| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 4004 | NP3226A | hla0875 | HVO_1019 | Hut1407 | rrnAC1442 | Hmu1960 | HQ1583A | Hbo0513 |
| 2109 | NP3226A | 4191 | 1536 | 1424 | 1617 | 1476 | 1670 | 1240 | 1428 |
| 2326 | hla0875 | 1536 | 4397 | 1614 | 1540 | 1633 | 1614 | 1396 | 1704 |
| 2442 | HVO_1019 | 1424 | 1614 | 4121 | 1713 | 1701 | 1749 | 1486 | 1726 |
| 2279 | Hut1407 | 1617 | 1540 | 1713 | 4228 | 1787 | 1838 | 1349 | 1559 |
| 2503 | rrnAC1442 | 1476 | 1633 | 1701 | 1787 | 4091 | 2242 | 1469 | 1689 |
| 2641 | Hmu1960 | 1670 | 1614 | 1749 | 1838 | 2242 | 4069 | 1421 | 1772 |
| 1987 | HQ1583A | 1240 | 1396 | 1486 | 1349 | 1469 | 1421 | 4399 | 1872 |
| 2365 | Hbo0513 | 1428 | 1704 | 1726 | 1559 | 1689 | 1772 | 1872 | 4169 |
671 symbols consensus -----------------------------------------ARRFAPLLLACAVLGA-IV #oth 111111111111111111222222222222223323324344443562453333345653 NP3226A :::::::::::::::::::::::::::::::::::::::::-----M:V::A:AVV:LGG hla0875 ::::::::::::::::::MPRARSPVSPASSRAASDSTASVTAVALG::VLTT:APVAA: HVO_1019 :::::::::::::::::::::::::::::::VSRRPLTTAF:VSL:V::A:A::VP:P:A Hut1407 :::::::::::::::::::::::::::::::::::::::::----VRRAF::L:V:MVV: rrnAC1442 :::::::::::::::::::::::::::::::::::::::::M:S::::--V:C::--:VL Hmu1960 :::::::::::::::::::::::::::::::::::::::::MV::::::CV:CLF--:LA HQ1583A MRLFELSTDTNTSSPVRAHRHISIDGLSMTGRRSSFAHSLLNSH:RL:I:IVLI:CIM:: Hbo0513 ::::::::::::::::::::::::::::::::::::::VSN:::LIAVA:V:TL::QSCG consensus AAAGAAVATAAATPSAPAAA------------------NPRIVAAYPNPVAAGDAGEFVV #oth 4441344245534246456511111222212222222251513243.2.425315..121 NP3226A FP::VVADGD::A:DVG:GP:::::::::::::::::::ATL:E:F:S::PR::P::::A hla0875 GD::TGSGV:GVD:EGAV:Q:::::SNDGTENRTLVAEQ:::LELF:::T::ENR::YL: HVO_1019 ::P:T:N::ES::AAD:PVS:::::::::::::G::::E::::::L:D:ATPD:R::::A Hut1407 LG::VV::DPGPNATEQTP::::::::::::::::::::AS:D:I::::::D:::::Y:: rrnAC1442 ::I:PYT::GQ:::T:T::S:::::::::::::G::PEE:S:H:V::D:::G::E::::: Hmu1960 :S:LP:::QDET:::::---::::::::::::::::::H:E::::::D:I:D:::::::: HQ1583A V:S::TA::::TS-:M:DQK::::::::::::::::::T:V::TVV:::::EN:V:::I: Hbo0513 V:V:::::VSDPD::RAVS:TGRTSAASTTAESGSNAAS:Q:L:T::::LT:::T::::: consensus VRVPAETNLT-W-LTDGEGTASLPNVTASGRVALSADPNRARNLTD-------------A #oth 244334324332422.135335321454213112143.4512432311111111111117 NP3226A ::FDGP:DT:N:T::::HA::Q:::R:M::T::F:PE:GV:::Y:::::::::::::::H hla0875 ::L:---ERGN:S:S::YYE:AV:-AN:::V::::M::ANTTP:L:DETAVAGSGGTGEP HVO_1019 :AA::G:E:S:-::A:::::V:F--:APG:A::VVT::SA:S:::::::::::::::::L Hut1407 LS:SS:::VAG:T:A:DHS::R:::A:V:::F:::T::A::::H:::::::::::::::V rrnAC1442 IT:::G:DIGQYAV:::D:::GV::T::R:::V::MA:::T:K::::::::::::::::W Hmu1960 L:L:::AE:AGYVF:::DT:V::S::SRR:::::::G:D::::H:A:::::::::::::: HQ1583A :DTDGVS::::-::::::SIITV:-:VPGET:::::A::KT:QRVE:::::::::::::I Hbo0513 :::GGVS::::-::S:::QSF:I:--PR::V:V::S:::TT:S::P:::::::::::::S consensus