| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 5124 | hla2160 | Hbo2628 | VNG1413 | rrnAC1000 | Hmu1646 | VNG2566 | hla0239 | VNG1533 | rrnAC0672 | HVO_1269 | Hbo0277 | Hut1336 | Hmu0484 |
| 1539 | hla2160 | 5255 | 350 | 409 | 390 | 502 | 669 | 927 | 1085 | 1001 | 394 | 1168 | 821 | 877 |
| 1570 | Hbo2628 | 350 | 4974 | 1267 | 1352 | 1406 | 697 | 734 | 889 | 887 | 587 | 885 | 932 | 888 |
| 1752 | VNG1413 | 409 | 1267 | 4069 | 1486 | 1585 | 845 | 896 | 950 | 1272 | 898 | 1156 | 971 | 1029 |
| 1935 | rrnAC1000 | 390 | 1352 | 1486 | 5324 | 2296 | 906 | 960 | 961 | 1133 | 805 | 1193 | 1014 | 1085 |
| 2087 | Hmu1646 | 502 | 1406 | 1585 | 2296 | 5275 | 889 | 1030 | 1017 | 1161 | 780 | 1186 | 1015 | 1098 |
| 2197 | VNG2566 | 669 | 697 | 845 | 906 | 889 | 5430 | 1398 | 1558 | 1643 | 962 | 1660 | 1489 | 1622 |
| 2608 | hla0239 | 927 | 734 | 896 | 960 | 1030 | 1398 | 5660 | 1949 | 1884 | 1200 | 2078 | 2008 | 1923 |
| 2682 | VNG1533 | 1085 | 889 | 950 | 961 | 1017 | 1558 | 1949 | 5453 | 1968 | 1233 | 2027 | 1868 | 2098 |
| 2781 | rrnAC0672 | 1001 | 887 | 1272 | 1133 | 1161 | 1643 | 1884 | 1968 | 5252 | 1414 | 2546 | 1854 | 1946 |
| 1768 | HVO_1269 | 394 | 587 | 898 | 805 | 780 | 962 | 1200 | 1233 | 1414 | 3175 | 1601 | 1195 | 1268 |
| 2936 | Hbo0277 | 1168 | 885 | 1156 | 1193 | 1186 | 1660 | 2078 | 2027 | 2546 | 1601 | 5443 | 1916 | 2165 |
| 2571 | Hut1336 | 821 | 932 | 971 | 1014 | 1015 | 1489 | 2008 | 1868 | 1854 | 1195 | 1916 | 5467 | 2326 |
| 2780 | Hmu0484 | 877 | 888 | 1029 | 1085 | 1098 | 1622 | 1923 | 2098 | 1946 | 1268 | 2165 | 2326 | 5300 |
836 symbols consensus --------------------------PRFEPLDAPTGLAVADPIENAQFELLTPRPVAPA #oth 111112222222222234446656766776667677257583744586666756665667 hla2160 :::::::::::::::::::VTDDAIDD:VGFEADGRT:CIR:AL:GEK:P:YFD:EPQ:Q Hbo2628 ::::::::::::::::::::::::::-MVTLTVTD::VQAVG:-DT:TAVVTADGWS:DD VNG1413 ::::::::::::::::::::::::::---------------------------------- rrnAC1000 :::::::::::::::::::::MVTWGVAG:RVGRDG:E:LDWDG:T:DPTA:VHQLHNRE Hmu1646 ::::::::::::::::MSTWGVTYAGD:SAES::SG:FEG:::TGLPALCAQLN:LSEAS VNG2566 ::::::::::::::::::::::::::MVVPLS:GH::::LN:N:Y:RRVVMR::TR:T:T hla0239 MSVTTAAAHRRRGDPAADRTRSSPMSIDID::SDAA::T:T:H:::T:::VY:D:::E:: VNG1533 ::::::::::::::::::::::::MN:A:T:TTS::::R:H:R::::::::Y:ESR:::T rrnAC0672 ::::::::::::::::::::::::MTLT:::::DRP::::I:Q::RQRYRIH::T:I:LR HVO_1269 ::::::::::::::::::::::::::---------------------------------- Hbo0277 :::::MEGFGDSESSPSFDSSETYLELSLDAASGGD:VV:T::::RH::::S::SVID:E Hut1336 :::::::::::::::::METLPLSST::::::A::::IQ:V:::DGG::TF:::D::ETD Hmu0484 ::::::::::::::::::::MVTDTT:SMTAVE::Y::RL:::::G:::T:::Q:::T:: consensus PADPD---------------------FPRPVDDAVRGETDRLELPAVVDVLTRDD-DGDL #oth 445646111111111111111111114764347347483583634774748535433665 hla2160 ::L::L:::::::::::::::::::::HV:::R::SF:AESVSI::YSS:SL::A:::E: Hbo2628 :SHE-:::::::::::::::::::::L::AAV:S:G:V:TG:K:LPG:IR:R:L:SETER VNG1413 -----:::::::::::::::::::::-----------------------------:---- rrnAC1000 ST:GEQ::::::::::::::::::::L::R:::CY::SVTE:A::::DAMV::V:T:A:- Hmu1646 SSA--:::::::::::::::::::::I::DI:ECFE::A:::SI:CSDVMV:AL::---: VNG2566 :T::ST:::::::::::::::::::::LF::EE:A:VH::::TTAKPSM:FL:::AT::P hla0239 ASPE:A::::::::::::::::::::HYF:::AS:TV::GAI:I:R:AV:E::CG:::T: VNG1533 :IATGSGHGLSRQPDAEAWHTSSDAG:AL:::S::AFD:T:IT:::L:::FVWQP::RT: rrnAC0672 E:AA:V:::::::::::::::::::::QY::G::::IR:RAI:::T::M:YV::::::AI HVO_1269 -----:::::::::::::::::::::-----------------------------:---- Hbo0277 :T::SA:::::::::::::::::::::WF:A:A:::FQ::Q:::QT::S:CI::::E:QM Hut1336 ::PK:A::::::::::::::::::::L:V:::G::SID::VIRT:YL:G:WI::G:EF:: Hmu0484 SI::ST:::::::::::::::::::::AP:::T:AVITATT::T:YQ::A:V::::ELSI consensus VA--TVGESTTLPA-GEYLLEISS---------------PVKLYLRV-DG-PASVTGTGD #oth 555759975655462362726776422212211111111873644532851454668575 hla2160 ::::RLN::MEF:R:AT:F:D:::V::::::::::::::TK-AFV:IP:V:SI:A::MT: Hbo2628 KLAAP:EGTVQ::::AP:::CVEG:::::::::::::::A:TIFI:F::::E:TM::A:G VNG1413 --::----------:---------:::::::::::::::--------:M::--------- rrnAC1000 --SG::DSP:::QE::::::TMQARAADSDRESPLGVVDDIRIHVHF:::::::LHSA:I Hmu1646 D:QYR:TTP:E::D::::::RCRTRSGASAH::::::::GPTS:::F:P::::::KPA:: VNG2566 LDAL:EPQ:V:VSHDDPR:::FQT:::::::::::::::::RT:V::PG:TTTT::M:L: hla0239 L-:::R:D:YAM::::T:HVG:DPA:::::::::::::::T::::AF:AS::F::ST:ER VNG1533 :GKT:NQ::A:Y:EQ:A:A:DVDIG::::::::::::::SM::Q:A::TD::FEIHR:D: rrnAC0672 A:EVAQF::E:::::DD:V:DPLT:::::::::::::::QI:P:M::E:A:EVE::VDS: HVO_1269 --::----------:---------:::::::::::::::--------:--:--------- Hbo0277 LGQTEHFA:ESF:R:AT:S::LFA::::::::::::::::::T:V:::NA::VTI:SDAT Hut1336 :EQC:G:DQVS::D::R:VV:F::V::::::::::::::QL::::GI::::::T:DA::: Hmu0484 ::EC:SS:R:AVGP::::YV:L::A::::::::::::::KM::::Y::E::EVVFEPGT: consensus D--TRISFDAPTDVTVGARSLHERPAATITTTDDPEDLMTAVSQLGSALKTTSPERSFPT #oth 711454435455535315437486354433346437442623353433344652511623 hla2160 SGAVELT::G::T:::::::::T::E::::VP:::TA:AE:::V:::SI:EFT::::W:: Hbo2628 :::PLL::SDCRR::::VGDRS:::E-:V:VSQT::GVA::L:VMSAGHL:AT:D::R:E VNG1413 -::--------------------------------------------------:A::LQS rrnAC1000 T:::VL::QE::SI:::FVWETNTERPHLQVPAT::G:A::ITH:SG:HH:MQ:S::H:E Hmu1646 E::FVV::WE::T::::GS:GNRAGPGR::IEPT:SG:A:GLTH:AA:HH::A:V::H:S VNG2566 :::VTV::PDAH:LQI:V::Q:SH:IGE::::T::V:V:A::E:F:A::Q:P:::::W:: hla0239 T:::::DL:::AE::L:F::::QV::G::E:PT:::S::D:::L:::::Q:::::::::: VNG1533 S:::V:::::TAT:RL::::::TA:E::::I:::VR:G:R:::LF:::::::T::::::: rrnAC0672 R:::::E::::::LLI::::Q:D:::::V:::EQ:A:V:A::ETF:::::AHD::::Y:: HVO_1269 -::--------------------------------------------------------- Hbo0277 Q:::T::::EE:E:L:::::H:K::::::::P:::RSM:R:::L::::::S::::::Y:: Hut1336 L::VEF:TSGES::V::L::Y::Q::R:::::ES:H:V:K:I::FRG::::::::::::: Hmu0484 Q::V:L::PGASELR::V:::::Q::::::::::L:A:A::L:::::::::::C:::::: consensus LRGHPPLIERGDEFSIPAALAA--PDTGITIEVPPELDALYVAAPLAYYLGATVV--PGD #oth 413411434715655427746743344436453246447344643123123153513563 hla2160 :::Y::R:RV:::LD::SP:V::::::::EVV:R:TYADV:RLST:::::::R::::I:: Hbo2628 M:AS::R::F:SVTT::DSV::RN::SAVVF:L::S::Y:VP:SS::H::::EIRVAD:A VNG1413 N:QR::A:AF::TY:::D:V:NAT:A:::EVRL:SS:RSVF:T::::F::::::TVA:DA rrnAC1000 ::::::IVTT:ETTR::EPVRQNR:E::::LR::ECEAE:L:S:::::::::E::VESR: Hmu1646 F:A::::L:L:S:T:V:S:V::ET:::::EFL::::::R:F:::::::::::::EVTDC: VNG2566 ::::::RLTV:QPD:TTHS:SR::::VDV:VG:::::G:V:AVT:::F::::RLE:::SS hla0239 :::::::::P:E::RV:DRVEP::V:S::R:V::::YRY::PVVS::::FA:D::::::: VNG1533 :::::::V::::A:DA::T:D::::::::A::I::DWGD::RVST:::::::::Q::::A rrnAC0672 ::::::AL:I::TLD:::DIDS::::::V:L:L::D:ASIF:::::S:::::SL::::AS HVO_1269 ----------------------::-------------------------------::--- Hbo0277 :::::::::::EQ:KA:PD::P:::E::::L:L:ATYRHV:::::::::::::::::E:: Hut1336 :::::::V:F:E:::A:GGARL::SPASLS::L::RW:RILP::::S:::D:DL:::::: Hmu0484 :::::::::::P:L:V::::S::::E::V::::::R::::LPITS:::::::::E::I:S consensus APRLRA-D-GVTYPLDPAP-GFERAVAALLRRVFFLDCLVRTEGLY-VDLHERDALE-AL #oth 746454335387753569615337655541455262123315346576355256633383 