| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||
|---|---|---|---|---|---|---|---|---|
| Consensus score | 4329 | NP2962A | Hmu3314 | hla0866 | HVO_0945 | Hbo2896 | VNG2193 | rrnAC1154 |
| 3292 | NP2962A | 4437 | 2715 | 2975 | 3007 | 3010 | 2359 | 2749 |
| 3278 | Hmu3314 | 2715 | 4483 | 2712 | 2917 | 2914 | 2518 | 3052 |
| 3282 | hla0866 | 2975 | 2712 | 4575 | 3064 | 3141 | 2366 | 2739 |
| 3637 | HVO_0945 | 3007 | 2917 | 3064 | 4518 | 3625 | 2467 | 2930 |
| 3696 | Hbo2896 | 3010 | 2914 | 3141 | 3625 | 4407 | 2518 | 2971 |
| 2849 | VNG2193 | 2359 | 2518 | 2366 | 2467 | 2518 | 3577 | 2631 |
| 3342 | rrnAC1154 | 2749 | 3052 | 2739 | 2930 | 2971 | 2631 | 4317 |
626 symbols consensus ----------------------MATFVDQFPDEARIVRAAFLVAFAALGIGAFFGIIQAL #oth 111111111111111233223246422242143233333425321521431152122141 NP2962A :::::::::::::::::::::::S:YIE:::E::::::L::FSS::::AV::AL:LV:V: Hmu3314 MAHAHDDPTSESRAQSELTAGNRVA::::Y:TA::VT:LC:G:S:T::L:::VL::V::: hla0866 :::::::::::::::MSEAIEGDR::::K::E::::::::L:SS:F::TL::I:::::T: HVO_0945 ::::::::::::::::MATASGGDE:::K:::::A:IK:S::I::VS::::::::L:::: Hbo2896 ::::::::::::::::::::::::::::RY::::KV:Q:SLA:::I:::::::::L:::: VNG2193 ::::::::::::::::::::::-------------------------------------- rrnAC1154 ::::::::::::::::::::::-MV:::SY:KTSKL::SE:I::::::::::L:::::S: consensus HRTNVFR-IISSADYYTVLTGHGVLLALVFTIFFLVGLFTWAVARSLDRPLPNIRFTWAW #oth 111323113121321123113111212241121124131312233112142544333342 NP2962A :::DIV::F:D::K::D:::L:::::VIT::::::::I::::ITT::::S:G:::::Q:: Hmu3314 :::::::GV:::V:::::::::::::::F::::::S:V:S:G:::::::D:LSR::SLF: hla0866 :::D:::G::::T::::S::A:::F:::S::T:::::::::::V:::::::I:TKI::T: HVO_0945 ::::::::V:D::::::::::::::::I:::::::C:V:H::::::::::AESAL:S::: Hbo2896 ::::II::::::V::::::::::::::::::::::::::::::T:::E::::D::L:::: VNG2193 -------:---------------------------------------------------- rrnAC1154 :::G:::GF::::::::I:::::::::::::T::IA::::::::N::E:E::H-:IA:SA consensus FGLMLVGATLAAVAILGGFVPE-----IPM-SADVLFTFYAPLQAHPAFYIGLALFIVGT #oth 322131.2132223122.13241111133212.2..1...1.11...3..3.1.4311.1 NP2962A Y:::V::TV:::LPMI::LIDS:::::VE::::G::::::::M::::L::L:::I::::: Hmu3314 :::Q:::::AV:L::F::::G::::::::F:E::::Y::::::::::L::A:::AWL::: hla0866 Y:::A::M:MTGIS::A:::DS::::::D::::::::::::::::::M::A:::V::::S HVO_0945 V:::TT::V::T:::::::::N:::::LG::::::::::::::::::I::::::M::::: Hbo2896 ::::TT:::IT::T::A:LF:D::::::::::::::Y:::::::::::::::::M::I:: VNG2193 ---:V::T::::IT::N::A:::::::L:FG::N::Y:::P:::::::::V:A::L:::S rrnAC1154 :WI::T:TV::::S:I::L:GAPSILGHDL:K::::::::::MK::::::::A::I:::S consensus WLAGADWFLTYRAWRRENPDERIPLQTFMVLTTMIMWYISTLGVAVSVVAFLIPWSLGLI #oth .31.212133233.131111.....1....11.231..21131..11.14..1.1.2.21 NP2962A ::::V:::T:WWS:KQD::G:::::P:::::::::F::L:S::::A::LL::L:::V:I: Hmu3314 :::::::IRL:VH:::D:GG:::::::::::::TL::::A:I::::E:LV::L:L::::: hla0866 :I::::F:R:WL::K:::::::::::::::::::A::::ASSA::A::LI::L::::::: HVO_0945 :::::::::S:::::Q:H:::::::::::::::::::::::::::::::F:::::::::: Hbo2896 :M:::::::A::E::S:::::::::::::::::::::::::::::::::F::::::M::V VNG2193 :IV:::Y::::::::AD::::::::::::::A:FV:::L:SA::::E:::::::::M:W: rrnAC1154 :V::LAY:KALWE::S:::G::::::::::V:::L:::V::I::::E::::::::::::: consensus DQVNPLLTRTLFWYFGHPVVYFWLMPAYLAWYTILPKLAGGRLFSDPLARVVFVLFLLLS #oth 321111.......1...11.....1...23..12...11..1............1.12.. NP2962A ::::A::::::::::::A::::::::::MM::IM:::IS::K:::::::::::::::V:: Hmu3314 :S:D::::::::::::::::::::::::F::::::::::::::::::::::::::::I:: hla0866 :::::T:::::::F:::::::::::::::L:::V:::I:::::::::::::::::::::: HVO_0945 ES::::::::::::::::I::::::::::L:::V:::::::::::::::::::::::::: Hbo2896 :S:::::::::::::::::::::::::::M:::V::::S::::::::::::::::::::: VNG2193 S::D::::::::::::::::::::L::::::::::::::::K::::::::::::::V::: rrnAC1154 QNID:::::::::::::::::::::::::V::::::::::::::::::::::::A::::: consensus TPVGIHHQYLDPGIAEGFKFIAMTNTMFLLLPSLLTAFTVVASVEHGARQRGGEGYLGWL #oth ..1.1....2....11.1..21.1..11.....1.....1...3.1......13.122.1 NP2962A ::T:::::::::::::::::M::V:::::::::::::::::::M:::::::::S::F::: Hmu3314 ::::F::::A::::::::::V::::::::::::F:::::A:::I:Y:::::::K:::R:M hla0866 :::::::::::::::::::::S:::::::::::::::::::::::Y:::::::T:L:::: HVO_0945 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::R:: Hbo2896 :::::::::::::::::::::::::::::::::::::::::::M:::::::::::::::: VNG2193 ::::F::::T::::::::::::::::FM:::::::::::::::L:::::::::S::I::: rrnAC1154 ::::F::::T::::PS:Y::::::::::::::::::::::::::::::::::AK:::S:: consensus RALPWRDPAFTGMALAGLMFAAGGFSGMINAGMNINYLIHNTIWVPGHFHLTVGTAVALT #oth 23...22.3.2111...11...11...11.......111...2..1....1.....2... NP2962A ::::::::V:::::::::::::AA::::V:::::::::V:::W::V:::::::::::::: Hmu3314 T::::SN:::A:C::::::::::::::IV:::::::S:::::L:::::::::::::S::: hla0866 TD::::K:E::::M::::::::::::::V::::::::M:::::::::::::::::::::: HVO_0945 G::::::::::::::::A::::::::::::::::::::::::L::::::::::::::::: Hbo2896 GT::::::::::::::::::::::::::::::::::::::::::::::::M::::::::: VNG2193 :::::GK:S:SA::::::V:::::::::::::::::::::::::::::::::::::F::: rrnAC1154 :N:::GK:::A:CM::::::::::::::::::::::::::::::::::::::::::F::: consensus MMAGSYWLVPQITGKKLQSRGIALLQVVVWFVGMALMSNAMHRAGLAGIPRRTAEPQYRN #oth 3.132..23..1.112224232133.132.11..22......13.11.4.....1.3143 NP2962A I::V:::FL::V:::::WGKSV::A:::L:::::TF:::::::S::::M::::::::::: Hmu3314 :::I::::Y::V:::R::FY:L:QI:PY:::I::::::::::::::::V:::::::::QQ hla0866 F::AT::IW::::N:PIY::S:G:F:::L::I::::::::::AQ:IL:A:::::::E:SG HVO_0945 :::::::::::V::R::Y::P:G::::IM:::::VF::::::::::::::::::::::Q: Hbo2896 ::::T:::L:::::::VY::P:G:::::M:::::VF:::::::G::L:::::::::::T: VNG2193 ::GVA::::::::::R::H:TL:AI:PF::VI::T::::::::G::::L:::::K:LF:G rrnAC1154 A::I::::::::::::::L::L:S::PY:::::::V::::::::::::::::::::T:DE consensus ---FDFETVAGSIGELRLQIAIGGTLLFVSAVLFLFVMVGTWLGRRG--GRLPVNEYLPE #oth 1111414433.235.223.112.13..121321.251324.4233323124332232213 NP2962A ::::E::MA:::L:::NA:VIL::I:::::TL::VL:V:M:V::DKAEP:T::A:::-AD Hmu3314 ::::S::A:F::VP:M:::::A:AL::TIG:L::VT:::::::AE::R::::R:DSH::: hla0866 :::::YP:MF:GFE::NI::::::::::::T:::IGNL:L:-M:NP-::KVSGLA:S::P HVO_0945 ::::E:L:PI:::F:::V:::L::::::L:V:::::NILL:S::EE-::SDR::DS:::: Hbo2896 ::::::V:AI:::W:I:V:::L::::::I:V:::::NVAA::ADD:-::SET::DD:::: VNG2193 EGAAP:DP:V:T:S:MQ:::::::::::::LA:::A:::::::S:P:M::::S::GSI:S rrnAC1154 ::::A::G:::TV::M::::::::F::::G:AM::I::AD:L:A::::::T:S::GHI:: consensus PLSGPDDSPRILDNLKLWTAIAVVLVILAYGLPLASIIAD-GGLFGPGSPPFPV------ #oth 21.12321.31...232.221.23.121..22.112124212.312123233.2323443 NP2962A T::::E:::KV::::::::::::I::::::A:::::::SR:::V::::VGTY:MVVETLQ Hmu3314 :I::VS::::V:::M:::VVV:::::AI:::F:IY:ML:::-:A:N:AA::V:::::::: hla0866 A::::::A:QV::::R::FG::LT::V:::A::::A::NR::::L:::VGTY::WLVPAL HVO_0945 :::::EG::::::::TM::G::A:::V:::T::::G::QNG:::::-:GL:V:ATVSAGV Hbo2896 :::DASG::V:::::A:::G::::::::::T:::::::G::A:I::-S::V::A::SISL VNG2193 A::::A::::::::::V::::::::::I::::::YGML:::-:VLA::::G::::::::: rrnAC1154 ::::A:H:::::::Y:::::::LL:IVI:::P::::MV:::-:::A:::::I:::::::: consensus D----A-T------------------ #oth 23342232434233322221111111 NP2962A VIAQT:ADTVVGVTH::::::::::: Hmu3314 -::::-:-:::::::::::::::::: hla0866 :ALAN:V:PLLGAIGDASTSLVEVVR HVO_0945 :LVLTTV:SAFNTLWGVVA::::::: Hbo2896 :AVVN:I:GVIN:::::::::::::: VNG2193 -::::-:-:::::::::::::::::: rrnAC1154 -::::-:-::::::::::::::::::