|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 2418 | NP0562A | Hbo3928 | hla1158 | VNG2216 | HVO_2957 | Hbo1577 | rrnAC2959 | Hmu3189 |
1990 | NP0562A | 2398 | 1841 | 1885 | 1850 | 1887 | 1818 | 1913 | 1850 |
2108 | Hbo3928 | 1841 | 3161 | 1988 | 1936 | 2028 | 1958 | 1950 | 1941 |
2058 | hla1158 | 1885 | 1988 | 2439 | 1909 | 2002 | 1921 | 1917 | 1931 |
2117 | VNG2216 | 1850 | 1936 | 1909 | 2401 | 2000 | 1999 | 1972 | 1948 |
2229 | HVO_2957 | 1887 | 2028 | 2002 | 2000 | 2421 | 2073 | 2018 | 1948 |
2151 | Hbo1577 | 1818 | 1958 | 1921 | 1999 | 2073 | 2327 | 1950 | 1936 |
2137 | rrnAC2959 | 1913 | 1950 | 1917 | 1972 | 2018 | 1950 | 2422 | 2054 |
2090 | Hmu3189 | 1850 | 1941 | 1931 | 1948 | 1948 | 1936 | 2054 | 2398 |
405 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 NP0562A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo3928 MFLIRDCRTHQQIKRTSVNGRKNEIGRNTLEAVNSQTMPQFPTLKNQRKQLINWWRISER hla1158 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG2216 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_2957 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1577 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2959 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu3189 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ----------------------------------MSRRRKPDWLKMRPPSGRRFTDIKQT #oth 1111111111111111111111111111111112334311121122.....2...1..22 NP0562A :::::::::::::::::::::::::::::::::MS::::::E::RT:::::::::E::E: Hbo3928 IRGILIESTVYVRIALRSLQPHPQFYHGTTEAFG:TS::::::::::::::::::E:::S hla1158 :::::::::::::::::::::::::::::::::MQRG::::::::S:::::S:::E::ER VNG2216 ::::::::::::::::::::::::::::::::::::S::::E:::::::::E::::::E: HVO_2957 :::::::::::::::::::::::::::::::::::RT:::::::::::::::::::::S: Hbo1577 ::::::::::::::::::::::::::::::::::-----------::::::::::::::: rrnAC2959 :::::::::::::::::::::::::::::::::::::S:::::::::::::E:::::::: Hmu3189 :::::::::::::::::::::::::::::::::::::A:::::::S:::::::::E:::S consensus LRDRDLHTVCEEANCPNLGECWSGRDGPGTATFMLMGDRCSRGCNFCDVETGGMEPLDPD #oth ..121.1......1...1.1....2..........1.............4....31..1. NP0562A ::::::N::::::::::::D:::::::::::::::L:::::::::::::A::::D::::: Hbo3928 :::H::::::::::::::::::::H:::::::::::::::::::::::::::::S::::: hla1158 ::E::::::::::::::M::::::::::::::::::::::::::::::::::::KS::S: VNG2216 :::N:::::::::S:::M:::::::::::::::::::::::::::::::K:::::::::: HVO_2957 ::::N:N::::::::::::::::::::::::::::::::::::::::::T::::::::S: Hbo1577 :::::::::::::::::M:::::::::::::::::::::::::::::::Q:::::::::: rrnAC2959 ::::N:N:::::::::::::::::::::::::::::::::::::::::::::::D::::: Hmu3189 ::E::::::::::::::M::::::E::::::::::::::::::::::::::::::::::: consensus