PVVALDG-LGLANGGERLQLR---------RNGRVVDRVRYRDAPEGE--RWNAGAGAWR #oth 2136431325.123.1324121111111114333323535.41232132344344564.4 NP3226A R:EPVE:R:L::DD:D::E:::::::::::AD::A:STA:::R::DSK::IRDFE:A::: hla0875 ELRV:::YFP::AS:D:IE::::::::::::::TA:AV:D:DR::::H::::R:DW:E:: HVO_1019 ::::PG-::D::::::TVT::VVGGDGDAAG::V:A::LS:DRSR::ALLERRD::WS:W Hut1407 ::YT:::HVP:::S::T:T:::::::::::DGD::L:T:G:E::::::LG:VEN::I::E rrnAC1442 :::G:::H:A:::::::I::Q::::::::::GN:T::A:::T:SV:::LGVI:GSVVR:Q Hmu1960 ::::V:-R::::::::H::V:::::::::::::T::::AV:::TE:::RVT::GTEPV:: HQ1583A ::RQAA-:V::S::::Q:I:N:::::::::HQSER:HE:T:S:::::::::L::TSME:I Hbo0513 :::STA-::S:S:A::::V::::::::::::::TT:HKI::E:::A::::::::ST:R:I consensus PRGATDRPVVRTGGADVTAFVLPDAPAIPIATLRSADDRILLAGYTLSSARVADALVAAA #oth 1213332413334425113.1...32442354234123.22..1.133.533213.21.4 NP3226A :L::::HRP:S:HIDEA:::::::S:DLVE:S:SGTEN:LW:::::FG:DSI::T::::: hla0875 :::YDP::::::EN:T::P:::::S:E::VEP::A::::L:::::::G:E::::L::::: HVO_1019 ::TLPQ:N:TTH:P:NA:L:::::S:GR::::::A::E:::::::VV:::::::E::::R Hut1407 :I:V::FN:R:GD:GQ:RT::::::GGL:SDV:A:::::::::A::FT:RDASET:I::S rrnAC1442 SL:::::::I:AA:GE:R::A::::S:A::RPI:N::K:VF:::::::::::::::I::Q Hmu1960 :I::::::::SAE:GH:R::::::G::V::Q:V:D::::V:::::::T:G::T::::::H HQ1583A :::VEL:S:TS::S::::::::::T:::::TAIQ::NK::::::::YA:PPMT:::LS:S Hbo0513 :L:LDL:EP:A::P::A::::::::ST:TVE::::::E:LF::::::::::::::::::H consensus ERGVRVRVLLEGSPVGGRSRRQARLLDRLVEAGVEVRVLAGPHARFRFHHAKYAVADDRA #oth 4..14121.2113...142323134.1.1342.14.323314522342..1...12.231 NP3226A N:::D::L::D:A::::MTD:::::::::TA:::D::L:::D:S:Y:H::P:::L::::S hla0875 D:::E::::I:::::::F:A:S::::::I:A::::::::D:NPE:::::::::::::::: HVO_1019 ::::Q:E::V:D:::::FP::S::V:::::D:::S:::VGD::S---:::P::::V::A: Hut1407 ::::D:Q::V::G::::M:::::::::::A:G::::NAVG:DA::VDH:::::::V:::: rrnAC1442 R::AT:::::::E:::S:TAAE:ST::::A::::S:::MT::R::Y:Y:::::::::GQ: Hmu1960 ::::T:::::::A:::::T:QG::R::::T:::I:::LIG:EY::YDY:::::::::::: HQ1583A D::::IQ::::::::::L:TA:RTQ:N::SNN:IV:QL:::TP:::AY::P::::I:NS: Hbo0513 H::::::::V::G::::V:::::ET:::::R:::P:A:V:::G:K:S::::::::V:::: consensus LVLTENWKPAGTGGRSSRGWGVV-------TDDPAVADELAATFEADASGRDARPWSEYR #oth 3.21..1.11....441.....21111111362512143.242145.33353352.432. NP3226A ::T:::F:::::::M:::::::R:::::::L::E:T::::::V::S:W:W:A:T::Q::: hla0875 I:::::::AS:::::TN::::::TGTSRSS:::G:::ND:::L:RE::AAS:::S::SF: HVO_1019 ::M:::::::::::KK::::::::::::::ARS::::AD::::::T:::LPETAS:ET:: Hut1407 M:::::::::::::::::::::::::::::LS:::IVES:VD::R:::GW:::I::Q:F: rrnAC1442 V:::::::::::::N::::::::::::::::AQ:R:V:G:NQ::QS:TGWQ:SER:G::: Hmu1960 :::::::::S::::H:::::::R::::::::NQSR:V:G::::YL::::::::::::QF: HQ1583A I::S::::::::::KN::::::H:::::::AHSR:T:S:::SV:AH:ST:Y:VI:::QA: Hbo0513 :::::::::::::::D::::::R:::::::VESMRT:E:::TV::Q:ST:CGTVS:KS:: consensus RGRSFVRGEPANGSYPTRFAPEAVSVDRVRLLTAPDNAEDALVARLDAAEDRIDVVQPRV #oth 6124.43663232312334512446265351.21.1..45212421.4.35212233234 