|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 2732 | HQ3718A | HVO_0042 | Hbo1451 | hla0676 | NP5266A | Hut2201 | rrnAC2674 | Hmu3085 |
2067 | HQ3718A | 3456 | 2145 | 2194 | 1871 | 1669 | 1277 | 1731 | 1776 |
2162 | HVO_0042 | 2145 | 2936 | 2285 | 1856 | 1690 | 1305 | 1762 | 1767 |
2149 | Hbo1451 | 2194 | 2285 | 2726 | 1827 | 1671 | 1325 | 1765 | 1763 |
2072 | hla0676 | 1871 | 1856 | 1827 | 2990 | 1793 | 1411 | 1816 | 1848 |
2035 | NP5266A | 1669 | 1690 | 1671 | 1793 | 2677 | 1440 | 1913 | 1972 |
1709 | Hut2201 | 1277 | 1305 | 1325 | 1411 | 1440 | 2338 | 1622 | 1690 |
2215 | rrnAC2674 | 1731 | 1762 | 1765 | 1816 | 1913 | 1622 | 2709 | 2251 |
2236 | Hmu3085 | 1776 | 1767 | 1763 | 1848 | 1972 | 1690 | 2251 | 2719 |
468 symbols consensus MSAETDRE--------------ADD--ED------------------------------- #oth .14565431111111111111132344333223333332131111111111111111112 HQ3718A :NNDDACSHTNAHVHARMSEEIP:SKVA:SIDTVRDVNADPTTSSIVTDGGTSFTTHHNV HVO_0042 :N::I:::::::::::::::::GH:ES:TEAESAAETAADT::::::::::::::::::E Hbo1451 ::::L:D::::::::::::::::F:VQT:::::::::::::::::::::::::::::::: hla0676 ::TG:EC:::::::::::::::S::ST:STADDSSAAGTDV::::::::::::::::::V NP5266A ::ES:-PS::::::::::::::P:-:::E::::::::::::::::::::::::::::::: Hut2201 :::TRVPT::::::::::::::::VST::::::::::::::::::::::::::::::::: rrnAC2674 ::EAAS::::::::::::::::::-::TE::::::::::::::::::::::::::::::: Hmu3085 ::QTV-QA::::::::::::::P:-::QE::::::::::::::::::::::::::::::: consensus ------------------ARDLLEDLVSIPSVSGDEEAAAERLVAFFESHGREAWIDEVG #oth 312222122222222222.15..423.21..21221241.23.35..1211.1112.21. HQ3718A FDVQPGLTDGLDD::::::QT::A:::::::T::E:S::::::CR:::::::D::::S:: HVO_0042 VDADAD:TDALDEGEWVD::H::Y:M::T::::::::::::V:K::::A:D::V:::::: Hbo1451 ::::::LTDGLDE::::::QA::A::::::::::::S::::::KS:::T:D::V:::::: hla0676 A::::::GGGYPEACDTP::K::F:M:::::P::E::Q::K:::D:::AN:::::::::: NP5266A ::::::::::::::::::::::::T::::::PTPE:TEC::A:AG:::::::DVF::::: Hut2201 ::::::::::::::::::::E::I:::E:::::::V:D::AE:A:::::::::V:::D:: rrnAC2674 ::::::::::::::::::::::::AV:R:::::RN:TE::::::E:::A::::::L:::: Hmu3085 ::::::::::::::::::::::::AI:R::::TP:::R::K:::E::D:::::::V::I: consensus NVRAPADDGVLLTSHIDTVPGDIPVRVE---EDDD----GDGVLWGRGSVDAKGPLAAMA #oth ......1.3..1...1.....11..221111123211111333.....1...1.1.311. HQ3718A ::::::::I:::::::::::::V::KI::::----::::-N:::::::::::T::::::: HVO_0042 ::::::::A::::::V::::::V::K:::::----::::-::::::::::::T:::CT:: Hbo1451 ::::::::S::::::::::::EV::KI::::----::::-::::::::::::T::::::: hla0676 ::::::S:A::::::::::::::::E:QPAA:::EVGKP:EP::::::T:::T:::V::: NP5266A ::::::::S::Y::::::::::::::I::::-:G::::::GPA:::::::::::::T:L: Hut2201 ::::::::::::::::::::::::::L:::::NE::::::ET::::::::::::S::::: rrnAC2674 ::::::::::::::::::::::::::::::::::E::::::V-:::::::::::::C::: Hmu3085 ::::::::::::::::::::::::::::::::N:::::::EPE:::::::::::::C::: consensus VAAVRTGVSFVGVVGEETDSRGARHLVEDRE-EPDAVINGEPSGWDGITLGYRGFLAGTY #oth 11..2..1..2..12..13.3.2121211.233.21.1......11.1......2.3... HQ3718A ::::E:::::A:::R:::T:A::W::I:N:T:P:EI::::::::::::::::::::S::: HVO_0042 A:::E:::::::::::::S::::W:::::::::::::V:::::::::V::::::::S::: Hbo1451 ::::E:::::::::E:::S:T::W::L:::::::::::::::::::::::::::::S::: hla0676 ::::Q::::::::A::::N:::::F:::::D:A:E::V:::::::::V:::::::::::: NP5266A :::::::::::::::::V:::::::::A::::P::::V::::::C:::::::::I:Q::: Hut2201 AV:::::A::A::::::V::T:G:Y::::::I::::::::::::::::::::::L:G::: rrnAC2674 :::::::A:::::::::V::K:::F::::::S::G::::::::::E::::::::L::::: Hmu3085 :::::::A::L::::::V::::S:YVI::::GT::::V:::::::E::::::::L::::: consensus VATSESGHSSRPENNAIQDAVDWWSRVEDEFE---TDDWDPVFERVTTKPVDFDGGPTDD #oth 221.11..1...13...12.23..33.243.2211323431..12..2...512..412. HQ3718A :::::L:::::::D::::S::N:::S:AEF::SEG:HNT:G:::T::::::A::::::E: HVO_0042 IS:::L:::::::E::::S::A:::::A:F:D:::-E:R:G::DT::::::T::::::E: Hbo1451 :::::L::::::::::::S::::::::A:F:::::AE:E:G::DT::::::N:E::::E: hla0676 :N::::::T::::P::::H:I:::HG::ET::P::::PDT::::Q::::::S::::L::: NP5266A R:R:A:::T::::::::::::E:::A::SR:::::A::DT:::::::P::::I:::V::: Hut2201 ::::::::::::D::::E::I:::N:::A::A:::K:E:H:::::::C::::I:::VSS: rrnAC2674 ::::::::::::::::::::I::::S:D:::::::::E:H:::::::C:::E:N::TSS: Hmu3085 ::::::::::::D:::::::L:::AA::G::::::K:E:E:::::::C::::I:::IS:: consensus GLAVEATMDVQLRVPPEYTTDEIREVADGELERGTVHWDDPIEPVMQSPRTDVARAFRVA #oth ..2..21221.1....5312221213.132.4412.2.32311.1.4....431111131 HQ3718A ::V::S:V:::F::::Q::IED:::::E:::SD:S:::KK::P:::K::::::::::::: HVO_0042 :::::::V:::F::::RLSI:DV::::ES::T::G:::NK::P:::M::::::::::::: Hbo1451 :::::::V:::F::::HL:IED:Q:::E:::VE:S:::EK::P:::T::::E:::::::: hla0676 ::::::S:::::::::NR:V:::H:L:ET::ST:S:::KE::P:::E::::EL::::::: NP5266A :::::T:LEA::::::SMS::AV:AA::E:::T:::T:N:AV::T::::::P::::::A: Hut2201 ::S::T::R::::::::::::::::L:::H:D::::N:::WV::::T::::--------- rrnAC2674 ::S:::::::::::::::S:G::::I:::F::ND::N:::KV:::::::::SA:::::A: Hmu3085 ::S::T:::::::::::::::::::I:::H:VN:::::::KV:::::::::P::::::T: consensus IRNAGG-DPRLLRKTGTSDMNIFAGAWDCPMVTYGPGDSDLDHAPNEHLDLAEYDRAVAV #oth 115311132211.11112111322541211121111121111111212231313122241 HQ3718A ::S::::E:::::::::::::::S:::::::A:::::::::::::::::::::::S:TS: HVO_0042 :::V::VK:::::::::::::::::T:::::A:::::::::::::::::::::F:S:ID: Hbo1451 ::::D:::::::::::::::::::SE:N:::A:::::::::::::::::::::::A:IE: hla0676 ::G:::::V::::::::::::L::A::::::::::::N:::::::D:R:P:S:L:::T:: NP5266A ::KQ:::::::::::::A::::Y::E:::::::::::::::::::D:::P:::L::S::: Hut2201 ----:S:RAPFA:RSA---------------------------------------:R::I rrnAC2674 ::QQ:::E:T:::::::::::VY:KT:::::::::::::::::::::::P:D::::S::: Hmu3085 ::S::::E:T:::::::::::V::QS::::::::::::::::::::::IQ::::::S:T: consensus LEDVCERLA--------------------------------------- #oth 143222423331111111111111111111111111111111111111 HQ3718A :V:::N::TDSETKTSTVTDPDMDSETGRDQIKSRSNHRDADPEPTKA HVO_0042 :V:::::::DD::::::::::::::::::::::::::::::::::::: Hbo1451 :TN:::T:TE:::::::::::::::::::::::::::::::::::::: hla0676 :S:::RDRP::::::::::::::::::::::::::::::::::::::: NP5266A ::T:A:E::::::::::::::::::::::::::::::::::::::::: Hut2201 RASCARPAPRT::::::::::::::::::::::::::::::::::::: rrnAC2674 ::TAT:::LED::::::::::::::::::::::::::::::::::::: Hmu3085 ::::T:::L:::::::::::::::::::::::::::::::::::::::