| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 1582 | Hbo1427 | hla1648 | HVO_2151 | Hmu3414 | NP4286A | Hut2039 | Hbo3454 | rrnAC3486 | Hmu2188 | hla2175 | NP1532A |
| 452 | Hbo1427 | 1585 | 282 | 411 | 229 | 374 | 345 | 384 | 336 | 360 | 271 | 338 |
| 623 | hla1648 | 282 | 1813 | 503 | 385 | 530 | 452 | 487 | 499 | 482 | 476 | 536 |
| 962 | HVO_2151 | 411 | 503 | 1555 | 505 | 777 | 745 | 804 | 804 | 839 | 573 | 489 |
| 676 | Hmu3414 | 229 | 385 | 505 | 1138 | 557 | 526 | 555 | 578 | 527 | 417 | 341 |
| 1022 | NP4286A | 374 | 530 | 777 | 557 | 1623 | 839 | 893 | 881 | 864 | 601 | 517 |
| 1122 | Hut2039 | 345 | 452 | 745 | 526 | 839 | 2005 | 980 | 989 | 984 | 645 | 492 |
| 1190 | Hbo3454 | 384 | 487 | 804 | 555 | 893 | 980 | 1647 | 1071 | 1042 | 672 | 509 |
| 1197 | rrnAC3486 | 336 | 499 | 804 | 578 | 881 | 989 | 1071 | 1706 | 1143 | 693 | 565 |
| 1175 | Hmu2188 | 360 | 482 | 839 | 527 | 864 | 984 | 1042 | 1143 | 1551 | 707 | 592 |
| 825 | hla2175 | 271 | 476 | 573 | 417 | 601 | 645 | 672 | 693 | 707 | 1846 | 685 |
| 639 | NP1532A | 338 | 536 | 489 | 341 | 517 | 492 | 509 | 565 | 592 | 685 | 1677 |
298 symbols consensus -----------------MP------------------------------RATLTLTIPE- #oth 122222212222212122211111111111111111111111111111142525344261 Hbo1427 :::::::::::::::::::::::::::::::::::::::::::::::::HLKIK:NGEKI hla1648 ::::::::::::::::::T:::::::::::::::::::::::::::::::L::R:DF:S: HVO_2151 :::::::::::::::::::::::::::::::::::::::::::::::::::::SI:L::: Hmu3414 :::::::::::::::::--::::::::::::::::::::::::::::::----------: NP4286A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut2039 MVTTGTPGGVNLSSNTFG:AAGEPDGQPPLSNMFGTITLVRPEHVQDMVH:::::S::R: Hbo3454 :::::::::::::::::::::::::::::::::::::::::::::::::::N::V:::D: rrnAC3486 MFGSTDAGVGRIYSVTP::::::::::::::::::::::::::::::::H:E:::::::: Hmu2188 :::::::::::::::::::::::::::::::::::::::::::::::::::E:::::::: hla2175 :::::::::::::::::::::::::::::::::::::::::::::::::Q:R:LVDL:D: NP1532A ::::::::::::::::::T::::::::::::::::::::::::::::::L:RIRVDL:G: consensus GIWIGDLSRAFPDATFRVLAAVP-GDEAGVGLVEITAPDLEAVLRAIREHESVTDLEILD #oth 661435224642346424242551544534445434454774338555573625734237 Hbo1427 :G:LAE::TE::ADV::L::TQL:R:QGALVTL:VRT::GGD:IQEFETTPE:GNV:V:H hla1648 :S:L::V:::R::::L:TTET:A:AV:GD:TALTV:GT:RAETVE:L:A:DR:DRID:V: HVO_2151 QV:VS:::GRY:::E:T::::M::A::T:::::::R:A:I:P:VTT:D:Y:::VSVT::E Hmu3414 -----------------------:----------------------------::::TVF: NP4286A A::M:E:::TY:ETRL:::S::K:N::G::A:::L:S:HE:::IS:A::YD::AAV:V:N Hut2039 R::::A::QDH:ESCI:::S:F:K:E:S::::::VDG::VP::V:::D:E:T::::AV:G Hbo3454 ::::::VT::H::::V:I:S:LT:::::::::A:::::::QD:VSD:QDSD::VE::::Q rrnAC3486 E:::::V:::YD:::::I:S:L:::ED:::::A:::SD::P::::D:ENR::::T::::S Hmu2188 EV:::S:::S::::E::I:::::::E:S::::T::::DE:V:I:GQMD:S:A::S::::Q hla2175 :P::A:V::D::::G::::T::::DES::FA:IRL::R:VDD::A:M:D::ALAKVSVMA NP1532A DA:VSTV::S:::::::L::TM:::ADH:EAV:SVE:DRP::::D:MADCDPDHEPSPVS consensus REDDTALVQFETTMPLL-LFPLQESGIPLEMPFTIQDGEATWEVTAPQERLSELGEQLDE #oth 5865532113315613213733531.31324.55251.5342233442331232153125 Hbo1427 ADSQVV:L::L:KHSRA:YD::Y:::CISIY:T:L:N:WFSVH:V:GHDS::SYV:E:TA hla1648 :TGPATR:RVVAPA:PPHVAAAR:V:::I:D:VAVT::R::LDIVDDRS::TAF:RR:TA HVO_2151 AQPER::::::::E::::ILT:S:V:::::L:I::V:::V:V:::::R:N::::::::TQ Hmu3414 T:AEATR::V:::V:::::TS::D::V::::::EVV::RM:L:A:L:::T::::::T::N NP4286A D:AEGL:L:L:::::::::E:::R::V::::::NV::::VV::::TSR::::M::D::ES Hut2039 :HE::::::::::D:::::::IIG::::::L::D:R::::R::L::S:D:::::::::ET Hbo3454 QYQ::V:::::::::::::::V:D::V::T::::::::Q:E::L::::H::::::T:::: rrnAC3486 HR::S:::::::S::::::::V:G::V:::::::LS::::V::IS:::::::::::::E: Hmu2188 :WE:::::::::SD:::::::V:G:::::::::RLS::::R::I::::::::A::Q::E: hla2175 :G:GV:T:RI::NA:::::VAAKR::L:I:::LD:EN:V:EVD::GEH::VAA::KRF:: NP1532A QT:RGLT::LD:AQ:EP::RAAS:::L:V:P:CR::N:T::VDLRGSHD:::AF:Q:::A consensus FGIPFTVERIRQHVE-TEQLLTDRQRELLQAAVERGYYDTPRECTLTELADALGIAKSTC #oth 41252624536266114342..35.652262.235.1..2..6211211.443231..12 Hbo1427 AE::YQ:LSLS:SHD::ATI::N:::QFIET:L:E:F::D::A:::::::AT:D:H::AA hla1648 E:VTVGI:A--SDAD:E:PI:::A::D:VL:::AA::::::::::::D::K:R:L::::: HVO_2151 :::::DLVS:H:SID:::S::::D:YD::ET::SE:::::::T:::::::E:V:L::::T Hmu3414 :::RY:::::Q:ES::SDS:::E::EWV:DE:I:::::::::RT::VD:::E::V::::: NP4286A L::S::::S:Y:Q:::S::::::H:WDV:S::::C:::::::S::QE::::E:::::::: Hut2039 L::S::::QL::::::P::V:::::TT:VT::I:::::::::::::::::::QDM::::: Hbo3454 :::::::NE::::I::P:::::E::LR:VS::::::::::::::S::D::ET:EL::::: rrnAC3486 :::S:S:D::Q::L:::::V::ES:L::V:E:IDA:::::::::S::D:::RV::::::: Hmu2188 :::::H:::VS:::::::::::GS:L::I:::::N:::::::D:S:::::SEV::::::: hla2175 M:LEYELD:V::R:D:PVR::::::Q:::LT:::L::::V::RF::::V::HV::::::: NP1532A A:LDYE::FVGGFEDGADR::::T:::::MT:IDL:::::::G:::::::AH:D:::::: consensus SETLHRAEEKIVKQFVEDEPAA------------------------------------ #oth .1311.1.34232524544576576665422122222222222222222222221111 Hbo1427 :RLR::::SRLITHVATGFAQ-:::::::::::::::::::::::::::::::::::: hla1648 ::::::::GRVLRR::AG:FDDEDSETSVGKGIGDESEREPDRDGHHRTVTALGT::: HVO_2151 ::K:::::G:VM:A:LARDD:TVG:::::::::::::::::::::::::::::::::: Hmu3414 ::I:::::GRVL:EYRD::APSEVVVSSS::::::::::::::::::::::::::::: NP4286A :::::::::Q:I:R:LSNHEDKSSVAPTP::::::::::::::::::::::::::::: Hut2039 :::::::::::::G:F::::T:SARRRI:::::::::::::::::::::::::::::: Hbo3454 :::::::::::::::L::LDGTTIESPHP::::::::::::::::::::::::::::: rrnAC3486 :::::::::Q:L::::S:H::R:::::::::::::::::::::::::::::::::::: Hmu2188 :::::::::::::E:::ELG--:::::::::::::::::::::::::::::::::::: hla2175 ::::Q:V:RTV:RE::D:L:TRPLDEEVDAAGDSASDGGDAASETDAESAPNRPTYHS NP1532A ::::Q:::GNLI:::AREHFS:PAQPASD:::::::::::::::::::::::::::::