342124.1121.......11.2233.241132..3112.1. HQ3407A ::::TQP:HIFKS:::E::ILNETI:::I::::::::::::A:R:S:::A:::T::I::: Hut1950 :::::DEFL:C::::RR::FGT::F::::V:::::::T::SA::::V:LED:::Q::::: rrnAC2834 SYPDPGE:G:F:S::S:::VA::TV:::::::::::::R:EG:-::P::S:::G::A::: Hmu3141 :::::::F::::A:::::::::::::::::::::::::::EGE-:DAV:S::::::::I: NP1066A :::::::G::L:::::R::FA::SF:GA::::::::::::EGQ:::T:::E::E:V:::: hla1480 LDDSGP::H:::::::::::::::V:G:A:::::::::::::HE::::::::::::A::: Hbo1280 ::::DAE:D:V:::::S:::C:::::::::::::::::::::HE:S::::::::::A::: HVO_0156 ::::::SGD:V::::::::::::SM:GA::::::::::::::H::::::::::::V:::: consensus PRAVLVADRPWAAAAEAAGWTVDARFERRVHRSLTRHVHVLRR---------------- #oth 222.311..21433.341..2.434.3....1..2.2111.413111111111111111 HQ3407A ::C:IIG::SYDDI:TVV::::T::::::::::::::::::::ANTDDNSEYDIGDINY Hut1950 ::::V:G::::::V:RE:::::S:Q:Q:::::::D:FI:::D:E::::::::::::::: rrnAC2834 G:C::::::D:RE::TG:::A:TDY:K:::::::V::::::E-:::::::::::::::: Hmu3141 ::::V::::S:E::::E:::::ED::::::::::V::::::E-:::::::::::::::: NP1066A G:T::I:::::NE::D::::::AE::D::::G::::YI::::-:::::::::::::::: hla1480 S:::V::::D:RRE:R::::A:::A:::::::::::::L::D:E::::::::::::::: Hbo1280 :A:::I:::::D:E::D:::::::::::::::::D::::::S:T::::::::::::::: HVO_0156 :EC:M::::S::E:::D:::G:ERV:::::::::V:Y::L:H:::::::::::::::::