|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 1995 | HQ2347A | hla2186 | HVO_1197 | Hbo0363 | Hut1278 | NP4094A | rrnAC0778 | Hmu0753 |
1465 | HQ2347A | 2088 | 1203 | 1326 | 1404 | 1181 | 1109 | 1207 | 1259 |
1502 | hla2186 | 1203 | 1963 | 1312 | 1398 | 1178 | 1206 | 1212 | 1247 |
1574 | HVO_1197 | 1326 | 1312 | 2014 | 1555 | 1218 | 1223 | 1276 | 1243 |
1638 | Hbo0363 | 1404 | 1398 | 1555 | 1993 | 1243 | 1187 | 1276 | 1268 |
1430 | Hut1278 | 1181 | 1178 | 1218 | 1243 | 1977 | 1224 | 1265 | 1281 |
1404 | NP4094A | 1109 | 1206 | 1223 | 1187 | 1224 | 2046 | 1253 | 1309 |
1479 | rrnAC0778 | 1207 | 1212 | 1276 | 1276 | 1265 | 1253 | 2020 | 1491 |
1534 | Hmu0753 | 1259 | 1247 | 1243 | 1268 | 1281 | 1309 | 1491 | 2036 |
283 symbols consensus MALRRLLRGRVPWPRLEAVARELADRYD--RPE-LRVEFLDADNWLSTPMVVDDRWFVKV #oth .42..21.14241131.31133243.1122322142121.1.1....1.2211132...2 HQ2347A :QV::YV::HIE:::::::::::::::GHTADS::HI:::::::::::::I:NE:::::I hla2186 :E::::V::::D::DI:R:V:::::::::::D::M::R:::::::::::::I::DL:::: HVO_1197 :D::::V:::LG:::::T::::::R::::::DS::HIR::E:::::::::::::E::::: Hbo0363 :E::::V::::D:::::::V:D:R:::::::E:::H:R::E:::::::::::::E::::: Hut1278 ::V::::::QIA::Q:::IVETVL::::::E:A:G:::::::N::::V:L::N::Y:::I NP4094A :P::::::AS::HEQ:::I:A:V:R:F:GGD::AVDI:L:E::::::V:C::::Q::::: rrnAC0778 ::F::::::T:::EQ::G:V:AVIG:::::E:A:A::A::E::::::::L::N:Q::::: Hmu0753 ::F::F:::::::ET::G::G:MCE:::::E:S:V:::::::::::::::A::::::::L consensus ISRQNSLVHALLTTGRNLGAFSSGTE--GFFEHFGTPLEMAEHELEATRRMREIGVNAPE #oth .24.1121.111.1...1.1.11...11...11121.2...2..12.1223132.122.2 HQ2347A ::K:::V::::::A::::::::A:::GE::::::A:::::::::FT:AK:::KL:L:T:K hla2186 :T:::TI::::F:::::::V::A:::::::::RYE::Y:::L::::::QKV::::::::: HVO_1197 ::K:::::::VF:::::::::::::::::::G::::::::::::::::K:L:D::LQ::A Hbo0363 :::::::::::F:::::::::::::::::::::::::::::::::::::::::::L:::: Hut1278 ::::H::::::::::::::::T:::::::::::::::::::::::::AQ::QSV:::V:: NP4094A :GD:HT:M:::::::::I::::A:::::::::R:AS:V:::::::A::Q:T::L::A::: rrnAC0778 :TG::::::T:::A:::I:::::::::::::::::::Y:::::::A:::::::::::::: Hmu0753 :TE::::::::::A:::::::::::::::::::::::Y:::D:::A:::T:::L:::::: consensus PIEAFEVDGLGVLVLEYLPDFRTLDALDRATAARLAPTLFDALRRMHDAGLAHGDLRAEN #oth .1121.2323.11.2..213.421152462525431.52.55.432.432.2...1.2.. HQ2347A :::T::::N::I::S::::::Q:::S:NQQAETDV::II:KM::Q::ED::Y:::::::: hla2186 ::::L::GD:::V::::::E:::::E::AEDV:A::::::ET::TI:::::::::::::: HVO_1197 :V:::::::::::::::::N:H:::TAP::EVE::::E::A::AA:::NH:::::::::: Hbo0363 :V:S:::::::I::::::Q::::::K:::EVEK::::QV:SS::T:::HN:V:::::::: Hut1278 :V:::::ADY::::F::V:A:::FE:VEV:::RQ:::D::V::D:::Q:::::::::S:: NP4094A ::A:::H::Y:::::::::::::F:::SP:R::EF:::::EN:ATL:A:::::::::::: rrnAC0778 ::::::Y::M:::::::I:::EP::D:PTQ:VE:HS::V::F:N:::KD::::::F:C:: Hmu0753 ::::::YE:H:::::::I:::AV:EE:SDE::SD:::VV::F:H:::E:::::::F:::: consensus VLVADDD-----LYFIDATNVREEAIADARAYDLACALAALEPLIGAKAAVDAALDSYDA #oth 1.23313111112.1..1.2.2223431.22..2.11.1212.13.2341141.344145 HQ2347A I:LYE:::::::V::::V:::N::SV:::M:::I::::G::::HL:::STI::::S::TL hla2186 :::R:G::::::::V::::S:S:AGRES::S::::S:::::::::::A::I:::::::ST HVO_1197 :::RE:G:::::I::::::::ND:GMR:::::::::G:::::::V:P:K::T:::::::: Hbo0363 ::IV::E:::::V::::::::S::GA:::KS:::::::::I:::::::ST:N:::E::EV Hut1278 :::VEGE::::::::::::S::-GD::::::::I::::GV:S::L:PAET:GL:VEIFG: NP4094A ::::P:ADGIET:::::::H:S:G::E:::G::I:::::S:S::V:PRE::T::TAV:SS rrnAC0778 ::::HG:::::::::::::S:::A::R::::::V::::G::::::::P:::S::AQY::T Hmu0753 :::::GE:::::::::::::::DG::D:::S:::::::G::T::T:GRR:::::A:H:TP consensus DELLAARDFLDFVNIRPDHDFDAAALKGEIEKRAA-------- #oth 321.3.43.....21....1.21.422.22.23.531111111 HQ2347A S:::V:AR::::::::::::::S:V::::::T:::SAESNPAI hla2186 ::I::::Q:::::A:::::E::::::T::L::::T:::::::: HVO_1197 :A::D:V:::::::::::::::::S:::::::H:::::::::: Hbo0363 :A::D:L:::::::::::::::::::::V::Q::I:::::::: Hut1278 ET::T::::::::T:::::::::::V::::::V:TG::::::: NP4094A A::::::E:::::AL::::::::::::::L::::N:::::::: rrnAC0778 S:::::EE:::::::::::::A::EIR:AV::H:-:::::::: Hmu0753 A::::::E:::::::::::::E::G:::::::L:EQ:::::::