hla2160 ::AI:L::T:YVES:PTEGLAL:ER:EE:::TWL:::T:A::::YVKS:RY:YEQVGPK: Hbo2628 DVSPTLRTATLEHEFE:N::RYQS:::S::::::L::::::GADSNGR:VA:MEL:D:EV VNG1413 D:V:::P:H::VW:::DP::---T::P:V:S:::W::::::EATTDGPSAT:TAL:D:D: rrnAC1000 :AL:T:DGTS:HRSF:AW::SLQTG::::::K::Y::::::RVD--:-PAESGPRITS:: Hmu1646 ::V:::D:PSIR:EF:DL::::QHQC:Q::::A:::::QA:RVA--:P:RASS:G:::Q: VNG2566 T:SVT::G::HQIATF:RD:TLG::AG:::KH::T:::V::SV:::DL:TPA::T:TA:F hla0239 P::IEG::::W:H::E:D-:-:::RTGEV::QA:HF:::A::::F:P::::::ETTD:-: VNG1533 QRA:VL:::::R::FPS:S:::GD::Q:::EH::L:::V:::::::S:SM:::T:I:PT: rrnAC0672 E:::TT::T:F::S::T:R::::SE:GRT:K:L:::::VT::::FHQI:::::A:I:PYV HVO_1269 ------:-:----------:--------------------------::P::::QTV:SRT Hbo0277 T::::T::S:F::D::TTA::Y::E:ERV:KQT::::::T::::Y:Q:E::::Q:V:SD: Hut1336 RA::HL::::E:V::VGPD::Y:QRI:QI:KH::T:::V:::::::N::::::SV::ART Hmu0484 R:M:H:::::WSHS::GDD::::TT::RV:KQ::L:::VT::::M:D:P:Y:::RV:A:V consensus DL---DFDRLYDLPLAERLAAYLEVPFETVEDALPEWKLTTDVAPDPENVELLPFLADDL #oth 3311114652445342212641354253635565.5.433343715354347.1214551 hla2160 PF:::YPPK:A::SMS:::ME::::DP::::PYT:::PTEAVLR:V::AA::::H::HS: Hbo2628 G:::::A:S:SRSDID:::E:::DA::AEIS:R::D:H:SMY:S:SYDR:RT::Y:LQNV VNG1413 ::::::PA::AAASP:G:::::::T:::R:A:RV:D:H:GMH:::TY:HATT::Y:L:R: rrnAC1000 S:::::P:TVRS:SP:G::ER:ID:SD:A:NSI::::P:S:Y:S:E::R:RY::::L:R: Hmu1646 PI::::L:S:CQ:GP:A::EQC:SLSERNLDAL::D:H:S:YAK:T:GRITC::::L:R: VNG2566 :WTRD:LQ::::M:::A::Q::T:Y:Q:::LA:A:R:RH:VM::D::RPI:H:S:::N:: hla0239 ::::::WG:::::::::::GE::A::::R::PE::Q:T:::::R:::::::::::V:GE: VNG1533 GI::::LSAA::A:P::::::::G:::AVT:PHG:Q:PV:A:I::::GRIAA:::VV:G: rrnAC0672 :::::::QS::QQ::::QV:T::Q::YDVI::HI:K:R:::HID:V:A:A:Q::YVV::: HVO_1269 :I::::AEG:::A::D::::::F:L:YDQIA:LV:::::::H:::QTD:::::::VTN:: Hbo0277 :::::::AA:::R:T::QVE:::Q::Y:::AGHV:::::::H:T:T:G:::::::V:N:: Hut1336 :::::::Q::::::::::TL:::D:::::::P:T::::::A::Q:E:::ARV::::SS:: Hmu0484 :::::::PA:::Q::::QVRQ::Q::Y:A:AE:V:T::::A::V:ESSALPV::::::E: consensus ALVRTPDAAPL--------------DRDELLAAA--VDDFLRS----------------- #oth 241264757561111111111111168556645423444352556744443111111168 hla2160 :P::VRGS:DP::::::::::::::TA:APV:L:::TSPW:--::::::::::::::::: Hbo2628 PNIFL:E:K::::::::::::::::GT::R:SRS::L:::Y:ADNTAAD:::::::::EE VNG1413 :::FP:ET:S:::::::::::::::E:Q::VSRS::L:::Y:G::::::::::::::::: rrnAC1000 