8 genomes BUD1132 8 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1774 HVO_0659 Hbo0868 Hmu0624 Hut0319 hla2723 NP5224A HQ1279A

Pairwise sequence scores
Consensus score	825	NP5224A	HQ1279A	Hut0319	hla2723	rrnAC1774	Hmu0624	HVO_0659	Hbo0868
669	NP5224A	846	577	586	616	626	570	618	618
650	HQ1279A	577	827	588	607	617	562	657	639
688	Hut0319	586	588	816	622	623	625	658	637
698	hla2723	616	607	622	829	667	622	661	648
712	rrnAC1774	626	617	623	667	1029	617	677	646
676	Hmu0624	570	562	625	622	617	825	655	671
741	HVO_0659	618	657	658	661	677	655	828	694
736	Hbo0868	618	639	637	648	646	671	694	835

136 symbols
consensus       ------------------------MKQAIVARADLGMGEGKLAAQVAHASLSAYEDADRR
#oth            111111111111111111111222........1.23..3..........1.1.11.1143
NP5224A         :::::::::::::::::::::MTG::::::::T:ID::T::::::::::::::::::GDE
HQ1279A         :::::::::::::::::::::::::::::::::::R::K::::::::::::::V::TGT:
Hut0319         :::::::::::::::::::::::::::::::::::N:::::::::::::A:M::::::S:
hla2723         ::::::::::::::::::::::::::::::::T:I:::::::::::::::::::Q::G::
rrnAC1774       MYSVVCATVEGVRREFKYGWPCNR::::::::::I::::::::::::::::::::::GPK
Hmu0624         ::::::::::::::::::::::::::::::::T:V::::::::::::::::M:::::::Q
HVO_0659        ::::::::::::::::::::::::::::::::::::::R:::::::::::::::::T:SQ
Hbo0868         ::::::::::::::::::::::::::::::::::::::R::::::::::::::::::::K

consensus       ARKAWKGGGQKKVVLKANGESQLFRLADEAEREGLPHAIVRDAGHTQLEPGTVTALAVGP
#oth            4434.114....1..2141.34.13...3.2141112.21......1.1....111.1..
NP5224A         ::R:::S:::::I:::GS:::::QQ:::::R::R::::L:::::::::::::::::::::
HQ1279A         SE:Q::::::::I:::::S:KK::Q:::::::D:I:::V:::::::::::::::CI:I::
Hut0319         TQS::::S::::I::Q:D::AT::K:::K::::::A::::::::::E::::::S::::::
hla2723         V::K:Q:E::::::::GDS:::::E:::K:DK::I:Y::I::::::::::::::::::::
rrnAC1774       P::::::A:::::::::TS::E::E:::V:::::::::V:::::::::D:::::::::::
Hmu0624         :TSE:::Q:::::::A:A::DA::::::D:::K:::N:::::::::::D:::::::::::
HVO_0659        T::R:::::::::::::::::E::K:::::::A:I::::I::::::::D:::::::::::
Hbo0868         :KNE:::S::::::::::::DK::::::::::Q::::::I::::::::::::::C:::::

consensus       AEDDLVDRVTGDLSLY
#oth            241251121..1.1.1
NP5224A         G:ER:::K::::::::
HQ1279A         DS:ENI::I::S::::
Hut0319         :DE:A:::::::::::
hla2723         :R::T:::::::::::
rrnAC1774       :::E:::::::::P:F
Hmu0624         :A::RI:A::::::::
HVO_0659        ::::EI::::::::::
Hbo0868         GR::::NK::::::::