| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 4353 | rrnAC0302 | Hmu2526 | Hut0001 | NP4926A | hla1996 | HQ3021A | HVO_2646 | Hbo2196 |
| 3532 | rrnAC0302 | 4352 | 3831 | 3250 | 3281 | 3189 | 3272 | 3298 | 3271 |
| 3625 | Hmu2526 | 3831 | 4344 | 3247 | 3285 | 3179 | 3245 | 3325 | 3262 |
| 3599 | Hut0001 | 3250 | 3247 | 4676 | 3513 | 3409 | 3291 | 3323 | 3263 |
| 3758 | NP4926A | 3281 | 3285 | 3513 | 4480 | 3574 | 3467 | 3553 | 3463 |
| 3787 | hla1996 | 3189 | 3179 | 3409 | 3574 | 4464 | 3544 | 3713 | 3521 |
| 3796 | HQ3021A | 3272 | 3245 | 3291 | 3467 | 3544 | 4459 | 3692 | 3726 |
| 3941 | HVO_2646 | 3298 | 3325 | 3323 | 3553 | 3713 | 3692 | 4416 | 3825 |
| 3842 | Hbo2196 | 3271 | 3262 | 3263 | 3463 | 3521 | 3726 | 3825 | 4384 |
637 symbols consensus MSQQ--RE--------DRDDRFSSGKDPNLRSTEVTEGADKAPHRAMFRAMGFDDEDLSS #oth .151442333222111354333362..23.1.21....211...........1..2.12. rrnAC0302 ::N:::--::::::::E:QE:--PE:::D:::::::::YE::::::::::::Y::::::: Hmu2526 ::K:::--::::::::E:TPDADE::::E:::S:::::YE::::::::::::Y::::::: Hut0001 :---::--::::::::SN:::::RD::ED:P::D::::P:::::::::::::Y::A:FD: NP4926A ::::TEPDDDAAL::::G:EPGAY:::ER:::R:::::PER:::::::::::Y::::::: hla1996 ::E:QP:SEGDGSRGR:DA:::AGE::E::::RD:::::::::::::::::::::::::: HQ3021A ::K:TH::DGA::::::A:SP::TE:::D:P::D::::::R::::::::::::::T:::: HVO_2646 ::::SP::E::::::::P::V:::::::::::::::::P::::::::::::::::::F:: Hbo2196 ::S:KR::TE::::::GDE:P::::::A::::S:::::::R:::::::::::::::::G: consensus PMIGVANPAADITPCNVHLDDVADAAIEGIDEAGGMPIEFGTITISDAISMGTEGMKASL #oth .21.11.................12.31121321...1....1................. rrnAC0302 ::::::::::::::::::::::::::YD:::DTE:::::::::::::::::::::::::: Hmu2526 ::::::::::::::::::::::::::Y:::::TE:::::::::::::::::::::::::: Hut0001 :LV:I::::::::::::::::::ET:WDAT:::::::V:::::::::::::::::::::: NP4926A :L:::P:::::::::::::::::ES:L::::::::::::::::::::::::::::::::: hla1996 :I:::P:::::::::::::::::::::::::A:::::::::::::::::::::::::::: HQ3021A ::V:I::::::::::::::::::::::::VED:::::::::::::::::::::::::::: HVO_2646 ::V::P:::::::::::::::::::::::::A::::::::::V::::::::::::::::: Hbo2196 ::V::::::::::::::::::::::::::::QS::::::::::::::::::::::::::: consensus ISREVIADSVELVSFGERMDALVTVAGCDKNLPGMMMAAIRTDLPSVFLYGGSIMPGEHD #oth ....1........2....2.11..11.....1...11.2..................1.1 rrnAC0302 ::::I::::::::T::::::GI::IG:::::M:::::::::::::::::::::::::::: Hmu2526 ::::::::::::::::::::G:::IG:::::M:::::::::::::::::::::::::::: Hut0001 :::::::::::::A::::V:G:::IG:::::M::::::M::::::::::::::::::::: NP4926A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::Q:E hla1996 :::::::::::::::::::::::::::::::::::L:::::::::::::::::::::Q:: HQ3021A :::::::::::::A::::::::::::::::::::::I:S::::::::::::::::::::: HVO_2646 