NP3226A A:::::D:D::L:GFEK:H:::T:::NSATV:::::::D:E::SM:::::E::LIQ:V:I hla0875 NDTE:HESGT::E::::::E:P:ATTAD:E:::T:G::A:R::::I:::D::VLG:V::T HVO_1019 V::::::T:S::::::S:I::::LR::::AV:R::::::S:V::::::::R::::L::T: Hut1407 E::E:SDPK:SD::FAR:YG:QRHDARGAS::V::::::G:VIE::::::TS:::::AG: rrnAC1442 Q::Q:E:A:::T:T:::E:QA:S:V:Q:TD::VT::::QGE:::TI:D:N:S:::I::T: Hmu1960 :::::E::AVS:A::E:TV:::T:P:EETT::VT:::::PR::D:::G:QTS:::I:VSL HQ1583A TDIG:NEVL::T:Q:::Q:DA:LM:::EI:V::::G::GE:VRS:I:T::K:::::S::M Hbo0513 :::A::TDP:P:AT:::TIP::S:HATN::V::T:G::GK:VIR:::E::NQ:A::N::L consensus G-PDGRLVRALRRAADRGVRVRLLLSDAWYDREENRALAERLEEWAD-ADAPLSVRIARP #oth 333333333.121..4..15.111.231..2412.4221423643344424114132351 NP3226A DSREN::L::AV:::::::P::IH:A:S::VEDD:A::::W:TDR:ATD:L::D:::DD: hla0875 :G::N:I::::::::E:::D:H::::S:::::::::::VDE:-----:::E:IE:AVSQ: HVO_1019 E:A::PF::::K:::::::::::::GS::::E::::::::::N::::RTGS:::::L::: Hut1407 :GANQSF::::K:::::::E::::::R:::AV:::Q:V:D:::R::TK:E:S::::L::: rrnAC1442 :DWNSP:L:::::::S:::E::::::::::V::::TQT:Q:FR::::RN::::TAKV:A: Hmu1960 ::W::T:AD:::::::::::::::::S:::V::D:ER::::F::::SAN:::::::L:D: HQ1583A N::S:PYFY::VD::K::IQ:::::::::::TDK:::VVN:AS:LNA:TGL:IRAQ:VTS Hbo0513 D:::::FFA::V:::R:::T::I:::N::::AD::ERVVT:TQALR::SGV:IEA:::E: consensus RGRFGKIHAKGAVVDD-TALVGSLNWNDHAATENREVVLALRGPAAADYYGRVFDADWRG #oth 3121211.1..212.133111.....1241223...1113161552.411441122..32 NP3226A A:-YD:::T::V:::::::V::::::VRT:KA:::::LV::::EP:::::AA:::D::H: hla0875 :::::::::::L:::::::V:::::::EG::::::::L::VEDGSV::F:A:AYA::::: HVO_1019 GD:Y:A:::::V:A:::::::::::::R:S:R:::::::::SD::::A:FREA:A::::A Hut1407 :D:::::::::V:::GE:V::::::::::S:R::::::V::A:QGV:G:F::::AD::QA rrnAC1442 D::YE::::::::I::KR:V:::::::EQ:::A::::::V:H:SD::::F:A::::::GA Hmu1960 A::YE:::::::I:::RRVVL:::::::R::AN:::T::L:::S:V:::::T:::::::: HQ1583A GDQ:::::::::II::RV:::::::::E::G:K::::::E:V:DEP:T::SH::IS::Q: Hbo0513 ::Q:::V::::::::GESV::::::::::::::::::::E:D::EP:S::Q:A::S::QS consensus --GG--AD------------LPVGLLAAAAVALAVAGLALRR-VEFER------------ #oth 432423551111111111113352243222344532242333234136321222222211 NP3226A DD:ASSRS::::::::::::V:A:I:G:V::GI:::L:VV:Q:F::VGRNGTLTDWQW:: hla0875 ::::::VH::::::::::::::I:::GGLG::::G::VIA::E:A:V-:::::::::::: HVO_1019 SGR:::::::::::::::::PKP::V::::L:VV:GLA:::::L:::K:::::::::::: Hut1407 ::AV::WR:::::::::::::S:::SVVV:::TL::I:VG:::I::ADTAGSPGEDRLLA rrnAC1442 ::::::F:::::::::::::T:::VIG:LLGL:V:T:::A::::S::T:::::::::::: Hmu1960 :::R::SP::::::::::::::Y:::::V:GC:GL:LIVGGK:IR:::R::::::::::: HQ1583A YE:TDT:SRRGVNTESEPEYV::L:ALG:LA:VII::Y::YST:LSDHP::::::::::: Hbo0513 AG::DDSG::::::::::::TMWV:V:G:LASASL:::I:KKT:R::::::::::::::: consensus ----------- #oth 11111111111 NP3226A ::::::::::: hla0875 ::::::::::: HVO_1019 ::::::::::: Hut1407 EDFGDIPDREF rrnAC1442 ::::::::::: Hmu1960 ::::::::::: HQ1583A ::::::::::: Hbo0513 :::::::::::