|
Pairwise sequence scores | ||||||||
---|---|---|---|---|---|---|---|---|
Consensus score | 2065 | VNG0627 | Hmu0747 | rrnB0257 | NP4244A | Hbo0102 | HVO_1452 | hla2513 |
1562 | VNG0627 | 2257 | 1174 | 1253 | 1230 | 1215 | 1214 | 1228 |
1415 | Hmu0747 | 1174 | 2027 | 1222 | 1196 | 1014 | 1162 | 1129 |
1493 | rrnB0257 | 1253 | 1222 | 2140 | 1383 | 1141 | 1163 | 1148 |
1453 | NP4244A | 1230 | 1196 | 1383 | 2034 | 1076 | 1154 | 1155 |
1443 | Hbo0102 | 1215 | 1014 | 1141 | 1076 | 2437 | 1271 | 1334 |
1508 | HVO_1452 | 1214 | 1162 | 1163 | 1154 | 1271 | 2070 | 1284 |
1567 | hla2513 | 1228 | 1129 | 1148 | 1155 | 1334 | 1284 | 3306 |
446 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 VNG0627 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu0747 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnB0257 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP4244A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0102 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1452 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla2513 MDRISVEHRIRMLYRVVREVRDDGTVGRLGDGHADRERHGVEPVNQPLAELRLLGEVGVE consensus -------------------------------GR---------G----------------- #oth 111111111111111111111112222212322443334444234443223333122222 VNG0627 :::::::::::::::::::::::::::::MP::WTPPVKVAPETYKMGAAVVVH:::::: Hmu0747 :::::::::::::::::::::::::::::::--:::::::::-::::::::::::::::: rrnB0257 :::::::::::::::::::::::::::::MA::LSPTILLLG:ERTA::::::::::::: NP4244A :::::::::::::::::::::::::::::::--:::::::::-::::::::::::::::: Hbo0102 :::::::::::::::::::::::MCRLSRLS:KTVTVLGRPE:RCRIEGASELVVYFQTA HVO_1452 :::::::::::::::::::::::::::::::--:::::::::-::::::::::::::::: hla2513 VERLLVHRHVAEALVVGLAYRPSLRVFDRLAN:ELLVVASGH:TTVSRGRQIATVPPIKR consensus ----------------------------MARRSVLFSPGDRPELMRKAPGAGADVVVFDL #oth 2222221111111111111111111111.3...1..1...31221...1432...31... VNG0627 :::::::::::::::::::::::::::::T::::::::::Q:S::::::TT::::::::: Hmu0747 ::::::::::::::::::::::::::::::::::::A:::Q:DKL:::ADS::::A:::: rrnB0257 :::::::::::::::::::::::::::::V::::::A:::NA::::::A:GD:::::::: NP4244A ::::::::::::::::::::::::::::::::::::A:::S::I::::AASS:::::::: Hbo0102 APSGVG:::::::::::::::::::::::::::L:::::::::::::::S:::::LC::: HVO_1452 :::::::::::::::::::::::::::::P::::::::::::::L::::::::::L:::: hla2513 HARRCASLLPLGRRRRRDDYVGGDGPPD:::::L:::::::::::::::::::::IC::: consensus EDAVAPARKAEAREAVRDVLADPDFDPDAEVCVRVNPVGSGAADDLDAVLSAG------- #oth ....2.32.43..22.321.223423223132..2223233332.232332441111111 VNG0627 :::::::::GD::R::S:L:TAA:::::C:::::::::::::G::V:::::G:::::::: Hmu0747 ::::V:D::QA::::::::::TV--ESTC:L::::::IDD:::R::SV:::G:::::::: rrnB0257 :::::::D:EQ:::S:QS::SAV--NSNSHI:::I::::VS:TA::GGI::DT::::::: NP4244A ::::::GD:::::R::A:::::LGDGN:I:H::::::::::::R:VA:AFAHA::::::: Hbo0102 ::::V:SK:DD::A::::::S::S::::::IL:::ASE--TV:::::G::GPD::::::: HVO_1452 ::::S:D:::::::::AS::S::E:::::::A:::::-:DAGR::IA::CA:H::::::: hla2513 ::::::G:::::::H::A::::::::::::::::LTA--::P:A::::LIG::TGDEDGP consensus ----GP-----DSVMLPKAESADDVATVAGLLAERDADLPVLALVESAAGVLNAEEIAAA #oth 11114211211.22121.1432321651343223322351.2.11.1.1.1.3.421..2 VNG0627 :::::F::::::::VV::VTD:::::::DS::::H::TS:::::::::::::::H::::: Hmu0747 ::::E::::::::::A::VPD:NA:E:L::M::::::SG:::::::::::::H::::::V rrnB0257 ::::S::::::::::::::S::E:ISALER::G:YN::::::::::::::::::A::::: NP4244A ::::A:::::::::::::::GS:::LRLRE::RGV::AQ:::::::::::::::D::::: Hbo0102 :::::DVDVRL:GI:VS::GY:A:IRE:DNE::A:GWT:::F::I:T:R:::::PD:::E HVO_1452 ::::P::::::::LVV:::T:::::TS:::AAR:VG::C::I:I::::::::A:P:V::: hla2513 DDAE::::IRL:A:::::V::PER:DK::S:C:D:GL:PA:F::::T:::I:S::S:::: consensus DATDALLFGAEDLAADIGATRTDEGTEVLYARERVVLAASAAGVDAIDTVYTDFEDEAGL #oth 32.3112.....121.2..1.123.1..11..111121.3.121.....312223.4311 VNG0627 GP::::V::::::S::::::::::::::::::::::::::::::::::::H:AI::PSAV Hmu0747 ::::::::::::::G:L:::::ES:R::AH::QHAL:::R:::::::::H:PAY:::::: rrnB0257 :P::::::::::::::L::S::SD:R::::::Q:::V::::::I:::::I:PEYG:LD:: NP4244A A::::::::::::T:::::::::A::::::::Q:A:T:::::::::::::::::G:TE:: Hbo0102 GP:T::I:::::::::::::::E:::::::::::::VV:A:EEI::::::H::::::S:: HVO_1452 PD:A:VV:::::F:::V::::SE:::::::::::::V::A:::::::::LHV:YR::::: hla2513 P::NV:V:::::::::V::::::::::::::::H:::::G::DI::::::::::S:AD:: consensus REAAEFAARLGYDGKMAIHPAQVPVINDAFTPDDEDIAWAERVLDARDEADA--RGVFEV #oth 1231321241.1...11...1..311.2.11.233421..32124.332223422...3. VNG0627 AAD:R:::D::F:::L:::::::DP::::Y::TEA:T:::T:::::AADS::::-:::R: Hmu0747 ::::TE:R::::::::V::::::::V:A:::::::A::::R:IVE:SEA::ERA::::V: rrnB0257 :D:T::::Q:::::::::::D::A::::::::S::E::::::IIA:DE:T::::-::::: NP4244A :A:T:T::QF::::::::::D::A:::E:::::GS::E:::::VT:DK:T::::-::::: Hbo0102 ::QT:::RS:::::::::::::::::::::::SPDQVE:::K::::::::ETSGA:::R: HVO_1452 ::D:A:GR:::::::L:::::::::::E::S:::::V:::KK::R:::::AREG::::G: hla2513 ::E:A::LT::::::L:::::::EP::A:::::P:KVE:::T::::::A::RDA:::::: consensus DGEMIDAPLIAQAERILERAREAD-- #oth .1......1131..1124..312451 VNG0627 ::::::::::::::::MR:::A::N: Hmu0747 ::::::::QVR::::::A::E:--:: rrnB0257 :::::::::::::::V:::::::GQR NP4244A :::::::::VTR:::::Q::E::GVR Hbo0102 :D::::::::::::::::::GASADR HVO_1452 :::::::::VK:::N::D::G:SY:: hla2513 ::::::::::::::::V:::AAS:R: