8 genomes BUD1131 8 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC2131 HVO_1801 Hbo1696 Hmu0392 Hut2119 hla1591 NP0666A HQ1055A

Pairwise sequence scores
Consensus score	769	Hmu0392	rrnAC2131	Hut2119	NP0666A	HQ1055A	hla1591	HVO_1801	Hbo1696
443	Hmu0392	757	383	423	272	306	337	338	350
464	rrnAC2131	383	778	432	281	313	291	294	310
450	Hut2119	423	432	831	270	278	292	285	315
435	NP0666A	272	281	270	761	282	336	368	356
469	HQ1055A	306	313	278	282	895	357	408	432
462	hla1591	337	291	292	336	357	769	394	388
560	HVO_1801	338	294	285	368	408	394	869	517
533	Hbo1696	350	310	315	356	432	388	517	785

122 symbols
consensus       ---------------MA-THPGVDRQALEQALADEFGGSEAERRVVARQARDLADSGQYA
#oth            1122233333233234565334214442464.3431115352212.1.212..2113353
Hmu0392         :::::::::::::::--:----::::::DE::::RYDAD:RS::I:S:::Q:::::CRI:
rrnAC2131       ::::::::::::::::RVL::::::TE:::E:R:A:DANSDIVT:::::::::SE:D:FV
Hut2119         ::::MGAAELRDFQVP:RQTA::::TQ::SQ:VET:DAESEIA:I:::::T::G::A:::
NP0666A         :::::::::::::::::YE:DYF:TA::VAG:E-T:::::T:::A:::H:::::::::::
HQ1055A         MTETPYDDQPTTHDHDDNAT:S:TMD:V::::RSA::::PG::::::::V:::::A:IVE
hla1591         :::::::::::::::--:----M:::R::K:::A::::T:::::A:::A:::::::::PS
HVO_1801        ::MAPVERVVTPTDRHGD:::AF:EESFRD:::-::::TD::::::::::::::::::AE
Hbo1696         ::::::::::::::::PS:A:SF:PEE:MTS:E:::::R::::::::::::::::::KVE

consensus       ADRGAPLTVEDVVDNLRDAPDDSPLAERWNWWLGALEAAYGG-YARFQVRRIPDAE----
#oth            3.3364.1235123214...1154232.....1.1.2311.11.53.3114433553222
Hmu0392         R:L:Y::S::::LA::D:::EGHT:V::::::::::DLSH::::E::R::--::VAGLDQ
rrnAC2131       T:F::E::::::::::A:::::YQ::::::::::::DLSH:::::::S::QDI:KTS:::
Hut2119         ::FEG:::::I:::::::::E::D:I:::::::::::LSH::::Q::R::--::VV::::
NP0666A         ::ADVK::P:H::VQ:A::::GG:-:D:::::V:S:AV:::DT::T::I:QFG:--::::
HQ1055A         M::NET:::AT:I:::S:::::LSI::::::::::::T::::::HE:::TA:::::::::
hla1591         R:::HA:::PG:I:H:G::::G:S:V::::::::::D::::D::DY:T::FVEGD:EAGL
HVO_1801        ::::::::GDEI:R:M:::::GD:-:T:::::::::::::::::RE:::::::K:-::::
Hbo1696         R:::Q:::::E::RQM:::::::TIP::::::::S:::::::::RE:::T:::NGD::::

consensus       --
#oth            22
Hmu0392         SE
rrnAC2131       ::
Hut2119         ::
NP0666A         ::
HQ1055A         ::
hla1591         RR
HVO_1801        ::
Hbo1696         ::