Home |  Text search
8 genomes BUD1111 8 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0778

HVO_1197

Hbo0363

Hmu0753

Hut1278

hla2186

NP4094A

HQ2347A

Pairwise sequence scores
Consensus score1995 HQ2347A hla2186 HVO_1197 Hbo0363 Hut1278 NP4094A rrnAC0778 Hmu0753
1465HQ2347A 2088 1203 1326 1404 1181 1109 1207 1259
1502hla2186 1203 1963 1312 1398 1178 1206 1212 1247
1574HVO_1197 1326 1312 2014 1555 1218 1223 1276 1243
1638Hbo0363 1404 1398 1555 1993 1243 1187 1276 1268
1430Hut1278 1181 1178 1218 1243 1977 1224 1265 1281
1404NP4094A 1109 1206 1223 1187 1224 2046 1253 1309
1479rrnAC0778 1207 1212 1276 1276 1265 1253 2020 1491
1534Hmu0753 1259 1247 1243 1268 1281 1309 1491 2036

283 symbols
consensus       MALRRLLRGRVPWPRLEAVARELADRYD--RPE-LRVEFLDADNWLSTPMVVDDRWFVKV
#oth            .42..21.14241131.31133243.1122322142121.1.1....1.2211132...2
HQ2347A         :QV::YV::HIE:::::::::::::::GHTADS::HI:::::::::::::I:NE:::::I
hla2186         :E::::V::::D::DI:R:V:::::::::::D::M::R:::::::::::::I::DL::::
HVO_1197        :D::::V:::LG:::::T::::::R::::::DS::HIR::E:::::::::::::E:::::
Hbo0363         :E::::V::::D:::::::V:D:R:::::::E:::H:R::E:::::::::::::E:::::
Hut1278         ::V::::::QIA::Q:::IVETVL::::::E:A:G:::::::N::::V:L::N::Y:::I
NP4094A         :P::::::AS::HEQ:::I:A:V:R:F:GGD::AVDI:L:E::::::V:C::::Q:::::
rrnAC0778       ::F::::::T:::EQ::G:V:AVIG:::::E:A:A::A::E::::::::L::N:Q:::::
Hmu0753         ::F::F:::::::ET::G::G:MCE:::::E:S:V:::::::::::::::A::::::::L

consensus       ISRQNSLVHALLTTGRNLGAFSSGTE--GFFEHFGTPLEMAEHELEATRRMREIGVNAPE
#oth            .24.1121.111.1...1.1.11...11...11121.2...2..12.1223132.122.2
HQ2347A         ::K:::V::::::A::::::::A:::GE::::::A:::::::::FT:AK:::KL:L:T:K
hla2186         :T:::TI::::F:::::::V::A:::::::::RYE::Y:::L::::::QKV:::::::::
HVO_1197        ::K:::::::VF:::::::::::::::::::G::::::::::::::::K:L:D::LQ::A
Hbo0363         :::::::::::F:::::::::::::::::::::::::::::::::::::::::::L::::
Hut1278         ::::H::::::::::::::::T:::::::::::::::::::::::::AQ::QSV:::V::
NP4094A         :GD:HT:M:::::::::I::::A:::::::::R:AS:V:::::::A::Q:T::L::A:::
rrnAC0778       :TG::::::T:::A:::I:::::::::::::::::::Y:::::::A::::::::::::::
Hmu0753         :TE::::::::::A:::::::::::::::::::::::Y:::D:::A:::T:::L::::::

consensus       PIEAFEVDGLGVLVLEYLPDFRTLDALDRATAARLAPTLFDALRRMHDAGLAHGDLRAEN
#oth            .1121.2323.11.2..213.421152462525431.52.55.432.432.2...1.2..
HQ2347A         :::T::::N::I::S::::::Q:::S:NQQAETDV::II:KM::Q::ED::Y::::::::
hla2186         ::::L::GD:::V::::::E:::::E::AEDV:A::::::ET::TI::::::::::::::
HVO_1197        :V:::::::::::::::::N:H:::TAP::EVE::::E::A::AA:::NH::::::::::
Hbo0363         :V:S:::::::I::::::Q::::::K:::EVEK::::QV:SS::T:::HN:V::::::::
Hut1278         :V:::::ADY::::F::V:A:::FE:VEV:::RQ:::D::V::D:::Q:::::::::S::
NP4094A         ::A:::H::Y:::::::::::::F:::SP:R::EF:::::EN:ATL:A::::::::::::
rrnAC0778       ::::::Y::M:::::::I:::EP::D:PTQ:VE:HS::V::F:N:::KD::::::F:C::
Hmu0753         ::::::YE:H:::::::I:::AV:EE:SDE::SD:::VV::F:H:::E:::::::F::::

consensus       VLVADDD-----LYFIDATNVREEAIADARAYDLACALAALEPLIGAKAAVDAALDSYDA
#oth            1.23313111112.1..1.2.2223431.22..2.11.1212.13.2341141.344145
HQ2347A         I:LYE:::::::V::::V:::N::SV:::M:::I::::G::::HL:::STI::::S::TL
hla2186         :::R:G::::::::V::::S:S:AGRES::S::::S:::::::::::A::I:::::::ST
HVO_1197        :::RE:G:::::I::::::::ND:GMR:::::::::G:::::::V:P:K::T::::::::
Hbo0363         ::IV::E:::::V::::::::S::GA:::KS:::::::::I:::::::ST:N:::E::EV
Hut1278         :::VEGE::::::::::::S::-GD::::::::I::::GV:S::L:PAET:GL:VEIFG:
NP4094A         ::::P:ADGIET:::::::H:S:G::E:::G::I:::::S:S::V:PRE::T::TAV:SS
rrnAC0778       ::::HG:::::::::::::S:::A::R::::::V::::G::::::::P:::S::AQY::T
Hmu0753         :::::GE:::::::::::::::DG::D:::S:::::::G::T::T:GRR:::::A:H:TP

consensus       DELLAARDFLDFVNIRPDHDFDAAALKGEIEKRAA--------
#oth            321.3.43.....21....1.21.422.22.23.531111111
HQ2347A         S:::V:AR::::::::::::::S:V::::::T:::SAESNPAI
hla2186         ::I::::Q:::::A:::::E::::::T::L::::T::::::::
HVO_1197        :A::D:V:::::::::::::::::S:::::::H::::::::::
Hbo0363         :A::D:L:::::::::::::::::::::V::Q::I::::::::
Hut1278         ET::T::::::::T:::::::::::V::::::V:TG:::::::
NP4094A         A::::::E:::::AL::::::::::::::L::::N::::::::
rrnAC0778       S:::::EE:::::::::::::A::EIR:AV::H:-::::::::
Hmu0753         A::::::E:::::::::::::E::G:::::::L:EQ:::::::