|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2340 | HVO_1463 | Hbo3425 | Hbo3392 | VNG2301 | HVO_1758 | Hut2912 | Hmu1858 | hla0003 | pNG7273 |
1428 | HVO_1463 | 2420 | 1036 | 1049 | 1076 | 1090 | 1108 | 1099 | 1050 | 1168 |
1371 | Hbo3425 | 1036 | 2332 | 1071 | 1009 | 1076 | 1035 | 1025 | 1050 | 1170 |
1434 | Hbo3392 | 1049 | 1071 | 2415 | 1075 | 1084 | 1033 | 1150 | 1051 | 1129 |
1498 | VNG2301 | 1076 | 1009 | 1075 | 2327 | 1344 | 1047 | 1190 | 1025 | 1070 |
1441 | HVO_1758 | 1090 | 1076 | 1084 | 1344 | 2564 | 964 | 1086 | 985 | 955 |
1523 | Hut2912 | 1108 | 1035 | 1033 | 1047 | 964 | 2395 | 1344 | 1011 | 1153 |
1631 | Hmu1858 | 1099 | 1025 | 1150 | 1190 | 1086 | 1344 | 2363 | 1180 | 1248 |
1468 | hla0003 | 1050 | 1050 | 1051 | 1025 | 985 | 1011 | 1180 | 2493 | 1404 |
1606 | pNG7273 | 1168 | 1170 | 1129 | 1070 | 955 | 1153 | 1248 | 1404 | 2488 |
364 symbols consensus ------------MTAQDNEAA---A-DRDVVIVGGGPAGCSAGVFTARYGLDTVVFDRGR #oth 111111111111245756455113454311211....2..1111131.212.12311..1 HVO_1463 MADAERSEGTATT::T:P:T:::::F:Y::A::::::T::::::::G:::::::A::::: Hbo3425 :::::::::::::SNENAGST:::QDAH:::V::::::::::A::A::::F::::::::: Hbo3392 ::::::::::::::TS-----:::-:N:::::::::::::AV::CI::::::V:I::::N VNG2301 :::::::::::::PT::G:--:::-:R:::::::::::::A::::::::::::::::::N HVO_1758 ::::::::::::V:D:GT:LD:::-:SA:::V:::::S::A:A::::::::::::::::N Hut2912 ::::::::::::::DP:G::T::S:Y:H:::VI::::::::::I:::::::::L:::::: Hmu1858 :::::::::::::ARNS:D:N::G:T::E::::::::::::::::::::D:::::::::: hla0003 :::::::::::::SGGVDRD:VVTGL:YEA:V::::::::::A::L::E:I:VAM:N::: pNG7273 :::::::::::::V:VG:RTG::TTF:H::I:::::::::::::::::A:::::IY:::: consensus SSLRRCAYLENYLGFPAGIDVETLYDLMHDHAEAAGCDLVSDLVESVERRDD-------- #oth 11141.1211..1...1.211212351311.233112422422.2111354311111111 HVO_1463 :::Q::::::::::::G:V::::F:G:I:::V::::::::PA:::A::PAGG:::::::: Hbo3425 ::::H:G:::::::::G:::IDAF:T:::::V:::::TI:PE::S::::EG::::::::: Hbo3392 :::::::F::::::::::::I::F:K::::::VE::::::::M::::::T:G:::::::: VNG2301 AA:P:::FV:::P:::G::::P::RG:F:::::T:::::IA:T::::D:PS::::::::: HVO_1758 AA:::::::::::::::::G:D:FTA:::E:LAEV:A:Y:A:M:V::::PG:ESEVAAAS Hut2912 ::I::::H::::P:::::::I::YCE:L:::VR::::A:RE:::::::ALET:::::::: Hmu1858 :::::::H::::::::::M:I::::::F::::RE:::::R:::::::::::::::::::: hla0003 ::IA:::H:G::::::G::::::::::::::V:R:SGE::G:::::::S:AT:::::::: pNG7273 :::K::::::::::::::::::::::RIQ::::T:::SI::E::::LD:T:A:::::::: consensus ------------GFVVETQDGRRVTARRVVAATRYDGEYLRGLDDDAAMFETHEHDGEEH #oth 1222223134473.3122.214515233.2..1311131142115143224243221133 HVO_1463 :DGTETADAAGP::E:T::::ET:::::::::A::G:DF:EP::::E-::V:Y:Y:::TR Hbo3425 ::::::::::::E:RI:::::TV:R:P::::::K::AD::D:::EE--LLQPDG:G:M:- Hbo3392 ::::::::::::N:R:R::EE:S:LVP::::::TH:::::::::S:EV::D::::H::V: VNG2301 :::::::::DDT::::::::::::YTDT:L::AW:::S:::PVVG:S:-::::D:H::SR