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8 genomes BUD1089 8 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2933

HVO_0486

Hbo1024

Hmu0051

Hut0855

hla0460

NP0238A

HQ1390A

Pairwise sequence scores
Consensus score1828 Hut0855 Hmu0051 NP0238A rrnAC2933 hla0460 HQ1390A HVO_0486 Hbo1024
1259Hut0855 1942 1226 1116 1149 969 911 1014 1021
1340Hmu0051 1226 1856 1269 1332 977 883 1032 1038
1236NP0238A 1116 1269 1854 1286 926 854 971 987
1333rrnAC2933 1149 1332 1286 1795 963 902 1001 1061
1253hla0460 969 977 926 963 2180 1023 1136 1135
1214HQ1390A 911 883 854 902 1023 1804 1158 1215
1421HVO_0486 1014 1032 971 1001 1136 1158 2021 1319
1392Hbo1024 1021 1038 987 1061 1135 1215 1319 1963

310 symbols
consensus       -----------------------------------------MTTETLHRPTHRDALDLLE
#oth            1111111111111111111111111132341232222222341333253.4444.45332
Hut0855         ::::::::::::::::::::::::::VTDT::GDDHGPTFER:P:LAVD:PAET:RERIA
Hmu0051         ::::::::::::::::::::::::::VTTH::GD:::::::-A::::SD:DFDA:G::V:
NP0238A         ::::::::::::::::::::::::::MTDDPSED:::::::-A:R::AE:AVGP:SS:VA
rrnAC2933       ::::::::::::::::::::::::::::::::::::::::MTAV:::TY:DPA:::::AS
hla0460         VIGRGAELVQCVTADGDDVRPTILADLALAPFLSHNPVRLVV:VTSV:D:S::E::WE::
HQ1390A         ::::::::::::::::::::::::::::::::::::::::::::TR:Y:::::::FE:::
HVO_0486        :::::::::::::::::::::::::::::::::::::::::::VN:::::::::::VH::
Hbo1024         :::::::::::::::::::::::::::::::::::::::::::AT:::::::::::Y:::

consensus       RAFDRGALVTLFGRCTVDYDGRAASTLGPGDRLVVLKPDGAALVHTDEGRQPVNWQPPGC
#oth            524342213131.2.2.3.1...3.3.11.2.1122....21....1.223........1
Hut0855         G:V:::DM::V::::R:E:::::K:::::::::L::::::T::::::::H:::::::::S
Hmu0051         :GI:A::::::::::R:::::::T::::::::H:M::::::::::::::Q::::::::::
NP0238A         DGLASD:::::::::::::E:::::E::::::H:M::::::::::::::QK:::::::::
rrnAC2933       :NA::::::::V:T:::E:E:::::S::::::H:M::::::::::::::Q::::::::::
hla0460         D::EG:D:IS:::::::S:E:::::D::A::::L:::::::::::::::::::::::::S
HQ1390A         S::EDER:L:M::L:E:Q:E:::S:::A::Q:::IY::::T:::::G:NHE::::::::S
HVO_0486        A::E::DMM:I::::::::::::T:E::::::::::::::SI::::::K:T:::::::::
Hbo1024         E::GD:RM::M::::::E:::::S:S::::E::::C::::TI::::::K:K:::::::::

consensus       THEASVRDGQLRVRSTRSTPDERLDVAFERVEQVSAFAVTDRSDLELTGSEEDLRQRILD
#oth            1.533121241211.2.23.3.5.314.1323343233111541.5.5.1.1..1321.2
Hut0855         :::VGLD:A::HIE:R:TG:E:Y:E:T::SI:Y:TTVD:::PE::S:S:T:::::E:V:E
Hmu0051         E:AVR:V::EFV:E:E::S:::L:SI:::SLSH:GV:D:::AT::S:::T:::::E::::
NP0238A         :::CR:D::A:VIE:R:E::::::EIR:SD:AH:AV:RP::EET:::E:T:A::KD:::S
rrnAC2933       E:SI::D:DS:V::::::::E:L:E:T::T:AHAA::D:::SK::A:::T:A::KD::::
hla0460         E:H:A::E::::::::::N:::T:T:R:SDIH:L::M:::GGR::T:H:::::::T:::E
HQ1390A         ::N:::::::::I:::::N:T:Q:::M:::::TI::Y::::::::K::::::::::W:::
HVO_0486        ::S::::::R:::::::TS:::::::Q::::::C::Y::N:::::::V::::::::H::S
Hbo1024         ::R::::::R:::::E::::Q:H:::::::I:::::YE:::::::Q:R::::::::::::

consensus       DPDLVEPGFEPLATERETPAGAIDIFGEDADGRPVVVELKRRRVGPDAVGQLDRYVDALE
#oth            4.412.32.4.31...313..12.11.3.22142112.........1.11..4...4.16
Hut0855         S:G:I::D::::::::S::::::::Y:::SEN:A:::::::::::::::::::::::::A
Hmu0051         ::::L::A:T::::::S::::::::Y:::::::T::::::::::::::::::::::Q::G
NP0238A         E:S:::S::R::::::::::::V:VY:::SE::TT:L:::::::::::::::::::A:::
rrnAC2933       E:G:::A::T::::::::::::V::Y:::::::TTIL:::::::::::::::G:::::::
hla0460         R:E::::::::RE:::PSS::PM:V::V::::D:::::::::::::::::::A:::R::R
HQ1390A         Q:EVI:E::D:I::::Q:T::P:::::T:NA:H:::I:::::::::S:AS::Q:::E:IT
HVO_0486        :::VL:::::::E:::QSD:::::::::::A:V:::::::::::::S:AS::R::::::H
Hbo1024         ::A:::A::V:Q::::::T::PV::::A::::K:::::::::::::S:AS::Q:::E::D

consensus       RDLHADEE-----VRGILVAPSVTDRARELLAEKGLEFVALDPEP-E-------------
#oth            21123133111112..2.....2.1.1332.24521221123155313221222122222
Hut0855         ::::::R::::::I::::::::A::::Q::::::N::::::E:M:G:E::::::::::::
Hmu0051         ::::DEA::::::I::L:::::::::::::::Q::::::S:A:PEE-:::::::::::::
NP0238A         ::::::A:::::::::::::::::E:::S::::Q:::::S:T:RD:-:::::::::::::
rrnAC2933       ::::::T:::::::::::::::::::::Q::::::::::S:E:P-:-:::::::::::::
hla0460         AE:G:E:GADTPV:::V::::::::::A:R::DR:FDH:::::T:E::::::::::::::
HQ1390A         AE:-S:TS:::::T::::::::I:::TAS::NKWDF:YCSV:I:-:-:::::::::::::
HVO_0486        :EFGD::P:::::I::V:::::::E::GDM:DRE::::::::::TG:PPVEEDEGEAEES
Hbo1024         EEF-P::G::::::::::::::::::TQ:::::N::S:::AE:IAA:ADGEGNPGGVDDE

consensus       ----------
#oth            2212111111
Hut0855         ::::::::::
Hmu0051         ::::::::::
NP0238A         ::::::::::
rrnAC2933       ::::::::::
hla0460         ::::::::::
HQ1390A         ::::::::::
HVO_0486        EKADDADADA
Hbo1024         GTARD:::::