8 genomes BUD1115 8 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC2907 HVO_0103 Hbo1391 Hmu2681 Hut1997 hla0542 NP0880A HQ3430A

Pairwise sequence scores
Consensus score	1579	NP0880A	Hut1997	rrnAC2907	Hmu2681	hla0542	HVO_0103	HQ3430A	Hbo1391
1168	NP0880A	1552	1054	1022	1099	1067	985	1023	1021
1237	Hut1997	1054	1642	1188	1204	1071	1010	1089	1077
1221	rrnAC2907	1022	1188	1622	1311	1041	1008	1036	1029
1271	Hmu2681	1099	1204	1311	1610	1083	1002	1059	1070
1259	hla0542	1067	1071	1041	1083	1602	1185	1173	1151
1235	HVO_0103	985	1010	1008	1002	1185	1574	1172	1192
1279	HQ3430A	1023	1089	1036	1059	1173	1172	1586	1239
1307	Hbo1391	1021	1077	1029	1070	1151	1192	1239	1583

212 symbols
consensus       MGLLDGIRSVLGTSAEADATRDADPEDLFGMSTAYITMEADLGFDPTGEAALCFSDVDST
#oth            ..211231231.32.121..12...1.........3..2.1.2122313.....12..1.
NP0880A         ::IFETV:Q:::L:::SG:::::::::::::::::L::::E:::A:::D:::::A:::::
Hut1997         :::::::K:A::LK:::::::::::::::::::::V::A::::YE:A:::::::::::::
rrnAC2907       ::::::LK::::VK:::::::::::D:::::::::::::::::YE:::::::::A:::::
Hmu2681         ::::::LK:I:::K:::::::::::::::::::::V:::::::YA:::D:::::A:::N:
hla0542         ::IF:T::A:::::::T::::E:::::::::::::M:::::::Y:HC::::::::G::::
HVO_0103        :::F:SF:AM::I:::S:::TK:::::::::::::L::::::R::SAD:::::::S::::
HQ3430A         :::F:T::::F::N:A:::::::::::::::::::M::G::::::SV:S::::::G::::
Hbo1391         ::F::S::::::I::::::::E::::::::::::::::::::D:::V:A::::::S::::

consensus       DFADAVEEVEAILEAGEEETGTTADFHEDSHGYQWVVLEDDDPEDLVTSIHFAADTLIER
#oth            2.321333.131.51.3311..415251.4..15.21.3.222.1.11.1.....211.3
NP0880A         A:RE:R:::::V::L::AD-::::::I::::::H::::H:T:F:N::S:::::::::::E
Hut1997         ::Q::IS::RQ::A:::I::::::E:V::A:::T::::::::V::::::V:::::::V:N
rrnAC2907       ::Q::ID:::S::D::MV::::R:T:ET:D::::::::H:N:F:::L::::::::::V::
Hmu2681         ::Q::MA::::::::::VD:::::::TT:E:::D:I::H::GF::::::::::::::::A
hla0542         R:D::::T:::::::::ID:::GFHR:::D:::::F::::N::::::::::::::QF::E
HVO_0103        ::::T:DA::D::T::S:::::EFSR:T:G:::N::::A::::::::::V:::::EF:::
HQ3430A         ::::T:SD:::::R::G::::::F:L::::::WE::I:Q::N:::::::::::::EF:::
Hbo1391         :::QT::::::::K::::::::DFRLY:::::WE:::::::::::::::::::::EF:::

consensus       GYGSRLLAAVFGFERD---------GDRAYWIYSFRRGAYYPFAPKGG--RERNQSAEFK
#oth            11.......1.2.1132211111111541..1......1....2.54321341234311.
NP0880A         :F:::::::L:A::::::::::::::TT:::V:::::::::::V:T:::::Q:D:KL:::
Hut1997         :::::::::::A:RDPEDSTAWDDSDRYV::V::::::S:::::::P:E::::DAT::::
rrnAC2907       R::::::::L:S::DARS:::::::DQTV::V:::::::::::::DPHDSH:::T:::::
Hmu2681         R::::::::::A:::ERD::::::::QLV::V::::::::::::::ADESH::EA:::::
hla0542         :F::::::::::::::::::::::::VD:::::::::::::::S:::T::SD:::QV:::
HVO_0103        :::::::::L:::::::::::::::::::::::::::::::::::Q:T::ST::::L:::
HQ3430A         ::::::::::::::DA::::::::::E::::::::::::::::::RS:::NN:D:QL:::
Hbo1391         :::::::::::::::::::::::::::::::::::::::::::::ER::::NQ:DRILM:

consensus       LESVLDGELTIEDDEEYWYPLWPDRPGGHPWE
#oth            .2.2121.142.2.22....1..24323...3
NP0880A         :::SF::::A::::TS::::M::EGDT-:::G
Hut1997         :Q:::::::DL::::A:::::::EDE:-::::
rrnAC2907       :D:N:SD:I:V:::K::::::::::::Y::::
Hmu2681         :D:N::::::V:P:K::::::::::::N::::
hla0542         :Q:::::::GL::::A::::::::T::N::::
HVO_0103        :::::::::E::G::S:::::::ST:N::::D
HQ3430A         :::::T:::::::::S::::M:::AR:::::Q
Hbo1391         :::::::::EL:P:K:::::M::::E::::::