| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||
|---|---|---|---|---|---|---|---|---|
| Consensus score | 3557 | hla1383 | Hmu3308 | HVO_1484 | Hbo0061 | rrnAC0183 | VNG1505 | NP0060A |
| 1966 | hla1383 | 3632 | 1335 | 1477 | 1420 | 1456 | 1403 | 1486 |
| 2056 | Hmu3308 | 1335 | 3739 | 1527 | 1489 | 1574 | 1507 | 1593 |
| 2344 | HVO_1484 | 1477 | 1527 | 4251 | 2093 | 1559 | 1666 | 1680 |
| 2243 | Hbo0061 | 1420 | 1489 | 2093 | 4041 | 1640 | 1497 | 1639 |
| 2119 | rrnAC0183 | 1456 | 1574 | 1559 | 1640 | 3592 | 1649 | 1700 |
| 2219 | VNG1505 | 1403 | 1507 | 1666 | 1497 | 1649 | 3523 | 1714 |
| 2333 | NP0060A | 1486 | 1593 | 1680 | 1639 | 1700 | 1714 | 3565 |
603 symbols consensus -----MMRDNSAAVTDDARAGVDGDALADRIGIDAAEIEWRKEFTRFDEDDAARLSALAP #oth 2211234336536213551342.144.335321124..31.1213122351344.33433 hla1383 VSSQGTH::DELGID::T::T:::EE:LNNLE:N:::::R::RHS::::R::::::SI:D Hmu3308 ::::::KDWSNTFGDGGLN:LL:V:S:VAAC:::ES::::::::VG:::T:EQH::E:EE HVO_1484 :::::-:T:T:GQ:DAN:::R::::::LSQLD::::::DR::S:V:LSDA:ER:::D:E: Hbo0061 :::::-:DNQGL::::AN:RT:::SE::ATM:L:DE::A:::S:N::GAE:VE::ES:S: rrnAC0183 MASQHERTGPR:RI:ESD::::::VT:T::::L::G::R::::::G::GS:VDN:T:M:D VNG1505 ::::::SN::DTL::A:V:N:I::H:::::::L:E:::A::LS::GI:D:TM:A:A:EQ: NP0060A ::::::S:GM::K:::E::GAL::SQ:T:D:::::D::::::::::::::::ET:AEH:G consensus LFDAIADDIVDDFYDHLQSHEETVDVIGRSTKSVEQLKETQAAYLRGLGRGEYGKDYFAR #oth 333351123132...21423442533222.213332.232.44..45124.2.153.134 hla1383 DV::V::::::E::::ID:DP:VRA:LD::SLPMSA:VAG:RR::T:VVG:D::R::::D Hmu3308 ::R:HT:E:A:G:::N:TD:QQ:S::::::D::LQ::::::S:::VT:AS::::M:::RD HVO_1484 :L:EF::EFAAE:::::GE:A-:TKFF:::::TT:M:RAD::T:::E:::::::E::::K Hbo0061 :::G::E:V::::::Q:T:D:NSNEI::::S:GLDA::RD:I:::KS::S:::::Q::E: rrnAC0183 ETN:R:EAV::::::::::FD:::EIF:::::::D:::N::TQ:::D:VA:T:D:Q::EN VNG1505 ::E:T::AL:T::::::E:Y:R:Q:LFAN:::T:::::::::E::L:::::::DTE:A:Q NP0060A T:ER::::L:E:::::::::P::::::DS::::::M:::::RE::LN:AD:D::QS::D: consensus RARIGKIHDMLDLGPKAYLGAYSIYYEGILDAIADDVKAEFSG----------------- #oth ...1.11..21222114.1.1.32.12423432322335425111111111111111111 hla1383 :::V:RL::L:G:E:D::::Q:AV:::RLF:VL:ERAVDG-N:::::::::::::::::: Hmu3308 :::::::::L:EMPM:H:I:Q:GV::DL:FPLLF:RIEERLVD::::::::::::::::: HVO_1484 ::::::L:::I:::::F::::::V::::::G:V::E:::::T:GDTVGSDTDTEFEGDAA Hbo0061 :::V::::::::V:::F::::::::::NLIE::GA:::Q::::::::::::::::::::: rrnAC0183 ::::::::::::::::I::::::::F:HF:RT:VE:LQ---::::::::::::::::::: VNG1505 :::::::::V:G:::DV:::::TR::T:L:::L::::V:D-R:::::::::::::::::: NP0060A :::V::::::::::::::::::T::::::A::::::I:S::D:::::::::::::::::: consensus -------G-------------------DDDVAAAVDEVVDRALSVLKLLNLDQQVAMDTY #oth 233343422222232332222222222334332111354314222112331.1.2121.. hla1383 ENRNSEG:A::::::::::::::::::T::T:E::EQFR:E::::::AFL::::L:I::: Hmu3308 ::RLTDTAALAGDGGPQAVEAGTRESVEEI:GEEL:RGLEEI:A::RIV:::M::VA::: HVO_1484 GDTDADS:LLSGLLGGASGVSSGLRGG::R:E:::::::E:F:P:::::S:::::::E:: Hbo0061 :SSDDTD:LFAQLRSSTA::::::::::G::DD:::A::::SI:L:::FL:::::::E:: rrnAC0183 :::::::-::::::::::::::::::::AARDE:LE:MQS:::::F:::::::::::::: VNG1505 :::::::-:::::::::::::::::::-EEA::::::L:A:F:PM::::TF:::I::::: NP0060A :::::::-:::::::::::::::::::-:EA::::::AF::MS::::AM::::::::::: consensus IHSYSQRLEEEAERRRQLAQDVEEDLQEPIDELRASSEEVAERTDDIRDIARDQADRMAD #oth 11..2221243224233.4441343252.343155224312333241543144.223233 hla1383 VD::VTEA:R::R:Q:E:SRR:A:QIG::AAA::ETTA::::ES:R:DEL:GR:S:::D: Hmu3308 ::::::E::QSI:E:E::MT:I:Q::AD::RT::D:A:D::TS::E:S::::E::GTTET HVO_1484 ::::::AAR:A:::::A::HE::A:VSD:VES:LR:::::T::::::ETT::A:::D::T Hbo0061 ::::::EAR:Q:::::::TTQ:QRE:R:::::VHQ::LT:T::AE::::::TE:VED:EA rrnAC0183 :D:::::::SAIDDQQT:M:E::SG::::::::S::A::::QTNKQ:TMT:ET:SES:DE VNG1505 :D::A:::HD:IDS:QE::NA:AS:VEA:LSS:E:T:QD::::::TM:AATD::V::::: NP0060A :::::E:::::V:KCT::Q:::T:EV:A::E::KSVTDRIVDSS:E:ATL:D:::ESARE consensus VAREISEMSATVEEIASTADEVAATSADAAELAEEGEAAADDAIETMEDVDEAAETVSED #oth 123.23421.11..1.1.111.241.43.252.44.331.52.333.5314213351332 hla1383 LS::AN::T:::::V:A:::::::::D:::G::A::VD::S::T::::E:R::T:A:R:E Hmu3308 :G::::NV::::::::::::::::::ER:ER:::D:RT::A::::A::R:Q:SSGD:VS: HVO_1484 ::A:V::L::::::::A::E::ER::::::TR:S:::D:::E::DV:R::S:::::A::: Hbo0061 ::G:::Q:::::::::A::E::EN::LE:::R:SK::T::NE:::V:QE:SQ::TEA::: rrnAC0183 ::G:VAD::::I:::::::E:::S::TS:EQK::R:NE::QQ:ATM:N:::D:VD:::T: VNG1505 :S::::SV::S:::V:::::D:RR::E::EA::QQ::::::::LA::T:I:::TDG:TAG NP0060A ::N:VGSL::::::V:::T:D::TQ::E:D:::T::R:S:EE:::::GS:TD:::S:T:: consensus VARLRERVAEIDEVVDVINDIADQTNLLALNASIEAARAGEAGDGFAVVADEVKSLAEES #oth 244.3222221231323.2.111...2.............1..2..1...2.1.3..231 hla1383 M:D:Q:Q:D::RG:T:::G:V::::::::::::::::::::::S:::::::::::::QDA Hmu3308 :D::E::::::::I::M::::S::::M::::::::::::::::::::::::::::::::: HVO_1484 :QQ:HDQI::::::L:A:::::E:::::::::::::::::D::E::::::S:::N::::: Hbo0061 :R::QTKID:V:::IET:::::E::::::::::::::::::::E::::::E:::::::Q: rrnAC0183 I:G:::QAD:::DI:E::::::::::M:::::::::::::::::::::::::I:T::GD: VNG1505 :EQ::::A:DVES:TG::D:::E:::M::::::::::::::::E::::::::::A::::: NP0060A :ET:HD::GQ:::I::::D:::::::I:::::::::::::::::::G:::::::::::K: consensus QEQASEIEETVEEIQDEAEETVDSLEETTERVDDGIERVEEAMERLEEIVDAVEDASDGI #oth 2321331132.4321222441223.34123425212231332443.22.341.34125.2 hla1383 SDH:AD::D::::VA:SG:A:L:E::RVAD::A::T:Q:D:TVT:::A:ES::V:::::: Hmu3308 RTH::::::M:::::ADT:NA:A:::A:AQD::R::::::S:T:T:Q::::V:AE::R:: HVO_1484 :AR:A:V:G::GD::S::Q::I:::SQ::::LY:::D:G:DV:RS:SD:SA:::Q:TV:V Hbo0061 ::::::V:Q::NSV:S::G:::E::T::::KLHE:::LGG:::SS:S:::E:::RTTE:: rrnAC0183 ::H:NQ::D::T:::::TVDA:E:::TV::Q:TE::DQ::T:A:::::::S::NE::Q:: VNG1505 R::STRV::L::QM:A:T:::::Q:D:VNQ:IGE:V::::::::T:Q::T::::::AS:M NP0060A :::::R:D:M:S::::D:AG::EN:D::NTAI::SVTE:RDVLAA::D:EM:::G::::: consensus AEVSDATDDQAASAEQVAGMVDDLTDRADTVADQLDEIAAANRRQTEQVDEIRETAERL- #oth 3..14.1.3..4.2.21132.12452324532333322111224.3341531322242.1 hla1383 ::::::M:S::T:V:E::A::::S:ES:E:::NSAS::::TTD::R:R::::ADS:AE:: Hmu3308 H::::::::::::::A::::::E:V:Q::Q:::EVEAV::::EE::KTIR::S::::::: HVO_1484 G::AS::::::E::::I::::::A:E::T::S::IG:::D:::S:::::LS::DA::::: Hbo0061 :::A::::N::M:::::T:A:ENTREQ:KN::S:V::V:D:S:E::N:IKA:::SSK::D rrnAC0183 Q:::A::::::::T:E::S:::E:SSGI:DMSA:::DL::T:E::::KIQDVA:::R::: VNG1505 Q:::T:::E::V:T:E::E::::VD:::GEI:AA::D::D:TDQ:VRT:E:V:::VGK:: NP0060A H:::R:M:E::::T::I::V::E:A::SERLT:E::::S::::D:KRS::D:VAAVK::: consensus ----------------------------------------------------------TD #oth 111111222221221222121112222221111221121222222222111211111134 hla1383 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::E Hmu3308 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::GE HVO_1484 :::GGETGDGTGQNTLPETG:::AGNAAAGGVDDPPEGVLGDFDFDEPPSNRLSNDGG:S Hbo0061 MGNGGESASSDGTPTSADTEPPLSSVGTDGGVDEMPESVRQAEGSGDEPSNP::::::S: rrnAC0183 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::DT VNG1505 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::S- NP0060A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus --- #oth 211 hla1383 ::: Hmu3308 ::: HVO_1484 E:: Hbo0061 E:: rrnAC0183 DTA VNG1505 ::: NP0060A D::