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::Q:E Hbo2196 :::::::::::::A::::L:::::::::::::::::::S::::::::::::::::::::E consensus GRDVTIQNVFEGVGAYAEGDMSADELDDLERNACPGAGSCGGMFTANTMASISEALGMAP #oth ..11.111......11.3.1.122...11..1......1............11.11.2.. rrnAC0302 ::E::::::::::::V:D:E::EG:::EM::H:::::::::::::::::::::::::F:: Hmu2526 ::EI:::::::::::V:D::::E::::EM::::::::::::::::::::::::::::F:: Hut0001 ::::::VQ:::::::::T:::D::::::::::::::::A:::::::::::::::VI:L:: NP4926A ::::::VQ:::::::::Q:E::G::::::::::::::::::::::::::::L:::::L:: hla1996 ::::::VQ::::::::::::::GE:::::::H::::::::::::::::::::A::::::: HQ3021A ::::::::::::::T::::::::::::E:::H:::::::::::::::::::::::::::: HVO_2646 ::E::V::::::::T::::::::::::::::H:::::::::::::::::::::::::::: Hbo2196 :::I:V::::::::T::::E:::::::EM::::::::::::::::::::::::::::::: consensus LGSASAPAESEERYEVARRAGELAVEAVENDRRPSDILTRESFENAIALQVAIGGSTNAV #oth ....11...351..23.111..21122121212...1.112......11.1.3.....1. rrnAC0302 :::::P:::H:S:::E::::::::::V:QER:S:::F:::::::::::::::V::::::: Hmu2526 :::::P:::H:S:::E::::::::::::QEQ:::::F:S:::::::::::::V::::::: Hut0001 :::::P:::E:S::D:::ET::::::VI:ER:::::::::::::::::::T::::::::: NP4926A :::::P:::NH:::A:::::::::::V::E::H:::::::T:::::::::T:M::::::: hla1996 :::::::::NR::::::E:::::::DCI::::::::::S:::::::::::T:::::::G: HQ3021A ::::G:::::T:::DI::::::AVLD::A:::::::::SKK::::::::::::::::::: HVO_2646 ::::::::::D::::N::::::VVLDC::::::::::::KK::::::T::::T::::::: Hbo2196 ::::::::::K:::D:::::::AVLQ:::::L:::::::KK:::::::I:::V::::::: consensus LHLLALAAEAGVDLDIEDFDEISRRTPKIADLQPGGERVMNDLHEIGGVPVVIRRLLEAD #oth ..1..1....111.2.13.11..2......1.....321......2..2...111.41.1 rrnAC0302 :::::::::::I:::::T:N:::A:::::::::::::::::::::V::::::L:A:ND:G Hmu2526 ::I::::::::::::::A:N:::K:::::::::::::::::::::V::::::LNA:Y::: Hut0001 :::::M::::::E::::::::::::::::::::::::S::::::::::::::L::::::: NP4926A :::::::::::I::::::::A:::::::::::::::D:::::::::::::::::::M::: hla1996 ::::::::::D:::S:::::::::::::::N:::::S:::::::::::::::L::::::: HQ3021A ::::::::::::::T:AE::A:::::::::::::::TKT::::::::::::::::::D:G HVO_2646 :::::::::::::::::E:N::::::::::N:::::T:::::::::::I:::::::V::G Hbo2196 ::::::::::D:::S::E::::::::::::N:::::TK:::::::E::L::::::::D:G consensus LLHGDALTVTGRTIAEELEHLD----LPDDDEIDA------DFLYSVDDPKQEEGAIKIL #oth .11.111.1..2.12111232133231.332222311111111112111.2342...1.. rrnAC0302 :::::::::::N:::::::QI:::::P:TVEDL:V:::::::Y:NT:E::IH:R:::R:: Hmu2526 :::::::::::D:LGDA::AY:::::P:AIEDV:V:::::::Y:::::E::N:Q:::R:: Hut0001 ::::::M:I::::L:::I:::EEKGR::PEE:::::::::::::::I::::EP::::::: NP4926A :FD:SQ::::::::E:::A::ESEHG::T::::::::::::::::P:::::EA::::::: hla1996 ::::::M::::::L::::AE:EDRGA:::::::E:::::::::::T::::::A::::::: HQ3021A :F::::::::::::::::AE::::::::A:S::ENENDDDY:::::::::Y:T::::::: HVO_2646 :F::::M:::::::::::D::::::::::::GLE:::::::::::T::E:Y:D::::::: Hbo2196 :F::::M::::::::::::::E::::::::S:VSD::::::E:I:P::::Y::::::::: consensus TGNLAPDGAVLKVTGDDAFHHEGPARIFENEEDAMRYVQEGHIESGDVIVIRNEGPRGGP #oth 2.....1.1.1.21.21412.3..1.1.15.13..4...212111....4..1...4... rrnAC0302 S:::::::::I:I::E:HL:::::V:V::Q::G::E::::::V::::::C::::::Q::: Hmu2526 ::::::::::I:IS:EEYLR::::V:::DE:SA::K:::::::::::::G:::::::::: Hut0001 ::::::::::::A::N:E:Y:Q:::::::D:::::A::::DR:::::::I::G:::K::: NP4926A :::::::::::::::::E:Y::::::V::::::::K::::::::::::::::::::E::: hla1996 D:::::E::::::::::::Y:::::::::::::::E:::S:A:D::::::::::::T::: HQ3021A ::::::E:G::::::::::::S:::::::S:::::Q:::T::::::::::::::::Q::: HVO_2646 :::::::::::::::::::::T::::V:::::::::::::::::E::::A:::::::::: Hbo2196 :::::::::::::::::K:::T::::V::G::E::::::::::::::::C::::::K::: consensus GMREMLGVTAAVVGQGHEDDVALLTDGRFSGATRGPMIGHVAPEAAVGGPIAALEDGDEI #oth .........1..1.1..11....1.......1...111..1...132....111....21 rrnAC0302 :::::::::S::A::::AE::::F:::::::::::FS::::::::F::::::::::::T: Hmu2526 :::::::::S::A::::A:::::F:::::::::::FS::::::::Y::::::::::::T: Hut0001 :::::::::::::::::::::::::::::::G::::::::::::SF:::::G::::::TV NP4926A ::::::::::::::A::::::::::::::::G::::::::I::::F:::::G::::::H: hla1996 ::::::::::::::A:::E::::::::::::G::::::::I:::::D::::GLI::::HV HQ3021A :::::::::::::::::::::::::::::::::::::V:::::::V::::::L::::::: HVO_2646 :::::::::::::::::::::::::::::::::::::V::::::::E::::GL::::::V Hbo2196 :::::::::::::::::::::::::::::::::::::V::::::::::::::L::::::V consensus TVDIPNRELSVDLSDEELEQRLEEWDDPDPAYDSGVLAKYARDFGSAA------------ #oth .1..222313.1.213.233.2133143315.33..1...222.2.11111111111111 rrnAC0302 :I::DDH::::::TED:MQ::::GH:-:E:T:::::::::HN:::::::::::::::::: Hmu2526 :I::E:L::::::::::I::::::Y:-:::N:::::::::H::::::::::::::::::: Hut0001 :::::E:S:D:::::A:IQ:::D:R:::E:T:EN::::::H:::D:P:TMREHLVSAGYA NP4926A :::::D:TIE:::::S:::R::D:R:::E:::TN::V:::GSL::::::::::::::::: hla1996 :::::E:D:T::::E:::AE:R:::EA:A:Q:EG::::::::::A::S:::::::::::: HQ3021A :::::E:::::A:::A::AE:R:A::GA:RR::T::::::GSE::::::::::::::::: HVO_2646 :::::::::::::::::::A:K:D:EPKP:::T::::::::::::::::::::::::::: Hbo2196 :::::::::::::P:D::DA:RDD:EPR::P:S::::::::N:::::::::::::::::: consensus ----------NGAVTNPGAKRD--------------- #oth 1111111111111.11132241531221111111111 rrnAC0302 ::::::::::::::::::::W:::::::::::::::: Hmu2526 ::::::::::::::::::::W:::::::::::::::: Hut0001 SRSHFATVLE:RV:SVVWVTF:DMSPRRSCRLTWLSP NP4926A ::::::::::::::::::LHN:QH::::::::::::: hla1996 ::::::::::D::::::RLT::L:::::::::::::: HQ3021A ::::::::::::::::::::T:TQSLE:::::::::: HVO_2646 :::::::::::::::::ALT::E:::::::::::::: Hbo2196 :::::::::::::::::::::-:::::::::::::::