HVO_1758 EGESDAFDADARR:::R::E::::E:DH::::AW:::D::::::::D::::E:D:H::V: Hut2912 ::::::::PVAG::::TP:E:GA::::::I:::::::A::WP::A:DE:VT:SAG:S::T Hmu1858 :::::::::::D::L::L:S:DP::TD::::::::G::::LS::-E:::VT:R:::::V: hla0003 ::::::DDTEEAR:R:TP:E:EP:AT:C:::::::::::::::::::::::::D:G::TR pNG7273 ::::::::::GE:::::::::ETA:TQ::I:::::::::M::::::::::::Y::::::: consensus EHFDRDYADADGRTPIDGLYVASPSG-ADAQAIIAAGRGARVARRLLADARRERGYPEAV #oth 371.4412131.2.212.....31445345.13311.3.231114123.41343.41352 HVO_1463 TK:::::::IE:::A:::::::A:VSEVNV:::MS::Q::::G:SVIT:H:L:::::::L Hbo3425 --L:PSFS::::S::V::::::G:ISDVED:::::::H::::G:::::::::ND::WD:: Hbo3392 :E:::E::::::::S:::::::GGLAGHGE:VLV:::H:MT:G:E::::V:C:E::W:EA VNG2301 :R::DA:::::::::V::::::::G:QRS:::V::::N::H:::C::::RK:A:::::G: HVO_1758 :Q::S::::D:::::V::::::A:::DRN::VG::V:Q:GH:::C:IE:R:::::F:GDL Hut2912 D::::::P::::S:::E:::::T::P:::E::::::::::AT::T::R:H::AS:L::E: Hmu1858 :T::DT:PA:::T:::::::::::::::SR:::V:::::::T:LSVVE:V::G::V::P: hla0003 :::::E:::P::T::::::::::::E:::R:::T:::::::::::VVT:::IDD:WWP:A pNG7273 :A::NT::::::T::VP::::::::EA::M:::::::::::::::VI::T:IDD:WW:S: consensus ADHYDWVRREAELDEEWADRDRWREWF-DDRVADD--HDLDSERLARVREAEIDRRFASY #oth 1432..3.33232541152122.2131116252322263445343333.23521253343 HVO_1463 :H:W::I:P:S::AD:ETA::D:::R:::S::P::::C::AE:::REL:::DVE:QREM: Hbo3425 :AY:::::K:ST:T:::R:::::::L:::EHF:P:DGGQY:PSHIE::::EY::E:K:K: Hbo3392 :P::::L::R:A::YD:D:EET:HRR:A:H:::::::::IEQ:::Q:I:QR::EFVKSTH VNG2301 :P::::K:::SD:SG:::::::::::::AAEAG::::::::DDEF:AL:A:HL::T:DAT HVO_1758 :A::::L:ADT:FHG::G:::::::::::GE:P::::A:::D::::EL::SY:::A:DTR Hut2912 :::::::::W::::A::H::E::::YL::::::GE::-----:LTEAT::R::::IL::: Hmu1858 V::::::::R:::::::D::::::::::AQ:LP:E::L:PE:PA::S:::S::::V:E:: hla0003 :EDV::::::::RE:::::::::V:::::Q:H::A:PV:PE:::F::::::A::ETL::: pNG7273 ::GV:::::R::::D::TE:ST:V:Y:::::Y:E:APVEPG:D:FQ:::::V::E:RS:: consensus IDEDEIEARAERGQRRLADHLDDERVLD---------AIDDDTIREYLDA-D-------- #oth 4243122523331643.2342363332433333231125223545336464433333321 HVO_1463 :S:EAV:::::::RE::::::GV-----::::::::::A:SASDS:----:-:::::::: Hbo3425 ATDE::AR:TDA:TEQ:V:S:GA::L::::::::::::::::R::A:::D:-:::::::: Hbo3392 L:RS::DN:R::AH::::T:::E:LL:E:::::::::V::::RLQ::VAEQAETTGSDGR VNG2301 LSA:A::E:::A:AH::L::I-------:::::::::--:::H:ES:REQR::::::::: HVO_1758 RTDH:V::AEP::I:::VETIGT:::::::::::::::LP:EALAD:::GRELGGVEQ:: Hut2912 ::::A:AS:R::::D::LEQ:::::::ARAREIEA:::R:A::E::VTE:S::::::::: Hmu1858 V::::::R:R::::Q::L::V::DLIVERAR::::::V:E:R:AP:RA:D:-:::::::: hla0003 V:A::A:EQ:AE:G:A::::::PRA:V:AHGAEALLD:M::ED:AA:GARAR:::::::: pNG7273 :SPE::AD:T:T::ET::GY:SP:A:VSGLDQTAVLD::::E:::D::G:S:GLAEVGE: consensus ---- #oth 1111 HVO_1463 :::: Hbo3425 :::: Hbo3392 NISD VNG2301 :::: HVO_1758 :::: Hut2912 :::: Hmu1858 :::: hla0003 :::: pNG7273 ::::