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Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 1986 | hla0613 | VNG1903 | rrnAC3310 | Hmu2284 | NP2518A | hla0997 | HVO_2349 | Hbo2033 |
946 | hla0613 | 2787 | 646 | 764 | 770 | 850 | 803 | 866 | 875 |
1050 | VNG1903 | 646 | 1714 | 830 | 764 | 835 | 846 | 909 | 865 |
1442 | rrnAC3310 | 764 | 830 | 2021 | 1369 | 1199 | 1187 | 1234 | 1214 |
1427 | Hmu2284 | 770 | 764 | 1369 | 2009 | 1250 | 1158 | 1271 | 1213 |
1476 | NP2518A | 850 | 835 | 1199 | 1250 | 1980 | 1248 | 1306 | 1322 |
1461 | hla0997 | 803 | 846 | 1187 | 1158 | 1248 | 1988 | 1296 | 1388 |
1659 | HVO_2349 | 866 | 909 | 1234 | 1271 | 1306 | 1296 | 1985 | 1524 |
1600 | Hbo2033 | 875 | 865 | 1214 | 1213 | 1322 | 1388 | 1524 | 2017 |
382 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 hla0613 MSGSPLTVSLAATSAVPATSRQQTSATTAIFRIRLISVIRGRPRRRNTLREPLETSYQFP VNG1903 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC3310 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu2284 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP2518A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0997 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_2349 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo2033 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------MASLRDLGLSEY #oth 111111111111111111111111111111111111111111111122142111111121 hla0613 EIYCRSVGSLSSVWGARIRIPFEYRRIHAKTKFSFSATHLNILSVDRC:E::::::::S: VNG1903 ::::::::::::::::::::::::::::::::::::::::::::::::------------ rrnAC3310 ::::::::::::::::::::::::::::::::::::::::::::::MG:S:::::::::: Hmu2284 ::::::::::::::::::::::::::::::::::::::::::::::::::N::::::::: NP2518A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0997 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_2349 :::::::::::::::::::::::::::::::::::::::::::::::::T:::::::::: Hbo2033 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus EARAYRALLRTGPTTAKELSRASDVPMGRIYDVLNSLEQYNLVRSQAASRPKKYVAVEPD #oth 121121311521321122222312111..1..1.111.233.1.1.2111..1.11...3 hla0613 :D::::G::GL:TG::ADVTAE::::K:::::A:GG::SRG:::V:SDRE::R:AP:::A VNG1903 --------------------------::::::::G:I:SQH::::::::::::::::::E rrnAC3310 ::::::S::E::::::::::::::::::::::::::::T:::::::T::::::::::::: Hmu2284 :D::F:S::D::::::::::::::::::::::::::::T:::::::T:::::::AP:::: NP2518A :::::::::K:::::::::::V::::::::::::::I:::::::::S::::::::::::S hla0997 :::::::::::::::::D:::::E:::::V:::::::::H::::::::::::::A::::: HVO_2349 ::::::::::::A::::::::::::::::V::::::::::H:S::::::::::::::::: Hbo2033 ::::::S:::::A::::::::::::::::::::::::::HS::::::::::::::::::: consensus TALDRLLEDKKRELEEKAEQYENVVDELSDELEAAEPVEDQFWTAAVGPDESLDLLLERL #oth 2.12..1.41211.322241.142112.351.242222324....11.22323..13..2 hla0613 V:V:::V:A:R::::RRI:T::SGK:::I:Q:AD::TTD:R:::::::AED:::::F::V VNG1903 :::N:::::R::::Q:::T:::::::T:AR::DHPKAP::G::::EL::AAA:::W:::I rrnAC3310 ::::::::::::::Q::VG:::EI::D::SQ::S:D:::EP:::::::::N::::::::: Hmu2284 :::E::::::::Q:D:::K:::EI:::::NQ::S:::::EP::::::::A:TV:::V::: NP2518A ::::::::::::::D:::N:::SI:::::G:::T::::::T::::::::::TV:::M::I hla0997 A:::::::E::::::TQ:::::G:::D::T::D:G:::DG::::::::AEDAT::::::I HVO_2349 ::::::::S:RQ::A::::::::::A::T:::D:::::H:::::::::A::TI:::V::: Hbo2033 ::::::::T:H::::::::::QA:::D:T::::T::::QG::::::::ME::V::::::: consensus AAADDSIVMVAGTPARQ-FDLDRVGERIVDELEAALDRGVDVSVLLSPDLVDSLPESVGE #oth 2..333323.324334112123542432311.34.33...2122.221443343144223 hla0613 D::A::::V::TEVSS:::EV::E:PVLL:R:LS:IR:::::::::::AMF:DALAAID: VNG1903 D::Q:T:TL:S::::SG:::::D:SSQVF:R:AV:VE::::::::::S::A:CM:HD:N: rrnAC3310 :::::E:I::GSA:::::V:ILSGT:::::::::::E:::E::L:VR:::FE::::EANR Hmu2284 S:::ER::::GSL:G:::L::TEATD:L:::::R::Q:::E:YM::P:SF:EAV:AD::: NP2518A S:::SEV:::LSSYIE:F::I:T::TL:L:::TD:M::::::RL:MR:EVMSV::::I:: hla0997 :::ERRM:V:::A::TG::::GTI:::VT:::::::::::EIR:::::AT::A::R:::R HVO_2349 ::::::L:::::::SP::::::A::DLV:::::::::::::::M:M::G::::::::::Q Hbo2033 S:::S:L:I::::LSP::::IG::::L:TE::::::::::N::::M:::::A:::KT::K consensus RYADRLSDYDNFEVRTTENVTGTFNLIDDVEVCIEVPHPLGPGEAFAMIDLKDREFAADV #oth 317541666451431343524221422.14..11..12.164334.121.22.32.1332 hla0613 DH:VLAMAQGA:TL:V:DD:Y:N:Y::::E:::L::SD::A:DRL:G:L::R::G::TR: VNG1903 ::I:A:A:DPTY:::IGDSID:NVTI::GA:::L::SN:VQ::::::T:::Q:::::::: rrnAC3310 E:YE::FH:::YSA:ASP:IRT::E:L:G::::::::::::RE:T:GV::M::SD:T::I Hmu2284 S:QR::QQ:::YHY::::E::S::E::::I:::::::::::-:ST::V:::::P:::DEI NP2518A ::RTS:TENER:T:CIS:D:::::T::::N::T:::::::KNR:V::::::::::::QS: hla0997 ::TAD:::MEG:::::IAG:D:::SVF:GI::::::::::SAD:P:::::V::A:::TS: HVO_2349 S:M::::SRS::RA::A:::::V::::::::::::::N::N::Q:::::::::P:::::L Hbo2033 ::VT::ENHPQ:::::::QLS::::::::::::::::N::D::::::::::::A:::T:I consensus RAAFEPRWEEAEPLTL------ #oth 345.224.44153245511111 hla0613 SDG:VDA::S:DVVEEI::::: VNG1903 :::::ES:GDSTT:G-:::::: rrnAC3310 SQ:::EH:A::K:VGPP::::: Hmu2284 Y:E:::::QR:REIVGD::::: NP2518A :SE::::::Q::E::F:::::: hla0997 KDQ:::Q:G::::::FG::::: HVO_2349 ::T:D::::::A::P::::::: Hbo2033 :EM:D:::D:::::::SSFSDD