| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||
|---|---|---|---|---|---|---|---|---|
| Consensus score | 2882 | VNG1092 | NP1590A | rrnAC1285 | Hmu1690 | hla0273 | HVO_1129 | Hbo0431 |
| 1917 | VNG1092 | 2951 | 1578 | 1493 | 1560 | 1532 | 1595 | 1581 |
| 2085 | NP1590A | 1578 | 2914 | 1764 | 1886 | 1593 | 1685 | 1839 |
| 2061 | rrnAC1285 | 1493 | 1764 | 2843 | 1990 | 1689 | 1748 | 1725 |
| 2166 | Hmu1690 | 1560 | 1886 | 1990 | 2861 | 1696 | 1743 | 1689 |
| 2145 | hla0273 | 1532 | 1593 | 1689 | 1696 | 3150 | 1861 | 1795 |
| 2190 | HVO_1129 | 1595 | 1685 | 1748 | 1743 | 1861 | 3100 | 1865 |
| 2188 | Hbo0431 | 1581 | 1839 | 1725 | 1689 | 1795 | 1865 | 2957 |
435 symbols consensus ----------------------MRDAHLDALVDAAA--DGIDFDGLSVAR-----DDDGY #oth 11111111111111111222213635232.11432413122321.241231111142332 VNG1092 ::::::::::::::::::::::--MSVA:::::::G:A::::::::T::A:::::G:::: NP1590A :::::::::::::::::MRVTDVN:DQ:A:::A::D::::V:C:::V:E::::::TEA:: rrnAC1285 :::::::::::::::::::::::D:T:VE:FAE::S:::::A:::IEA:V:::::EGGR: Hmu1690 :::::::::::::::::::::::QG:::::::TT:::::::A::::A:EP:::::::R:: hla0273 MSDATAVAADEPEVPDIDLPSDAF::V::::A:REP:G:SLH:E:F::::GAGSDR::ES HVO_1129 ::::::::::::::::::::::-MGH:R::::::::TG::VSL:::T::P::::DG:G:F Hbo0431 :::::::::::::::::::VTDV:EEQ:::::RHVD:EQP::::::::S:::::::G:S: consensus AFETPD--------TQEGLSEADLREAADDYPAYVTNWYFWEAVVGDRGP-RRAFLRWLE #oth 4322235111111144442133212341325442211..2134532355441311..12. VNG1092 Q:R::::::::::::DAV:TA:::::H::S--P::::::Y::HDI:GHDTP::::::::: NP1590A R::::GT::::::::H:E::::AF:DV:AEN:WF:S:::Y:R:R--::PESEVS:::::: rrnAC1285 :V::TA::::::::EA:ST:I:::DGL:AS::E:IS:::::H:KAPQAE:::W:Y::::: Hmu1690 VV:VDGD:::::::SHTVETDD:::RV:TE:::::S:::::H:SAPQKAD::W:::::I: hla0273 DEDA::EYVLANGDR:T::::R::H::L::RA:A::D::AF:R:::EF:::::::::::: HVO_1129 RL::::A::::::::LS::T:DG::::L::CDD:A::::::SE:::ESS:Q:::::::V: Hbo0431 :::::EV:::::::A:DA:::SG::DI:V:AEP::::::Y::VE:::::RH:H::::K:: consensus G-----------------------ADDRSVPERYDAL-ADGVTREWGELRITATLDD-AG #oth 41111111111111111111111111432112..231122.3434..1.51122322141 VNG1092 ::::::::::::::::::::::::G:::P:::::::::DS:H::H::::AV:V:HG:A:: NP1590A S:::::::::::::::::::::::::::::::::EGFA:::LNAS::Q:H:DIG:G::D: rrnAC1285 N::::::::::::::::::::::::ESTPI:D:::Q::RE:L:TT::::S::V:::E:DD Hmu1690 :::::::::::::::::::::::::EE:T::::::::::E:::QT::Q:::::RI:::-: hla0273 D:::::::::::::::::::::::::GAT:AT::A:::DE:IE:A::::K::::VT::R: HVO_1129 :AVVDAGGDGDGDGVGGDNDADAD::AA::::::::::R:::S::::Q:LV:V:V:::H: Hbo0431 A:::::::::::::::::::::::::EW::::::AE::::::HT::::::::::::A::: consensus ERRYDLRHADDAAADADALDAYDDPLDARELVKHDDDGRYRPLKTAPTLAGGWVFPDLDG #oth 