| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||
|---|---|---|---|---|---|---|---|---|
| Consensus score | 5403 | HVO_0215 | Hbo1340 | VNG2320 | rrnAC2605 | Hmu2931 | hla0038 | NP1400A |
| 4373 | HVO_0215 | 5525 | 4302 | 3826 | 3736 | 3694 | 3543 | 3507 |
| 4449 | Hbo1340 | 4302 | 5499 | 3838 | 3848 | 3864 | 3544 | 3622 |
| 4284 | VNG2320 | 3826 | 3838 | 5265 | 3859 | 3832 | 3351 | 3422 |
| 4490 | rrnAC2605 | 3736 | 3848 | 3859 | 5414 | 4447 | 3448 | 3464 |
| 4495 | Hmu2931 | 3694 | 3864 | 3832 | 4447 | 5448 | 3429 | 3448 |
| 3999 | hla0038 | 3543 | 3544 | 3351 | 3448 | 3429 | 5673 | 3757 |
| 3972 | NP1400A | 3507 | 3622 | 3422 | 3464 | 3448 | 3757 | 5745 |
764 symbols consensus --MMFPLQA---TTRETFWTIGPVGKALFYYLAALAVLVFLYGVYERFARYARGSEDPFD #oth 112543213112411311141233222311511341321.21.1.3.222.13.211222 HVO_0215 :::D:AA::::DV::::::::S:::E::::G:::I:S:::::::::::::::K:G::::: Hbo1340 ::-:TI::S::EP::::::::S:::EVV::A::TT:I:::::::::::S::TQ:E::A:E VNG2320 ::-------:::----------------------M::AI::::::Q:::T::::::::TE rrnAC2605 :::SSI::T::::::P:::R::D::::::::::::::I:::::::N:VT:::K::::::E Hmu2931 :::TV:::T::::::P:::Q:::::::V::::::::L:::AF:::::LT::T:::DE::P hla0038 ::-:T:::::::A::::::::::I::VA::W::VV:I::::::::A:::A::::::::R: NP1400A MLPA:::::NEEV::Q:::L:SNYE:V:::F::T:T:A::V::T:Q::::::D:ED:W:: consensus RLDNLPGRIVSAAKLVLSNEKQFDRDLVAGVMHAFILWGFLTLLIGTTILGIDIDVYRPL #oth ..23.13.2221223121.21.12..221.1..1.13.......11....21.2141133 HVO_0215 ::SD::::T:R:::V:F::::::K::RF::::::::M:::::::::::::A:::::W:RV Hbo1340 :::D:::::AR:S:V:F::::::::::YG:::::::::::::::::::::F::M:I::K: VNG2320 ::S:::::V:::::::A:::::::::::::L::T::::::::::::::::A::M::WTKA rrnAC2605 :::E::Q:T:A::Q:A:::R::L:::T:::::::::V::::::::::::::::::F:::: Hmu2931 :::A::S::L:G:R:A:T:A:::::::::::::T:VF::::::::::::::::M:L:::: hla0038 ::T:::A:T:A:T:T:::::N::::::Y:::::T:V::::::::VA:::::F:::::::: NP1400A :::::S:::A::::IAA::::::N::::G:L::::::::::::::A::::F::-EW::VF consensus T-----GES-FFVGDFYLSYSFVMDAMGLLFVVGVGMALWRRYVVRTDRLWGKHTSREDD #oth 21111113.1.11.2...1.1112.12.1...1.1.2.22...32155..111..33..1 HVO_0215 :::::::S:::::::::::::::::L:::::::::::::::::G::HP:::::::GF::A Hbo1340 :::::::M::::K:::::::::::::L:F:::I:::::IY::::::EK:::::::G:::: VNG2320 L::::::Q:S::::E::::::L::::::::::::::V:IY:::W::NQ:::::::::::: rrnAC2605 ::::::::::::::R:::::::::::::::::::::V::::::GRKL:::HDR::::::: Hmu2931 ::::::::::::::E:::::::::::::::::::::V:M:::::R:::::H:R::A:::: hla0038 A::::::::::W::::::A:Q:TV::F:::::::::::MV:::RD:DG::::::::L::: NP1400A :IALGERQ:::W::::::::QL:T::L:::::::L:I::::::::::E:::::::NW::A consensus AFVWTLFLLGVGGYVTEGLRILGTSFP---SFETVSFVGWAVAEVLAAAGMSPGLAAAAY #oth 31212..31.2..1131121.1.243223123.11..1.3231421542.24324.233. HVO_0215 :::::::F:::::::L::I::V::D:::::D::::::::YF::L:FD::::GQ:::QTL: Hbo1340 L:I::::V::A::::I::::::::E:::::DW:::::::YF::I:FET::::::T:EML: VNG2320 ::::A:::::::::::::V:::::G:::::::::::::::F::D::S:::VDGS:::::: rrnAC2605 