| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||
|---|---|---|---|---|---|---|---|---|
| Consensus score | 5621 | NP3690A | VNG1156 | hla0954 | HVO_2736 | Hbo2470 | rrnAC0101 | Hmu1241 |
| 3528 | NP3690A | 5691 | 2861 | 2886 | 2918 | 2909 | 2779 | 2869 |
| 3770 | VNG1156 | 2861 | 5815 | 2871 | 3091 | 3147 | 2918 | 3044 |
| 3902 | hla0954 | 2886 | 2871 | 5985 | 3311 | 3321 | 2955 | 2998 |
| 4178 | HVO_2736 | 2918 | 3091 | 3311 | 5674 | 3622 | 3019 | 3156 |
| 4064 | Hbo2470 | 2909 | 3147 | 3321 | 3622 | 5723 | 3127 | 3076 |
| 3922 | rrnAC0101 | 2779 | 2918 | 2955 | 3019 | 3127 | 5901 | 3543 |
| 3953 | Hmu1241 | 2869 | 3044 | 2998 | 3156 | 3076 | 3543 | 5647 |
829 symbols consensus ----------------------------MVAALARALRAEARAANERRLLVLAGDRDAGI #oth 111222122222222222223333334545433.142341.42211..2..11.212213 NP3690A ::::::::::::::::::::::::::MDT:RET::G:CS::S:T::::::::::G::::Y VNG1156 :::MPGGRATAAQPRTKRPLAWSPNRRR:HLSS::::L:::ER:::::M:::::::A::V hla0954 :::::::::::::::::::::::::::::I:::::DAKR::E::::::V::F:::::S:: HVO_2736 ::::::::::::::::::::MTELGDDPD:E:::A:R:E::L:T:Q:::::::::::::: Hbo2470 :::::::::::::::::::::::::::MNL::::AD::TA::DT:Q:::::::::::::: rrnAC0101 MPTTVSGPIKSVPGERRDRQVHTGASATTGMDI::S::::::R::::::::::::P:RTR Hmu1241 ::::::::::::::::::::::::::::--ME::AR:::::QRVD:::V:::T:TPP:TR consensus DAAADALDAADVPDDETTFVGAREGLRFEHVRPKRADELLGTTRTAVVLDAHEECRPNAL #oth 23.3222232312442214.333242422324233143...1.143..3.2.14221111 NP3690A RG::A:VE::GIDRT:VAA:SEQ:LPVGAG:A:::T::::::::AC::F:C:DS:::::: VNG1156 RT:DTL::DLPI:LS:::L:ATQDA:AC:::PTRN::R:::::QR:::I:L::D:::::: hla0954 :::Y::IE:--:DPTS:AI:ST:::F:::EH::RST:::::R::EV::::C::QFV:::: HVO_2736 :::F::VRG:::::::V:::T::::F::HR:E::::SS:::::::L::::::::FSA::: Hbo2470 :::F:V::G:::::::VA::T::::F:::R::::H:RT:::::::V::C:::::FS::V: rrnAC0101 ER::T:::L::::SA:::V::PEPF:DC::HDQS::E::::R::::::F:::::L::D:V Hmu1241 :::D::::::G:SSEAL:V::PADR:PG::LDTVH:G::::R::S:::::C::A:::::: consensus GRAVGAVDGGGLLVLLAPPLDDWPDRRDSFDESLAVPPFSVADVTGRFRTRLVETLRAHP #oth .141.1......211.1.3.34..33213.233.....33321.311..3.113.1.3.1 NP3690A ::::::::::::::V:T:::SS::::V:G:ETT:::::::E:N:GD:::::::::::S:R VNG1156 ::V:::::::::::V:::::AE::T:DGA:AAG::::::DA::::::::R::AD:M:::: hla0954 ::S:::::::::::::T:G::A::AI::R::D::::::YGIE:::::::E:F:G:::S:: HVO_2736 ::VA::::::::::::T:S:::::T:::::::R::::::::::::::::G:::S:::D:: Hbo2470 ::LA:V::::::F::::::::E::ETDG::E:::::::V::S::G::::::::::::T:: rrnAC0101 ::T:::::::::Y:::::::ET::EE::G::A:::::::G:E::S:H::R:F:::::::R Hmu1241 :A:::::::::::LV:::A:::::::::::::R:::::AT:E::A:H::::::::::::: consensus GIAIVDLDSG-----TVERDGL------------TDPAPRRPDPPPRPPTDAD--FPRAA #oth .1.21221211111132232.311111111111123232341445153234341131321 NP3690A ::::::V::D:::::RLLK::R:::::::::::::N::::L:T:NE:HS:GDV::::D:: VNG1156 ::::Y:V:TD::::::LSD::R:::::::::::::R::::L:::D:D:QPT::::V:A:: hla0954 :::V:S:GT:PDGNDAI:::::VGSRGDAAAEPTVQATAEK:TT::NA:PN:T::::A:: HVO_2736 :V:L:::::::::::::::::A::::::::::::YRQGISFDAA:::V::EK:RRS::R: Hbo2470 :V:V:N::TD:::::::::N:S::::::::::::V:AP:G:D:HT:S::HGHT::Y:::: rrnAC0101 ::::::V:R:::::::::Q::::::::::::::::::P:S::V:S:T:::::W:::RSET Hmu1241 :::V::A::::::::MI::S::::::::::::::::::::V:RGR:A::D:HG::::::: consensus YDACLTDDQRAALAAFEALRTPGEAVVVEADRGRGKSSAAGLAAGALAADGRDVLVTAPQ #oth 122.2.3..331132213.452.4.1.21.........1..1..13..2315..11.1.3 NP3690A :E::R:S:::D::Q:C:R::KK:A:::L::::::::::::::::A::::::G:::I:::: VNG1156 I:::V:P::A::::S:A:::D::H:::AD:::::::::V:::::AC:::E:H:::::::R hla0954 :E:::::::VR:VR:::S:A:::H:::A:::::::::::::I::::::LS:A:::::::A HVO_2736 :ED:::A::SE::::L:::TE::T:::::::::::::::::::::S:::E:K::V::::G Hbo2470 ::::::A::SRT:::L:R::NA:::::::::::::::::::::::S:::::::::::::A rrnAC0101 :AQ:::::::D:VQ:::S:Q:A:::::::::::::::::::::::N:::AD::::::G:: Hmu1241 :::::::::V::VGG::P:SR::N:L::::::::::::::::::::::R::L:::::::: consensus YRNAAEVFARAAELLEELGALAEDDDGD-----------HRLDAAGGGRVRFADPAEAAD #oth 31112.2.2..431144413234323541111111123345252342.11.144.33.12 NP3690A ::::::G:D::::::DT:::::D:ARDG::::::::DRSPA:L:DS::::::LS::D::: VNG1156 R::TT:L::::GA::AD:::::S:G:--:::::::::::-TVET:A:::I::SK:PA::: hla0954 F::::::::::S::I:GSESDG::G:::GGNERNSEGDT::I::P:::::::LA:::::: HVO_2736 E::::::::::ER::S:::::RGGGA:::::::::::::FDIA:DR:::::YVP:T::G: Hbo2470 :G::R::::::I:::R:T:TFGSH:EEA::::::::::::VVS:R::::I::T::PT::T rrnAC0101 ::S:::::V:::H:::AF:VDFTR:RSS:::::::::DPQ:::V::A:C::Y:P:D:::S Hmu1241 ::S:R:::D::G:V:STM:::R:R::P::::::::::TP:E:RT:D-::::Y:::TA::T consensus APDDPDAVIVDEAAALPVRLLESFLD-APAVAFATTVHGYEGAGRGFSVRFRDRLADSDL #oth 23331.2131....12..13.14112111223.3...1.........31..121.32234 NP3690A :S--A::L::::::S:::GT:::L:GV::SAC:::::R:::::::::D::::ET:TETHE VNG1156 