|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 1529 | Hut1456 | Hmu1278 | rrnAC0054 | NP2022A | hla0937 | HQ3015A | HVO_2476 | Hbo2375 |
1014 | Hut1456 | 1497 | 875 | 873 | 893 | 808 | 803 | 818 | 781 |
1101 | Hmu1278 | 875 | 1476 | 1009 | 1000 | 899 | 840 | 847 | 856 |
1087 | rrnAC0054 | 873 | 1009 | 1620 | 1065 | 869 | 824 | 875 | 889 |
1044 | NP2022A | 893 | 1000 | 1065 | 1482 | 884 | 816 | 815 | 844 |
1132 | hla0937 | 808 | 899 | 869 | 884 | 1658 | 947 | 1009 | 1016 |
1119 | HQ3015A | 803 | 840 | 824 | 816 | 947 | 1918 | 993 | 1065 |
1194 | HVO_2476 | 818 | 847 | 875 | 815 | 1009 | 993 | 1794 | 1096 |
1140 | Hbo2375 | 781 | 856 | 889 | 844 | 1016 | 1065 | 1096 | 1628 |
266 symbols consensus VSAD----------------WPVDLRGVTESVVTTLGPNDRWNVAALGLHAPD-DG---- #oth 12444332213332332221...5.3.11.11.1.3..1211.2....12.226343222 Hut1456 ::E::::::::::::::::::::E:::I:::::::Q::DGSY:::::::S:D::--:::: Hmu1278 :T:S:::::::::::::::::::::D::::::::::::::::::::::::::AS:D:::: rrnAC0054 MTGGPSADNGPESGDSETQ::::T:A::S:T::::::::E::::::::V::::G:::::: NP2022A MP:::::::::::::::::::::::S:::::::::R:::G:::::::::F:GE:--:::: hla0937 ::D:ST::::::ASGPDG:::::A:::::::I:::::::::::::::::::::DPSD::: HQ3015A M:TV:::::::::::::::::::G:::::::I:::Y:::::::A:::::::::P:SNSTH HVO_2476 ::D:ETTDAGRRVGDRDGDD:::E::::::T::A:::::::::F::::V:::ET::DPPA Hbo2375 :TGRGEGGNGEQAGSPDG:::::S:::::::::::R:::::::::::::::::KATG::: consensus ----------------------------------------PVTATTWGRTRTRRNFHRRG #oth 2222211111111111111111111111111111111111321.2.1.2...1...413. Hut1456 ::::::::::::::::::::::::::::::::::::::::::::::::Q:::::::E:V: Hmu1278 ::::::::::::::::::::::::::::::::::::::::A:F:R:::::::W:::RE:: rrnAC0054 :::::::::::::::::::::::::::::::::::::::::A::::::::::W:::RE:: NP2022A ::::::::::::::::::::::::::::::::::::::::::::R:::::::W:::SE:: hla0937 ::::::::::::::::::::::::::::::::::::::::::::R:Y:::::W:::TE:: HQ3015A KSKDGPDKQNKESEQNTAGSYKSGSAAVESAAESETGDKSII::::::N:::::::::E: HVO_2476 STPSPP:::::::::::::::::::::::::::::::::::A::::::N:::::::::Q: Hbo2375 ::::::::::::::::::::::::::::::::::::::::V:::K:::N::::::::::: consensus GGVVQFTSDPRDFVEAALTVREEDDPVLDSADAWAEVAVERRDSGEEGGTQWVEWALRPV #oth 2121..13..13.13..3111.333.1122.2..12.311332412211.3124.216.2 Hut1456 EAH::::R::V:::::::::::IEE:I:S::::::R::::EI:A:T:D::E::::::E:: Hmu1278 E:Y::::V::V::A:::M:::::TA:::S::N:::R::::E:A::TD:::E::::T:A:I rrnAC0054 S:Y::::R::V::A::::S::::::::I::::::VT:D:::::::N::D::::::::N:: NP2022A ::Y::::H::V:::D::CS::::A:::::::::::T:D:::L:D::::D::::::::T:: hla0937 :::::::::::T::D:::::::V:::::PT::::V::T::EVA:ET::D:TIRT:::D:: HQ3015A ::::::V::::A::A::T:IY:V:E::::T:H:::::T::HLEQ::R:::::ER::IQ:I HVO_2476 ::::::V::::A:::::M:IY:R:S::::::::::::EATPV::::D:::E:ES:E:::: Hbo2375 :::I::V::::E::S::M:I:::::::::A:H::V::E:T:I:G::R:::R:EK:E:::H consensus ESAVERRTVPTINRGFAAVIDATVAASRLDVPAYDTDTLLDRLDYFAEVVERCGGERERE #oth 133.233322.1..123..111.......2..31.233.22.13..1311121..41.32 Hut1456 ::::::E::T:T:::Y::::E::::::::G:::::D:R:AA::A:::D:I::::::::QV Hmu1278 :::::H:::::T::AYY::VE:::::::::::E:::Q::R::I:::EA:::::::::::: rrnAC0054 D:T::::V:::T:::H:::VE:::::::::::S::RE::::::A::ES:::TA::::::A NP2022A :AR:::EV:::T:::YY:::E:::::::::::G:::E::RS:I:::ES::D::::D::AA hla0937 :H::V:ER::::::::S:::::::::::::::GF::AE:::::R:::D:::::::PA::: HQ3015A :TG:ID:::::::::::::::::::::::T::S::::::::::R::::T:D::::P:::A HVO_2476 DA::::TRPF::::::G::::T:::::::::::F:::D::A:::::::T::K:::K:::: Hbo2375 D:T:VSKAI::::::::::::::::::::::::::::E::S::Q::::T::K:::AA:K: consensus AFARIDEATGWRERADGR-------- #oth .1332233331334334554443221 Hut1456 :WQ:LET:VD-LPAL:::FESF:::: Hmu1278 :::VV------:::V::E:::::::: rrnAC0054 ::E:V------CDLV:ADW::::::: NP2022A ::E:L------T:Y::ID:::::::: hla0937 :::::::::::::::G:ATGAGDDEE HQ3015A :::QL:A::E::SQL:EPGTIPVFD: HVO_2476 :::::::L:::::::AA:RNESF::: Hbo2375 ::DT:::VS:::::IE--::::::::