3.2.22112112321336124121.11..3.113.22121...11112143..3.22.11 VNG1092 S::::V:::::VD::T:T:AT:T::R:::::::::::DG::::S:::S:PH::A:T:::: NP1590A H:V:T::NEA::S::TE::AVHT::::::H:::::N:::F:::::::::PT::A:V:::: rrnAC1285 ::V:::::V::TGT:::S:::::::::::T:A::::RD:::::::::::QS:::::E:GP Hmu1690 N::::IS:V::T:T::TP-ER::::::::T::::::::K::::::::::RT::Q:V:::P hla0273 :::::V::::::GVQI:E::::::::::::::TL:EK::::::::::S::::::::::GP HVO_1129 ::S:E:::::E::::R:D::::HE::A::Q:ATY:EK:::::::SGSN:::::L::A::: Hbo0431 ::::EI::E:::D::RSK::E:T::::::::ATF::R:::::::::::IVS:::::E::: consensus RDLVETVEFFYPATVANWHREREGELDVSHWRETMERQTGIYGVVKTWDRGEGHEHVNWV #oth 4213211132...112..21..3.2...3..21233..1.1.1113111113121112.1 VNG1092 GA::D:IDYV::::::::::::::S:::D::ADVAD:::::::I:SDL:E----DALE:A NP1590A :A:A::::YI::::I::::L::Q:D:::::::::::::S:::S:I::::::::Y:::::: rrnAC1285 TE::QA:D::::::IS::::::::::::::::D:VD:::::::::::::::D:Y:::::: Hmu1690 A:::Q::::V::::::::::::T:D:::N:::::::::S::::::Q:::::::Y:::::: hla0273 ::AY:A::TI::::::::::::::::::T::::::A::S::::::::::::::::::D:: HVO_1129 C:::::::T::::S:P::Y:::R:::::T::EDAIG::::M:S:::::N::D:::::D:: Hbo0431 :::I:A:DA:::::I:::NL:::::::::::E::V:::::::S:IE::N::G:::::E:: consensus AEACCDDSQCLKRREWQYDDETELDVDGGDGEFPCREPCSLVIAAARKWTRLEGEQTQTY #oth 1.1..2....1.....2111112.1111.1.3........111211.11.2..2.2311. VNG1092 :::::V::::::::::DR:EDDA:::PR:::::::::::::FV:::::F:T::R:D:RE: NP1590A ::::::::::::::::::::::D:::::::::::::::::::VT::::::K:::::S::: rrnAC1285 :::::::::::::::::::::::::::::S:K::::::::::::G:::::K:::::S::: Hmu1690 ::::::::::::::::E::::::::::::::::::::::::::S:::R::K:::::A::: hla0273 E::::::::::::::::::::::::::::::V::::::::V:VS:::::::::S::PR:: HVO_1129 :::::A::::V:::::::::D:D::::::::A::::::::V::::S:::::::::E:::: Hbo0431 ::T:::::::::::::::NE::::EA:::::V:::::::::::::S:::::::S:E:::: consensus EFELTPSEKEQVEDIIDAVADGRIDDIREADVYEGANRYRTRFLRAKRFDDDGNLGGVPT #oth 1.....1..1.2.3.12...111212.....211......1....1.11.121212.11. VNG1092 T:::::A::::I::::G::::D:T::::::::::::::::::::::::M::H:-:S:T:: NP1590A :::::::::::::E::::::::EA:::::::I::::::::A::::::::::::RFC:::: rrnAC1285 :::::::::::L:A::::::::EA:::::::I::::::::A::::::L:::EE:::::E: Hmu1690 :::::::::::::R:VE:::N:ETEA:::::::D:::::::::::::L:::E:::C::E: hla0273 :::::::::::::E:::::::::::E:::::TK::::::::::::::::::E:::::::: HVO_1129 :::::::::Q::::::::::::::::::::::::::::::A::::::L:::::::::::: Hbo0431 :::::::::::I:::::::::::::::::::::::::::::::::T::::E::::S:T:: consensus DAED----------- #oth 345232232222111 VNG1092 YP::HDDDDDDGDHH NP1590A :DT-::::::::::: rrnAC1285 EQ--::::::::::: Hmu1690 :::-::::::::::: hla0273 GPDEEDEE::::::: HVO_1129 ::P:DE::::::::: Hbo0431 :RA:EEEAAGHDD::