EPANVADAVAEIGLDYVVLTSVDRDDLPDQGAGHFAETIREIKRRDPSILVEVLIPDFQG #oth ..31..21.21................2.1.13...2...1.12..111...3.1...1. NP0562A ::::::E::::::::::::::::::::D:G::::::::::::::::T:V:::A::::::: Hbo3928 ::S::::::S:::::::::::::::::A:G:SA:::::::::::::::::::::T::::: hla1158 ::E::::::::::::::::::::::::A:G:SE:::::::::Q::::E::::T::::::: VNG2216 ::::::ES:::::::::::::::::::D::::::::R::::::E:::::::::::::::: HVO_2957 :::::::::T::::::::::::::::::::::A::::::::::::::EV::::::::::: Hbo1577 ::::::A:::::::::::::::::::::::::S:::Q::::::Q:::::::::::::::: rrnAC2959 ::QQ::::::::::::::::::::::::::::S:::::::A::E::::::::C::::::: Hmu3189 ::E:::::::D:::::::::::::::::::::::::::::A::E::::::::C:::::R: consensus DPDAVRKIIDAGPDVIAHNIETVERLQWPVRDRRAGYEQSLSVLRQVNRESDIYTKTSLM #oth 2332132.1..2...2...1...4.1.1.1.....2.1.1.2..42252111212...2. NP0562A :T:::DR::::D:::V:::V:::::::::::::::::::::D::::IAAADGC:A::::: Hbo3928 S::::QR:L::::::F:::::::N:::::::::::D:D:T:D::Q:A:D:::V:::::I: hla1158 ::E:IDR::::::::::::V:::::::::::::::D:::::A::DR:G:::::H:::::: VNG2216 EKSL:Q:::::::::::::::::A:R:V::::::::::::::::EY:T::::::::::I: HVO_2957 ::EH:::::::::::::::::::::::::I::::::::::::::Q::TD::::H::::V: Hbo1577 :EE::::::::K:::::::::::::::::::::::N::::::::E::K::::::::::I: rrnAC2959 E::L:::::::D:::::::::::D::::::::::::::::::::::::::::C:S::::: Hmu3189 EERL:EQ::::::::::::V:::Q::::::::::::::::::::G::D:::::::::::: consensus LGVGEYAHEVYQTLSDLREAGVDVVTLGQYLQPSRSHLDVFEYVHPDAFETWRRVAEDEF #oth ..1..12..1.1..1..1111..1..1........1..1.21..1.13.11.231..5.2 NP0562A :::::::::::R::G::S:V:::I::F:::::::::::E:::::T::T:DV:K::::T:: Hbo3928 ::L:::H::::::::::::V:::I:::::::::::::::::::::::V:::::DI::E:M hla1158 ::::::D::::R::G::S:V::::::F::::::::::::::::::::V:::::A:::R:: VNG2216 ::::::D:::::::G:::::::::::::::::::::::::AD::::QK::::Q::::S:: HVO_2957 ::L::H::::::::::::::D::I::F::::::::::::::::::::::::::::::::L Hbo1577 ::L:::D::I::::::::::D::::::::::::::T:::::::::::::::::Q:::::L rrnAC2959 ::::::::::::::::::Q:::::::F:::::::::::E:S::::::::D::QQ:::A:: Hmu3189 :::::::::I:::::::::V::::::::::::::::::E:S::::::::D:::::::E:L consensus GFLYCASGPMVRSSYKAGELFVDALLREGKSVEEARRAARAAAG- #oth 2.1...........11......112212.41334..341133434 NP0562A ::::::::::::::F:::::::E::E:D:LDI:A::A::ERQ--: Hbo3928 E:::::::::::::::::::::::::::::::AQ::KR::VNGD: hla1158 D:::::::::::::::::::::E::::::R:P:D:::H::::G:D VNG2216 ::::::::::::::::::::::::V:::::::Q::::N::R::SE HVO_2957 :::::::::::::::::::::::::::::S::::::Q:::::::Q Hbo1577 ::::::::::::::::::::::::IV:D:::::Q:::E::T:::S rrnAC2959 D::::::::::::::R::::::ESV::::R:AD:::AEV::ND-: Hmu3189 ::A::::::::::::R::::::E:V:-A:NDPAI:::R:::EE-: