|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2479 | rrnB0199 | Hbo3549 | VNG2218 | NP0558A | rrnAC2956 | Hmu3186 | hla0384 | HVO_2959 | Hbo1575 |
2044 | rrnB0199 | 2537 | 2130 | 1741 | 1891 | 1897 | 1846 | 1850 | 1844 | 1935 |
1993 | Hbo3549 | 2130 | 2535 | 1701 | 1820 | 1871 | 1848 | 1805 | 1806 | 1921 |
1944 | VNG2218 | 1741 | 1701 | 2257 | 1836 | 1850 | 1782 | 1796 | 1818 | 1816 |
2200 | NP0558A | 1891 | 1820 | 1836 | 2493 | 2078 | 2040 | 2061 | 1999 | 2005 |
2203 | rrnAC2956 | 1897 | 1871 | 1850 | 2078 | 2513 | 2119 | 2007 | 1989 | 2072 |
2134 | Hmu3186 | 1846 | 1848 | 1782 | 2040 | 2119 | 2479 | 1956 | 1892 | 1969 |
2179 | hla0384 | 1850 | 1805 | 1796 | 2061 | 2007 | 1956 | 2471 | 2112 | 2036 |
2176 | HVO_2959 | 1844 | 1806 | 1818 | 1999 | 1989 | 1892 | 2112 | 2468 | 2181 |
2233 | Hbo1575 | 1935 | 1921 | 1816 | 2005 | 2072 | 1969 | 2036 | 2181 | 2499 |
338 symbols consensus ---------SQETQNLTLVQAVRDGLYTEMERDDDVLVMGEDVGKNGGVFRATEGLYEEF #oth 111113444567424123122231112311652241211.1...2........31.41.. rrnB0199 MSSTASAQTG:KA:S::::E:IQ:::::::SQ::T:V:L::::::::::::::DQ::::: Hbo3549 MSSTAAPDSEPPIER:N::E:IC:::::::SQS:::V::::::::::::::::N:::::: VNG2218 :::::::::-----------------------------::::::Q::::::::::::::: NP0558A ::::::::M:T:::S:::::::::::KS:::::E::::L::::::::::::::::::D:: rrnAC2956 :::::MSTQDAN::S::::::::::::G:::::E::V::::::::::::::::Q::H::: Hmu3186 ::::::::M:TD::D:::::S::::::G::D::E::::L:::::E::::::::Q::I::: hla0384 :::::::::MS::::::V::::::::::::RE::::::L:Q:::::::::::::::FD:: HVO_2959 :::::::::-MSS::::I::::::::::::NL::E:::::::::::::::::::::WD:: Hbo1575 ::::::MSQ::Q::::::::::::::::::QA::R:V:::::::::::::::::::W::: consensus GDDRVIDTPLAESGIVGTAIGMAAMGLRPVPEMQFSGFMYPAFDQIVSHAARLRTRSRGR #oth 131..1......1..2.211.1.24.11..1.1..1..1..1...2...12.1.2.12.2 rrnB0199 :E::::::::::A::I:AS::L:QT:MK:::::::M::::::::::::::::::S::Q:Q Hbo3549 :EE:::::::::A::::S:::L:LS:::::A::::M::I:::::::::::::::S::H:Q VNG2218 :::::::::::::::I:S:V::::Y::K::::I::::::::G:::V:::MS::::::::: NP0558A :E:::::::::::::I:S::::::Y:::::::I::::::::G:::L:::::::::::::D rrnAC2956 ::::::::::::A:::::::::::Y:::::::::::::::::::::::::::::N::::: Hmu3186 -P::::::::::A:::::::::::H::::::::::::::::::::L:::::::::::::: hla0384 :G:::V:::::::::::A:V:::::::K::::I::::::::G:::::::M::F::::::: HVO_2959 :::::::::::::::::::::::::::K::::I::::::::G:::::::MG:F:N:T::: Hbo1575 :::::::::::::::A::::::::::M:::A::::::::::::::::::::::::::::: consensus YTCPMVLRAPYGGGIRAPEHHSESKEAFYAHEAGLKVVIPSTPYDAKGLLAASIRDPDPV #oth 122.112...1........1......1.12..1....14....311..1.2111...... rrnB0199 :SV:::I:::::::::::::::::::::FV::P:::::S::::::::::::::::::::: Hbo3549 :SV:::V:::::::::::::::::::::FV::P:::::T::::H::::::I::L:::::: VNG2218 F:L:::::::M::::::::::::::::::::::::::AM:::::::::M:I::::::::: NP0558A F::::::::::::::::::::::::::::T:::::::::::::::T:::::SA::::::: rrnAC2956 :N::LTV::::::::::::::::::::::V::::::::V::::KET::::T:A::::::: Hmu3186 F:::::V:::::::::::::::::::::::::P:::::V::::A:::::::::::::::: hla0384 FNL::T:::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_2959 ::L::::::::::::::::S::::::M::::::::::::::::::T::::ISA::::::: Hbo1575 ::::L:V::::::::::::::::::::::::::::::::::::H:T::::ISA::::::: consensus IFLEPKLIYRAFREDVPEDPYTVPLGEAAVRREGSDVSVFTWGAMTRPTLEAAENLAEE- #oth 1.1...1...1.113.1332.2.2121.32.11.4.22.2.2...11.122.11313422 rrnB0199 :::::::::::::::::TK::Q:S:N:::I::::::I::Y::::::::A:I:::::SQSH Hbo3549 ::::::::::::K:K::TGS:E:::S::SI::::::I::Y::::::::A:I::D:::D:R VNG2218 V:::::K::::::::::D:::E:E::D::::T::E:::::::::::Q::V::::::--D: NP0558A V:::::::::::::::::E:::::::::::::D:T:L::::::::V::::S:::SV::D: rrnAC2956 ::::::::::S:::E::D:::::E::::K:::::A::::::::::::::V::::E::::: Hmu3186 V:::::::::::::P:DAES:::::::::::::::::T:V:::::::::V::::E::P:: hla0384 :::::::::::::GE:::E:::::I:::VT::::G::A:::Y::::::::::::T::::: HVO_2959 ::M::::::::::GE::::D::::I:::::::::T::::::F::::::::::V:::E::: Hbo1575 :::::::::::::G:::::D:E::I:::::::::A:I::Y:Y:::::::I::::::E::: consensus GIDAEVVDLRTLSPLDRETIVESFKKTGRAAVVHEAPKTGGLGAEITATIQEEALLYQEA #oth 21.2..1.2.12..2.4111211.12....21.....11...11.14211...1.21... rrnB0199 :::V::I:::::::::I:::TD:::::::::I::::::::::::::AT:::::::VH::: Hbo3549 :V:V::::::::::::T:::::::::::::::::::::::::::::SS::::::::H::: VNG2218 R::V::::::S:::I:FD::I::::::::::I:::::N:::::::::::::::::::::: NP0558A :::V::::M:::::M:::::::::::::::V:::::::::::AG:::::::::::Y:::: rrnAC2956 ::::::I:::::::M:TD::::::::::::T:::::::::::AG::I::::::V:::::: Hmu3186 -:::::I:::::::M:TD:V:::::R::::V:::::::::::AG:VV::::::::::::: hla0384 :::C:::::::V::::::A:I:A:EA::::V:::::::::::AG::::I::::::::::: HVO_2959 ::::::::I::I::::::::::::::::::V:::::::N::::::::::V:::::::::: Hbo1575 :::::::::::V::M:K::::::::::::::::::::::::::::::T::::::::H::: consensus PVKRVTGFDVPYPLYALEDYYLPEAARIEDGIREAVEF #oth .14.11.1.2.3..221....1.342.1321.321321 rrnB0199 :I::IA:::A:M::HS:::::::Q:V::Q:::::T:D: Hbo3549 :I::I::::A:V::HGV::::::Q:V::QE::L:T::: VNG2218 ::E:I::::::F::A:::::::::P:::AA::E::FD: NP0558A ::N::::::::::::::::::M::DT::::A:::TY:A rrnAC2956 ::T:::::::::::::::::::::P:::K::::::::: Hmu3186 :IQ::::::T:F::::::::::::S:::K:::TD:C:: hla0384 :::::::::::::::::::::::T:T:::E:::::::: HVO_2959 :::::A:Y:::::::::::::::SV::V:E::::::N: Hbo1575 ::E:IA:Y:::::::::::::::SV::V:E:::N::::