| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 1473 | Hut0524 | Hbo0401 | Hmu1729 | Hut1419 | rrnAC1421 | HVO_1157 | hla2355 | NP4016A |
| 681 | Hut0524 | 1555 | 425 | 509 | 542 | 551 | 385 | 357 | 422 |
| 756 | Hbo0401 | 425 | 1587 | 462 | 654 | 583 | 521 | 530 | 534 |
| 814 | Hmu1729 | 509 | 462 | 1380 | 641 | 755 | 606 | 501 | 545 |
| 976 | Hut1419 | 542 | 654 | 641 | 1562 | 776 | 665 | 507 | 580 |
| 951 | rrnAC1421 | 551 | 583 | 755 | 776 | 1470 | 662 | 555 | 567 |
| 895 | HVO_1157 | 385 | 521 | 606 | 665 | 662 | 1557 | 694 | 564 |
| 827 | hla2355 | 357 | 530 | 501 | 507 | 555 | 694 | 1601 | 727 |
| 793 | NP4016A | 422 | 534 | 545 | 580 | 567 | 564 | 727 | 1429 |
242 symbols consensus ----------------RRGQAHTLEAIIAGMLLLASLVFALQATAVTPLSASTSSQHIEN #oth 11222111222324344121222212221231213223.13.21....1121111.2121 Hut0524 :::::::::::::::MD:::LY:::GV:::::::L::L:VV::L::::Q:VNGG::EAI: Hbo0401 ::MKSDRRAESRARSD:::::::::::A:SI:::S:IA::::V::::::TG:::N:R::D Hmu1729 ::::::::::::::::----------V:::L:::S:V:::M:M::::::::::::::::: Hut1419 MSTGADRRSRRDACDG:::::::::G::::L:V:S:I:::::V:::::::::::::::Q: rrnAC1421 ::::::::::::::::M:A::::::::VS:::::::::::::M::::::::::::::::: HVO_1157 :::::::::::::VTVS:A:::A::::V:A:V::::VT::::V::::::T:::::::::: hla2355 :::::::::::MRTTDD:A:::::::FA:AI::V:A:T::::::::::::::::N::::: NP4016A ::::::::::::::::M::::::V::FV:AV:IVGG::::T:::::::::::::N::::: consensus QQRAVADGVLASAAENGALKRAVLYWDPSNGSFHGT----DDRGYYAA-------APPN- #oth 1.4243522.22343423.44332212434461344211144523254111111131132 Hut0524 :::::::TT:Q:IN:T-T:R:::T:::S:D:-::C:P:::S:VKF:PGYADTSSCN:::P Hbo0401 H:STL:ED::::QSA:ET::AGL:::NE:ERNW::A::::QWD::HDG:::::::::E:: Hmu1729 :::S::Q::::T::DR:::STS:R::NDTD:R:::A::::P:I:F:TN:::::::E::D: Hut1419 ::::ATA::::::::S:::E:TA::::E:GP:::D:::::GP::R::S::::::::::T: rrnAC1421 ::Q:IGH::::::VAE::::P::::::N:TAQ::N:A:::GG:E::TN:::::::G::D: HVO_1157 ::A:::::::TA:::T:::::T::FTH:E::::YDI:::::A::::VD:::::::GG:P: hla2355 ::::::TDL::TS::::D:EA:I:H:N:E:ET:ASSPPEV:GE::PR:::::::::G::G NP4016A ::E:TVE:L::T:ERE:M:QE:::F:::DEEE:Q:V::::P:Q:T::::::::::G:::: consensus -----NRFGEALNRTLDDRGIAYNVYL-HYARPD-GGRRTTRMVYMGEPSDNAVRASRTV #oth 22212461.33.24213412212.2311425534156461423124.4.123.1321232 Hut0524 DALPP::::AI::AS:-GS:YS::IVV:SSQDTS:NNVLRQ::::Q:Q:GSG::::::SI Hbo0401 :::::ISL:Q:::DA:L:::V:::LNV:YFW:N::-Q:IREQV::L:::::H:SV:TW:: Hmu1729 :::::TT::QI:E::::E:S:S::::::R:R::S:::IA:R::I:R:R::::::S::::: Hut1419 :::::-E::TL:EE:F:R::::::::V:TF:I:G:DDQ:RIQ:::Q:A:::S:::V:H:: rrnAC1421 ::::::::::L:E:AF:Q::::::::::RFQNTQ::RTV:::Y::S:::::::::::H:I HVO_1157 :::::TA:::M:DESFL:::::F:::::::L:DR:EV:::::L::::::::H::SRT:L: hla2355 FVAPLGG:::::::::V::Q::V::D:R::NTT:RTE:N::SLID::S::N:::S:T::I NP4016A :::::-D::::::K::LE:Q::F:IDV::::E:::::VG:ES::R:::::::::A:T:AL consensus TLTDDDALRAAD----------GTTTTTRLG--DTDAFYAPDDTGSGPLYNVVRVEVVVW #oth 3141135.3521221111111113636475332353451443564525312324.1112. Hut0524 LVF:::P:I::::::::::::::SESG:Q--::AQGNL:GT:SHP:NSM::LL::::I:: Hbo0401 ::Y:::R::D:::::::::::::NL:A:T:SD:AE::YF:::IEPD:AV::::V::::T: Hmu1729 ::EP::P:MRP:::::::::::E:ANESVTV::GSASR:PVQQV:TSV-:::::::::A: Hut1419 :::::A::::::::::::::::::P:::NVS::E::S:::::VSQT:L-:::LS:::::: rrnAC1421 ::M:::H::D::::::::::::::RNS:::::::PATD:TVS:::KNV-::T:S::::A: HVO_1157 ::::::::TEPGTSPGGDPRAVE::::LESVAAE::ET:FIQ:GSA::::A::D:::::: hla2355 V::::MN:TTPGYE::::::::ES:LRGLA:GT::G::::TE-::::::FAY:E:RI::: NP4016A GVY:SSE:TSDGYE:::::::::EQL-----:::GTE:::D:IDDNSE::T:IE:::::: consensus RI #oth .3 Hut0524 :G Hbo0401 :M Hmu1729 :: Hut1419 :: rrnAC1421 :: HVO_1157 :M hla2355 :M NP4016A :K