L:G:::::FA:::::I:::::::L:::CQRL::T:::::::::::::D:::::::::ATQ hla0954 L:::::::::::::::::::::G::::::::::C:::::::::::::AI::KE::RA:PF HVO_2736 :AA:A::LV:::::::::G::::::A:::::::C:::R:::::::::T:::::::D:A:R Hbo2470 R:::::VLL::::::V:::::AA:A::::SAG:F::::::::::::::::::::::E::: rrnAC0101 L::G::V::::::::::::R::Q::::::::T::::::::::::::::::::::::E::: Hmu1241 :T:EA:L::::::::::::V::R::::::S:::T::::::::::::::::::S::::::F consensus AVTDVRLDEPIRYARGDPVESWAFRALLLDARPAVDQLVADATPETAAYRALSADDLLAD #oth 313233122....144..1.4.21.1...1.1.1.2221212233323.2213323.12. NP3690A TT:Q:-:S::::::P:::::V:L::::::::S:P::P::E:VSTAET:::R:D::T:AD: VNG1156 T:HETS:TD:::::GT::I:P::::::::G:::::EP:::::::D::::V:::GA::A:: hla0954 ::R::::::::::::N::::A::S::::::::::::EA::GSAVGD:T::R:TP:E:::: HVO_2736 E:::A:::D:::::A:::::::T::::::::::P::::::::::::VS:::::P:::::: Hbo2470 S::::QM::::::::S::::T::::T:::::::::SP::T::A::STE:::::::E:AS: rrnAC0101 :::::SMTT::::SDA::::V::::::::::::P::::IE::::::VE::Q:::A::::: Hmu1241 E:CERQ:T::::::P::::::::::::::G:::::::V:::::ADS:::ERCGSRR::D: consensus EHLLREAFGLLVLAHYRTEPNDLARLLDAPNLTARALTHDGHVVSVALLAREGGLDADTR #oth 12....1.....3.......2..........234...211.1.11.....1..2.42331 NP3690A :R::::::::::Y::::::::::::::::::IA::::VA::::::::::::::::ND:IA VNG1156 ::::::::::::S::::::::::::::::::::M:::VA::::A:::::::::::AD:R: hla0954 :A::::::::::A:::::::::::::::::::A::::VAE:R::A::::::::R:::E:: HVO_2736 ::::::::::::::::::::D::::::::::::L:::::E:R::::::::::::::P::: Hbo2470 ::::::V:::::::::::::D:::::::::::EC:::M:::::::::::::::::::E:: rrnAC0101 T:::::V:::::::::::::S::::::::::::V:::::E::::A:::::Q::::S:S:: Hmu1241 ::::::V:::::::::::::D::::::::::VGV:::::::::::::::::::D:P:TL: consensus AAMYEGGRVRGNMLPDVLTSQLRDEAAAVPVGYRVLRIATHHAVRSRGLGSRLLSEIRA- #oth 261.1.3.11..12...121....13.2412.3.12.....2.2.12.1.11..3.2321 NP3690A VDV:::S:I:::LV::::A:::::PD:CG:::V:T::::::::A:::::::::::::E:E VNG1156 ::::D:Q::K:::I::::::::::::::TT:::::::::::P::::::::::::G:L::: hla0954 RR::::E::::::V:::::::::::T::E:C:L:TV:::::::L:GE:F:T:::D:VHEE HVO_2736 RQ::D:::I::::::::F:::::::G:G:::::::M::::::::::S:::::::T:L:D: Hbo2470 RS::::E::::::::::F:::::::D::A:I::::M::::::::::S::::::::::H:E rrnAC0101 :T::::::::::::::::ST:::::::G::::Q::::::::A:::::::::K:::::::: Hmu1241 :E:::::::::::I:::::T:::::::G::::Q::::::::P::::::::::::D::DD: consensus ---------EFA---DDVDYLGVGYGATPELLSFWADNGYRTVHLSTTRNDTSGEYSAIM #oth 332322222223111341.121.11.1..3.12..3221.31..21.11.22...2.12. NP3690A LNERPRLSSAWP:::PG::::S:S::V::P::D::SA:D::P::::::Q::::::R:VL: VNG1156 :::::::::::N:::GHA:W:::::::::A::::::A:::S::::::::::::::::::: hla0954 FGEGGGRGTDGDCDG:T:::FS:::::::R::R::RRA:::::::::S:::A:::H:::: HVO_2736 :::::::::::::::::A::::::F::::::::::R::::G:::::::::::::::::L: Hbo2470 KEAKG::::DGN:::A:::::::::::::::::::D::::S:::F:::::E:::::::L: rrnAC0101 ::::::::::::::::H::WV::S:::::::VR:::::::N::::A:S::A::::::VV: Hmu1241 ::::::::::::::::A::W:::::::::::VD::::S::::::C::::::R:::::::: consensus LRPLSEA--GAALADRHAGWFRDRIGDVLSDPLSDLDPDVVRAALRACDGSP--PVDLSE #oth 221223211133.41..252.42.4442.2.1121311.1112112.3333411233.12 NP3690A V:::::T::::Q:T:::ERQ:YA:LPPA:T::::TAT::I::GV:S:I:::VAD::S:TA VNG1156 :DA::D::::R::H:::::::A::::G::::A:R:::A::A:G:::::ATT:::SLA::: hla0954 :::TG:DGP:SR:L::::AA::::ER:G:::AHR:V:::::AG:::::PA:M:::I::T: HVO_2736 T::::S::::RD:R::::N::LG:V::::G:A:::::A::A::::A:V:SFL::SP:::: Hbo2470 :N::T:::::QR:H:::::::L::MPG::::::::A::::::::I::::A::::::E:TD rrnAC0101 :D:C:DD::A::::A::RE::Q:::AA::::::D:C:::::::V:::T::ER::::S::: Hmu1241 :::C:T::::::::::::S::::::TS::::::D::::::A:TV:::VE:T:::EI:::: consensus REWRLVAGASGGPGMYDTAPGPFRRLALAHLVAGADAS-----LSPREERLLVRKVLQAH #oth 511.4.11224.2122223.411.2.2321.442253511111132321..1.212..22 NP3690A S:::H::S:AS:::L::VS::::::::VRA::D::VDN:::::--TAA:::::S:::::: VNG1156 :D::T::::AH:::::SVD:R::::::VH:::::DADL::::::::D:Q::::GAL:::R hla0954 I:::S:V:::Y::::::S:::A::D::::A:IE:D:G:ETGDA:DD::::::::::::GR HVO_2736 Y:::V:V:::Y:::L:T::::A::::G::::TNPER::::::::T::::::V::::::T: Hbo2470 ::::V:V:::F:::::T:::DA::T::HRA:NDNDSPC:::::-::EA::::::::::GN rrnAC0101 W:::::::VP::ASVL::N:K:::D:TRR::SHP:::T::::A::::::::::::::::: Hmu1241 P:R:::::IP::S:VF::::E:V::::::::::P:EPD::::A:TDDQ:::::::A::G: consensus PWDGVADELGYVSTAECMRALGDAYEPLVERYGTD--AAREERERFR-- #oth 2.341112.211.2241.11..22323.1341.23112242.23.2432 NP3690A S::::::R::::::R:::::::::::::::Q::::::::T::L::Y::: VNG1156 ::::L::D:::H:ASQA:::::::LQA::AAH::A:::::A:VA::TED hla0954 ::ES:::::::::::A::::::::::::::::::E::F:L::::::ISD HVO_2736 :::A:::::DFH:::GA::::::::::::DE:::::::::::::::::: Hbo2470 ::AT:::::D:H::RNA:K:::::SVS::::::S:VA:VET::Q::EQT rrnAC0101 ::ST:TE::AF::ER::::T::GIV:R:TRL::DP::WVQ::LD:HL:: Hmu1241 G::R:::::AF:::::::::::RTV:R::RL::D::::LT::LD:HT::