L:LGS::V::::::L:::V::::::TVRDV::::::::::S:K:::VM:::T:EM::G:: Hmu2931 Y:LGA::::::::::::AV::::::AVRNV::::W::::::GK:W:::::V::EM::::: hla0038 :::::::A:::::F:VQA:G:V:QPAR:::AD:::::I:M:M:AGFRWV:LT::G:E:I: NP1400A FL::S:::I:I::FLL:::::V:A:E:IT:AV:P:::::T:T:LG::GI:VNESI:::V: consensus PVIWWSHSLLALAFVAAVPYAKPFHMLSSFANVVTRDEKAGARLPGVPADASPDEIGPSS #oth 223....112113.1.21.....1..11.1..1.11.12..4...3..2.3211211232 HVO_0215 WFG::::A:::::::::::::::L:::T:::::::A:::::T:::K::::TP:::::YV: Hbo1340 WAG::::A:I::G:::F:::::::::I::::::::A:::::K::::::E:E::::::YT: VNG2320 :A::::::I:::G:::::::::::::I::Y::L:A::AD::R:::R:::::::E:::::E rrnAC2605 :FV::::::V::W:::WI::::::::::::::L:A::::::V::::::S::::E:::::D Hmu2931 ::::::::::::::::W::::::::::::::::::::::::K::::::E::::E:::::E hla0038 G::::::::::F::I:WI::::::::I:::::::A:::N::::::N::::L--:HTNAE: NP1400A ::A::::A::SFL:I::I::::::::::::::::::::::::::::::S:L--:ATNAE: consensus IDDFSWKQLLDQDACTKCGRCSSVCPAKASGRPLDPRDVILDLKAYRE------------ #oth 21.11..221.4.........111...122..1....1......4..1111111111111 HVO_0215 E::::::AM::M:::::::::TDA::::::::N::::::::::::::::::::::::::: Hbo1340 :E:L::::I::T::::::::::::::::E:::::::::::::::Q::::::::::::::: VNG2320 :E:::::::::H:::::::::::::::::A::::::::::::::S::::::::::::::: rrnAC2605 :::::::::::H:::::::::::::::::::::::::N::::::R::::::::::::::: Hmu2931 :::::::::::::::::::::::A::::E:::::::::::::::Q::::::::::::::: hla0038 L:::T::E:M:G:::::::::TDA:::DTV::N:::::::::::::::SVSDDPVAGRRD NP1400A :::::::EM:::::::::::::::::::::::::::::::::::E::R:::::::::::: consensus ------EVDA-GG-EEVDIVADGGTSVIDAETMESCMSCMACMDACPVDIEHLTHFTEMN #oth 111111322221232421.1..1.21.1.131.....1..........1...122..2.. HVO_0215 ::::::S:::::::DSI::::::::::V:::S:::::A:::::::::::::::::::::: Hbo1340 ::::::DL::::RT::I::::::::::::SS::::::A:::::::::::::::S:::::: VNG2320 ::::::G:AS::DR::::::::::::::::S:::::::::::::::::::::V:Q::::: rrnAC2605 :::::::R:::::::D:P:I::::::::::H:::::::::::::::::::::V:Q::::: Hmu2931 :::::::R:::::::A:::::::::::V:SA::::::A::::::::::E::::::::::: hla0038 EMATDGG:ASA:::GT:P::::E:-G:::S:S::::::::::::::::::::::S::K:: NP1400A ::::::SLETDDDA:TM:::::::E:::::::::::::::::::::::E::::KS::R:: consensus RRLTESGQMDENVQDAMMNVFQKGNTFGDPQRKRPDWTDDLD-FEVPDAREEEVEYLWYV #oth .1.214.3423321212112113..1..21421.1..121..11112...133.112... HVO_0215 :::::T::QQ:P::E::::I::N::A::::::::::::::::::::::::D:S::F:::: Hbo1340 :::::T::TQ:P::E::::I::N::A::N:A:::::::R::::::::::::::::F:::: VNG2320 :::::::::NK::E::V::A::::::::E:D::::::A:::::::::::::QS::::::: rrnAC2605 :::::A:E:::H::::::::::H:::::::E:A:::::E:::::::::::D:P:::I::: Hmu2931 :::::::::::H::::::::::Q:::::E:E:::::::EE::::D:::::::P:D:C::: hla0038 :Q:VDE:AV:S:L:SVFQD:M:::::::ES:SA:G::A:E::DL:ID::::H:::::::: NP1400A :Q:ADQ:DIQPSM:EVFQ::MT:::::::SPGA:G:::EE::::::T:::DTD::::::: consensus GDYPSYDERNQKVARSLARVFEAADVSYGILYEDEQTDGNDVRRVGEEGLYEMLVEDNAD #oth .....1.1..241.21..32.1421122...112.33....1..1...1..211112222 HVO_0215 ::::::::::RA::::::QI::E:G::::::::::GH:::::::::::::::::::::V: Hbo1340 ::::::::::RR:::::::L::LTG:::::::::::H::::::::::::::::::::::: VNG2320 :::::::::::HI:::::T:::T:G:D:::::::::N::::I::::::::::::A:::IA rrnAC2605 ::::::::::::I:QA::::::::::D::::::A:::::::::::::::::::::::::E Hmu2931 :::::::D:::EI:KA:::::::S:A:::::::::::::::::::::::::::::::::A hla0038 :::::F:D::K::::A:::L:DE::::F:::FD::K:::::I::I:::F::LE:AGHHVE NP1400A :::::::D::K:::::::KI::H::AEV::::DE:VY::::I::::::F::VEQAGTLI: consensus AIADCEFDKIVCTDPHSYNTFKNEYPEFDFEE--DDP-----------------VFHYTQ #oth 225..21221.1....11..131..11223322331211211212211221222.3.1.. HVO_0215 :M:::::::::::::::::::::::::M:DSF:::Y:::::::::::::::::::Y:::: Hbo1340 ::H::::::::::::::::::L:::::M:P:F:::Y:::::::::::::::::::::::: VNG2320 :FD::DYE:T:::::::::::S:::DQ:G::N::A:S::::::::::::::::::Y:::: rrnAC2605 ::L::::ES::T::::A::::M::::::EAC:WGE:D::::::::::::::::::::::: Hmu2931 ::Q::::GR::::::::F::::H:::::EAC:WEG:D::::::::::::::::::A:::: hla0038 TF::::::S:::::::::::I::::::V::A:FA:::MMPFDREEPWNADGEVD:::W:: NP1400A SFE::A:E:::::::::::::::::::V::::FA:::MMEFDIEGYWNESGDIE:Q:W:: consensus VVEDLVEDGRLGLAGTEL-DYTVTYHDPCHLGRYNGEYEAPRELIRATGADLHEMPRNRD #oth 2.14.1341112131111132..............1.1....2111...2213....1.1 HVO_0215 L::R::G:D::::::D::AAQ::::::::::::::::::::::V:::::VE:A::::::: Hbo1340 :::S:::S::V::D:::I:N:::::::::::::::D::::::::V:::::T:A::::::S VNG2320 :::G::NE:A:::S::::::D::::::::::::::::F:::::VV::::VT:D::::::S rrnAC2605 ::A::ASA:A:::::::::::::::::::::::::::F::::D::::::::::::::::: Hmu2931 ::A::::T:::AVPA:-::TD::::::::::::::::F::::A::D:::V:RV::::::: hla0038 :::E:::::::D:S:D:::::::::::::::::::D:::::::::::::::::::::S:: NP1400A T::E:::T:AVA:D:::::::::::::::::::::D::::::::V::::C:::::::::: consensus DSFCCGGGGGGLWMDLEEETKPSEERLREALEDTDAGAAVEKFVVACPMCMTMYEDGRKT #oth 2............1121.15......1...11..21.33111........2..1...... HVO_0215 Q::::::::::::::HD::S:::::::::::D::TG:--::R::::::::A::::::::: Hbo1340 ::::::::::::::E:::::::::::::::::::::::::::::::::::A::::::::: VNG2320 :::::::::::::::FD::P::::::I::::::::::PD:DR:::::::::::::::::: rrnAC2605 ::::::::::::::::::::::::::::::::::E::::::::::::::::::::::::: Hmu2931 :::::::::::::::::::A::::::::::::::E:::T:DR:::::::::::::::::: hla0038 :::::::::::::TEH::TV::::::::::V:::::::DI::::::::::T::F:::::: NP1400A N:::::::::::::E::::E::::::::::::::E::S:::::::::::::::::::::: consensus GDYEDDIEIVDVAELLVEALEAKSAA-----------AD----- #oth .11.112112112..22..2332532444233333332211111 HVO_0215 ::::EA:DV::IS::V::::D::A::TGTGADTTPAS::::::: Hbo1340 :::::::::I:I:::::::::S:QG:SVESDGTASTA::::::: VNG2320 :G:::::::T::T::::::I::SGS:AASGVSETPAA::::::: rrnAC2605 :G::E:L:::G:T:::A::VSES---:::::::::::--::::: Hmu2931 ::::::::::G:T:::A::IA:E::::::::::::::--::::: hla0038 ::F::AV:::::::::I::V:TE:--:::::::::::--::::: NP1400A :GF::::::::I:::I::::D::N:TITASADADAGTGAAPADD