| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 1359 | hla2354 | NP4018A | Hut0523 | Hut1420 | rrnAC1420 | Hmu1728 | HVO_1158 | Hbo0400 |
| 556 | hla2354 | 1349 | 453 | 221 | 321 | 287 | 250 | 373 | 324 |
| 604 | NP4018A | 453 | 1334 | 299 | 300 | 287 | 239 | 282 | 309 |
| 610 | Hut0523 | 221 | 299 | 1736 | 417 | 350 | 297 | 273 | 328 |
| 789 | Hut1420 | 321 | 300 | 417 | 1423 | 610 | 501 | 407 | 427 |
| 760 | rrnAC1420 | 287 | 287 | 350 | 610 | 1529 | 567 | 367 | 407 |
| 650 | Hmu1728 | 250 | 239 | 297 | 501 | 567 | 1221 | 267 | 342 |
| 519 | HVO_1158 | 373 | 282 | 273 | 407 | 367 | 267 | 1268 | 422 |
| 583 | Hbo0400 | 324 | 309 | 328 | 427 | 407 | 342 | 422 | 1408 |
250 symbols consensus ---------R---------R---------------------------------------- #oth 111222353343343455515111111111111111111111111111111111122235 hla2354 :::::::::-:::::::::-:::::::::::::::::::::::::::::::::::::::M NP4018A :::::::::-:::::::::-::::::::::::::::::::::::::::::::::::::MI Hut0523 MQFAETIVPTPNYSGCKAG:SSAIKSILALRIAITRLIGALGTRIPGGGRVQLPWVAERS Hut1420 ::::::MFPQKLSPERSSS:D::::::::::::::::::::::::::::::::::::::: rrnAC1420 ::::::MNR:RNETQSTNR:A::::::::::::::::::::::::::::::::::SQSLW Hmu1728 :::::::::-:::::::::-:::::::::::::::::::::::::::::::::::::::: HVO_1158 :::::::MR:R:::GGDDA:E::::::::::::::::::::::::::::::::::::::T Hbo0400 :::MTSGRG:ETERECRHE:K::::::::::::::::::::::::::::::::::::::: consensus -VEHRRGQTTLDFAVGVSIFLLVVAFVFAFVPGIFDPFAAG-AQAETVVADRAADGLAED #oth 4545512113311341422113223123322.3324..4311453532332121341253 hla2354 WDNGN:A::PI::T::AGV:::TL:::I::::TL::::S:A::T:SP::S::V:A:V:G: NP4018A S:PTD:::::::::I:T:V:::ATI::V:Y::TM:::::G::GGSKL::::H::AT:SG: Hut0523 A::D:::::N:::IL::T:LVVA:V::WL:L:NL:G::VD:DTHSDSLA:E:::NN:::: Hut1420 :----:::::::::F::::::::L::A:T:I:::LQ:::E::TA::::G:N::::T:::G rrnAC1420 IE::::::::::::I:M:L::S:LI:I:L:I::LLS::S:::V:E:::TT::V::::TMG Hmu1728 :---------------M:L::A::L:::L::::VVE::T:::::E:::AV::V::D:SRA HVO_1158 SGRSA:A:::I::::::G::::A::W:VGTI:Q:L:::-EA:E:DRPL::N::::S:TQR Hbo0400 :Q::E:A:::M::T::I:::::::V::V:::::::E::-E:::-DQ:QT:::LGTS::S: consensus LLG-SPAEPDVLNETCTVAFF-----DNGPASGCGF-DGETATERLGLG-ARQNVNVTIR #oth 3.323445143.355.144.1133343553342.3325352534453122456522.235 hla2354 ::AA:::::G::SPA:::::L:SANATL:SEAD:HPAIA:SPAAHF:ID:--GD:Q:V:H NP4018A ::AT:T:::GT:SVG:VA:::::::::A:::EF::T::FDDEEQM:A:D:-DR:AA:::H Hut0523 A:K:TQPGA:E:D:D:V::::::::MGSSS:P:::::S:S:L::QI::::ELHFA::S-- Hut1420 T:::D::T:Y:::T::::G::::::::T:VP:::RY:T:S::::::SI::SF:D::::L: rrnAC1420 M:::::QQ:Y::E:H::QE::::::AG:A:P::::YNS:GS:E::V::NP::E::::::: Hmu1728 T::::AER:K:::G:::AV:::::::::RS::::H::A:::TN:::::D:S::R::::VT HVO_1158 ::V:DDEN::::DPV::E::::DGDSPDE:PGD:DY:GSADPNTAT:I:::SYGL:::LS Hbo0400 A:::E:GT:AA::A:::WS::RQMQTGTDTTAD:::::AT:D:VAAT::VTDVA::::VF consensus G---ADATN-SPLCWDGPTAELADR-HNCDSGDPDLTTGDPPPST-RDVVTARRVVSLDG #oth 61224555563423232664544441534544455233243532655524113.3.2232 hla2354 A:::P:ER:P:T---NAS:LSI:T:::GRFEVE::R::A::SDAAGK::TVSQ:L::IG: NP4018A P:::L::SPT::ATL--:ETAID:S:::V::-:A::AWTNA:D:QRQ::AV:T:T::VA: Hut0523 -::::EF::GTV:A:H::G:GG---:-FS:::T:K:SR:GTHG:::S::SV::::::I:: Hut1420 :::STSG:DY:L:::N:TALTE::S:P::GT::KR:A::::I::VSIPTI::::::AI:: rrnAC1420 :NAT:T:AADET:::::GSE::VEAGTG:GTI---::::GN::TNNDAS:::L:::::N: Hmu1728 RNGTTAREGA::::::AD::S:R:::SD:E:::VS:RA:E:TTADVDES:::::::::NR HVO_1158 Q:::-----:---------------:-:RSVVE---:::E:V:T:::S::::::A:L::: Hbo0400 D:::-----:-----::AV:::DSP:DGIAGTKRE:RA:P:V:TS::G:A::::A:L::D consensus DQARLRVRVW #oth 454434.23. hla2354 T:Y::T:::: NP4018A ::Y:MT:E:: Hut0523 QR:V:V:::: Hut1420 TT:VI::VI: rrnAC1420 QDVTV::VM: Hmu1728 EVVT:E:VL: HVO_1158 :LHE:S:::: Hbo0400 RTRQ:V::::