S:IYL::SSR::::::::::::::::Q::::DRT::LA:SY--::::::::::::::::: Hmu1646 S::YL:R:TE:::::::::::::::::::::EQT::LS:AY--::::::::::::::::: VNG2566 :V:::LPD:TP:::::::::::::::SAPA:S::::::E:M::T::::::::::::::TD hla0239 SI::S:ETVTPAMASGGDGLGFFRAP:ADTASLD::R:E:V::TAGTEPTR:::::::GA VNG1533 :NI:VH::Q:D::::::::::::::TASDAGHG:EA:SS::::RS:::::::::::::QP rrnAC0672 :I:::HQQQR:::::::::::::::NQASVP:E:::EAE:T:DDVI::::::::::::TR HVO_1269 :V::::SGTEV::::::::::::::PHS:VQ::V::::::::DDADAEDI::::::::DA Hbo0277 :I::::HTK:S::::::::::::::AGSTTQ:E:::::A::::SPQTPNA::::::::GF Hut1336 ::I:ATGDDDI::::::::::::::EPED:SE:SPD:ES:F:DGPAMPDEPVLLRGAADV Hmu0484 :V::C::DPTA::::::::::::::TDGAKADLSPK:TS:FDTSDRGGEAFV::::::RS consensus TASASRGAAAAPEV--VKPEDTDSLEHAWLGDGIPIGASKATPAAYRNRLER--APARDD #oth 545846565686584238266633543533342413235155554153157661755645 hla2160 ----PIED::D::NT::PNP:::P:---------SA:TAVL:::S:E:::Q:T:TT::G: Hbo2628 ::GNT:ATKTV:G:TP:::VLGPGRV:G::A::V::DVF:SISS::EH:ARY::PANSQS VNG1413 ----AP:PV:SV:M:::D:V:RPGRMQG::A::::VD:F:SH::S:::HD:YQRDAD::A rrnAC1000 ---L:::S:ER:P:::IE:NLREGQL:S::AP:N::D:C:TP:E::V::YRSQ:NRDT:S Hmu1646 ---TA::ET:TSG:::L:::LQAGQL::::AP:T::H:F:PL:K::H::GKYR:HRSN:Q VNG2566 :::DT::HGVI:DEF::AVPE::TM:TSYI:P:V:V:NT:LIAD::DA:FS-::HSST:S hla0239 D:::D:::V::DTDF::R::PV:TV::::V:A:V:LD:N:::LD::HR:::AG::VEQSR VNG1533 DRDQP:V::D:DD::::V:P::E:I::V::A::V:V::N:::A:D:QA::ACD::::S:P rrnAC0672 A::SDA:T:T:ETDY::E:QAH::::Q::I::S:::::::L:K::FEH::D:::DTNAE: HVO_1269 ETVR:A::TTPS:TY::::SS:::V:Q::IS::T:V::::T:::::::::Q:::E::QG: Hbo0277 :R::TQS:SLPERSY::Q::K:::::Q::::::T:::::::SLQ::::::Y:::S:TEG: Hut1336 RSGT:S:ESEVA:RV:FR:DP::::M:TFV:::::L::T:M::EMF:R:::YE:PVESGR Hmu0484 ::TR:ET:TRGLDQTVFT::PA::I:QTYV:E:::L::::MSVEE:DR:::FD::SS:ER consensus ISVVVVCNDPRMADEH-EVSDIYGSRDG-LPFDVTVHERLTRAELADVLAS--DTDFVHY #oth 451712412451731867265413623823541264665426612243156125512212 hla2160 LD:::LADS:DR:AAIRR:LSNPATP:::IN-TWK:LD:PDAEQT:A::SN:P:I:I:YC Hbo2628 L:::A:L::R::I::STDAAR::E:APSE:DL::::KK:I::::::A:FE:::HH:L::: VNG1413 :::A::L::RD::G::DA:A:::E::A:D::I:::L::::::T::TE::TT::HHE:::: rrnAC1000 QQ:A::L::EE:::::T::TE::RAA:-:::M::R:S:L:SVN:::::FRQ::P:E:::F Hmu1646 LQ:G::L::DA:CE::QI:::::EE:AAD::I:::IQS::D:T:::ATFEA::KN::::: VNG2566 V::N::::EDD:W::YS:F:L-::N:::::E:::S:TRNA:::::::::T:MG::::F:: hla0239 :::L:::::EQ:RE:G:::A:L::L::M:VQ::IE:RHD:::E:MRET:Q::::V::L:: VNG1533 :R::::::::S:DA:D:C::AV::M::F:FE::IS:RHE:STS:::T::E:::TV::L:: rrnAC0672 :TIR::Q::A::DE:RQL:DEV::T::D:::::::::DN::T:::RT::TT:::AE:F:: HVO_1269 :GIT::::::E:L::TDI:DEV::::::::S:::DA:YD:SG:::RQT::E::P:::L:: Hbo0277 :GIT:::::::::::RED:EAV::::EK::::::Q:QYE::KD::REA::T::Q:::F:: Hut1336 VR:D:IV:EEA:S::T:A:::V::T::W:ID::::I:SD::QG:::::FQR::::::L:: Hmu0484 TRIL::::::Q:S::N:V:G::::T:EW:IE::I:TR:QV:TD::::L::A:::A::F:: consensus IGHC-DDDGFRCTDGRLDATTLD-EVGT--QAFLLNACQSYDQGLALVEAGAIAGIVTLE #oth 1114138714315118235653517435217412112151392.452145.242121136 hla2160 --EL:PTK:D:IAA:S-EMVE:::GL:GAPALTVFEGTEETRL:VSV::N:GLSS::A-: Hbo2628 ::::::ES:L::P::G:AI:D:E:VSNA:::T:V::::G::YE::E:::K:SV::A::FD VNG1413 :::::AV::L::A::HVSVAD:P:ALNV::ET:F::::G:FHE::::::G:SV::A:::R rrnAC1000 ::::::EA:L::P::N:ALSS:S::AR::::T:F::::G:::E::D::KQ::V::A:::T Hmu1646 :::::E:G:L:::::T::VAEIE::SN::::T:F::::G::::::S:::R:S:::G::F: VNG2566 :::VR:GTQ:V::::A:SFDQIA:ATT:PPRV::::G:S::EL:R:FID::SQ:::I:VR hla0239 :::V:::R:MQ:::DY::L:AE:LD::V::S::::::::::Q::E:::HR:SRG:::::S VNG1533 :::T::AT::Q:V::::::RD:::TT:V::R:::::S:::HA::R:::DR:SQG::::VS rrnAC0672 :::T:EH:::V:S::K::V::V::S::I::DT::::::N::N:::G:::K:::::::::N HVO_1269 :::I::::::Q:R:::V::E::::H:::::G::F:::::::::::::::::::G::::FS Hbo0277 :::I::N:::Q:S::T:::S::S:D::M::D:::::::R::E::MH:IN::::::::::: Hut1336 :::V:::E::K:S::Y::VRS:S:S:NI::SG:::::::::V::R:::D:::VG:::::A Hmu0484 :::V::P::I:::::H:::E::T::::V::N::::::::::S::R::ID::::G:::::T consensus DVLNDQAARVGTALARLLNQGF-SIRAALGLARRRNRLGKQYAVVGDGGYTVAQSESGPP #oth 51616614631753211259.213354438444576864751633.12596346566573 hla2160 S::DPPRI:---R:LG::AV:V:PVA:SV::SEGS:GVSTR--LI::PSME::SRKVI:K Hbo2628 K::DRH::::::TFV:::IR:TGA:PRPS:RGYAPSLWAPV:RSN:RSEFPTRTLIDR:: VNG1413 K::DA:::K::::F::::LA:::P:AL::R:::::I:M::D:::::::TQ:L:VTDDRET rrnAC1000 :::DKH::L::::F::::SN:::::QR::E:::::IMMC:D:::::::T:SIVPNPAH:A Hmu1646 K::DQ:::K::::F::::VH:::::ER::Q:::::IMM::D:::::::T:ALLP:PKQ:A VNG2566 PIG::A:MLI:QNI::FV::::::P:S::AIVQ:YG:ADDK:M:L:::::Q::::K::I: hla0239 ::A:SP:TQL:RII:::M:S:::NL::::YV:K:ELIT:H::I::::::T:ICH:R::IA VNG1533 :ID::A:V:::H:I:::::D::::LL:G:SV::NVTAF:N::VT::::SAQ:V::R::M: rrnAC0672 E::::G:V:I:E:V:::::C:::PL::::TI::KKSV::G::I::::::V::::T:N:T: HVO_1269 E:I:S::VG::RT::::::G:::PLQ:S:DVV:IDSDVAH::G::::::LS:V:A:::VA Hbo0277 ::V:SS:VE::SM::::::::::P::S::::V:GE:AV:DS:I:L::::LA::::DGLY: Hut1336 NIP:PT:TSI:KT::::::S:::::AT:RSFLEKDEQ:A:R:M:::::YSNIVE:Q::A: Hmu0484 ::::KT:TEI:RTV::::::::::LLSM:::LKK::::AQR:M:::::NE:LVE::::T: consensus L-VAEITANDSD----YRVSLEAYPTANYGLGSLVNPFLPSNELCYL-PGQIDTFTVSAE #oth 6155835864545324563678553786:2635668466858:784556495:5755496 hla2160 ::LVSAAPG:::DLPIT::::LSM:VQIGSE::P:VECF-::R:ELMGTQ:VEKT::KPA Hbo2628 YRRVG:GR:GA:SEPS:GGG:S::L:RQ:PK:QS::AHAR:VC::--:------------ VNG1413 G:::HVD:V:GGD::Q:::AWTDHSM::H:-:GTPA:L:AGGNRRL-:G:NQV:::A::T rrnAC1000 -::VWLSEGETG::::FD:QCTVVSPERP:-E:YRL::DD:AA:---:N:EQTSHSL::T Hmu1646 V::KIAD:GER-:::::T::C:MLTAQSN:-DRYDL::DGREI:---:N:DTLEK::TGA VNG2566 V:::HL:TAS::SSQR::F:V:MF:SEHDS::GIYS:NFDALSQQLY:A:CTP:V:AA:Q hla0239 :::LNLGI:E:NS:::WDLVA:G::NGP::V:TMS:LN:EKD:CEHVI:F::HISDIKM: VNG1533 ::LI:LA:T:A::::::EL::VG:::::TP::::IT:YV:G:DTP::NA:H::::S:AT: rrnAC0672 N:LLDVS:TTAG:::::N:EMK::SMD:K:::AI:F::FEEC:EYF:A::SVGS:NI:SS HVO_1269 V:LC:VESL:::T::::ELAYN::::SRS:::::II:D::G:TEYF:SSQPLSKVNL:TQ Hbo0277 N:TCV::RTTEG::::FN:DYRV::GSHV:MCG::I:L:::V:TH::GS:SV:S::L:L: Hut1336 Y:YI::EG:TRTP:::IMF:IQG::SPSLSI:G:RSWHSK:FGYD:IN:TR:EEMEM:KH Hmu0484 I:S:N::QDT::G:::C:::VN::::KS:PM::::R:YITGEQK:::NS:ELN::N::V: consensus ELRDFLDLE-DIPVIYDGDLYW-SDE---LDAE----------------------- #oth 44755286716923672263521336233696697632222212211111111111 hla2160 V:IEL:NED::SILQLN:TVILE::NLTEA:I:KVAKQNSADDVQATEIANWYSLD Hbo2628 ---------:------------:---:::----::::::::::::::::::::::: VNG1413 ::ART:PRV::A::VL::QF:::A:::::AA:VVRPAQQNCGDFD::::::::::: rrnAC1000 ::A:A:GQT:SL::::::EFH::::D::::A:RLRTGF:::::::::::::::::: Hmu1646 :::EV::AK:SL:::::::FH:::E:::::VD:L:::::::::::::::::::::: VNG2566 :VQS::::DSQM::VL::S:H::APPLEVSPCSTDP:::::::::::::::::::: hla0239 :IDY::::::NT:IFFND::I::N::PAR:R:LQQR:::::::::::::::::::: VNG1533 DV:S:F:QG:VF::L:::T:T::::K::::TI:ETG:::::::::::::::::::: rrnAC0672 ::SE::QMQ:QV::KA:::::::::S:::MEL:DIS:::::::::::::::::::: HVO_1269 ::::::A:::Q::::::DTV:::---:::-:C:FLA:::::::::::::::::::: Hbo0277 ::N:::::::N::LLVN:Q:Q::::D:::::LDSL::::::::::::::::::::: Hut1336 :FDE::SR:::Y:IFINDE:T::::D:::FQID::::::::::::::::::::::: Hmu0484 R:N:::EMQ:LF:::SNDN::::::::::YSV-:::::::::::::::::::::::