| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||
|---|---|---|---|---|---|---|---|---|
| Consensus score | 4242 | hla1380 | HVO_1301 | Hbo0241 | NP2180A | Hmu1494 | rrnAC0538 | Hut0434 |
| 3010 | hla1380 | 4881 | 2616 | 2698 | 2240 | 2277 | 2300 | 1304 |
| 3102 | HVO_1301 | 2616 | 4464 | 2880 | 2203 | 2275 | 2284 | 1264 |
| 3060 | Hbo0241 | 2698 | 2880 | 4408 | 2219 | 2242 | 2289 | 1304 |
| 2814 | NP2180A | 2240 | 2203 | 2219 | 4914 | 2290 | 2296 | 1289 |
| 2979 | Hmu1494 | 2277 | 2275 | 2242 | 2290 | 4991 | 3126 | 1351 |
| 3004 | rrnAC0538 | 2300 | 2284 | 2289 | 2296 | 3126 | 4826 | 1346 |
| 1482 | Hut0434 | 1304 | 1264 | 1304 | 1289 | 1351 | 1346 | 1806 |
788 symbols consensus MAESEQ--ITVAEVSAGPGG--TAEPGTPVDLPVVDLLTGRGFITGKSGSGKSNTASVIA #oth .3142531.2.12312.411222422.53.4....12....2.1..........1...12 hla1380 :T:Q:A:::H::D::E:I::DA:::::S::E:::::V::::S::::::::::::::::VI HVO_1301 :TD:DTET:S:::I:D::::EG:E::::T:::::::I::::::V:::::::::::::::I Hbo0241 :S:DTET:::::D:RD:V::DAN:D:::::K:::::I:::::::::::::::::::::VI NP2180A :G:ET-:::::G:::::DRA::----:DG:E:::::V::::A:V::::::::::S::::C Hmu1494 :::T:H::::::TT:::V:::::D:::HS::::::E:::::::V:::::::::::::::: rrnAC0538 :::T::::::::TT:::::::::G:::ET:N::::E:::::::::::::::::::::::: Hut0434 ::D:D:RT:::::R:D:H:::::GDV:R::S::::E::::::::::::::::::S:::V: consensus EKLLDNGFGLLIVDIDGEYYGLKEEYEILHAGADDECDIQVSPEHAEKLASLALEQNVPI #oth .1..1211121...1........111.1..1.1.1...12.231..111.4......... hla1380 :N::::::PVM:::T::::::::::::::::::::::::V::::::::::N::::::::: HVO_1301 :N::SAN:PV::::T::::::::Q:F:L:::::::::::::::::::R::T::::::::: Hbo0241 ::::S:N:PV::::T:::::::::QF:L::::::::::::::::::::::H::::::::: NP2180A :::::S:Y:I::::::::::::::::::::V:::::::LR:GV:::::I:E::::::::: Hmu1494 ::::::::::::::::::::::::::::::V:G:E::::::TV:::::I::::::::::: rrnAC0538 ::::::::::::::::::::::::::::::V:G:E::::::TDD::G:I::::::::::: Hut0434 :::::::::::::::::::::::::::::::::::::::::TTD::::::T::::::::: consensus ILDVSSYLDEDEARELLTEVAKQLFAKEKKLKQPFLMLVEECHEYIPEKGGMDEAGKMLI #oth ...1.11.12341431111.212....1.12.1...111..2..11..1.112.3.2... hla1380 :::::G::E::T:N:::L::V::::::::R::K:::LV::::::::::G:::::T::::: HVO_1301 :::::G:::DAASD::V:::::H:::::::::K:::::I::::::::::::::::::::: Hbo0241 :::::G:::::D:QK:::::::N:::::::::K:::::::::::::::G:::N::::::: NP2180A ::::::F:::S:::::::::T:H::::::::::::::::::V::::::G::V::C:R::: Hmu1494 :::I::F::QE::ED::::::RH::::A::Q:::::::::::::W:::::SVN:V:Q::: rrnAC0538 :::I::F:::E::ET::::::::::::A::Q:::::::::::::WM::::S:G:V::::: Hut0434 :::I:::::::K:::V::A::R:::::A::C:::::L::::I:::::::::V::C::::: consensus KIGKRGRKHGLGIVGISQRPADVKKDFITQCDWLVWHRLTWNNDTKVVGRILGSEYADAI #oth .11.........2.............1.......1....113111111111222311222 hla1380 :V::::::::::::::::::::::::::::::::C::::::D::::::::::::K::S:V HVO_1301 ::::::::::::V::::::::::::::::::::::::::::R:::::::::::::::::: Hbo0241 ::::::::::::::::::::::::::::::::::C::::::::::::::::::::::::: NP2180A :VS:::::::::V:::::::::::::::::::::::::::::::::::::::::D:::E: Hmu1494 ::::::::::::M:::::::::::::Y::::::::::::::::::::::::ID::::::V rrnAC0538 ::::::::::::::::::::::::::Y:::::::::::::::::::::::::DNK::::V Hut0434 :::::::::::::::::::::::::::::::::::::::--------------------- consensus EDLGDGEAFLMTDWAESIRRVQFHRKQTFDAGATPGLDDFERPELKSVSGDLVSELEEIS #oth 112321131222113142212113214111111111111111121112233113213412 hla1380 ::::::::::::::D:::::I::::::::::::::::::::::::::::S:::G::QS:: HVO_1301 ::M:N::G::V:::S:::::::::K:E::::::::::::::::D::::D:::::D:K::: Hbo0241 ::MAN:::::V:::S::::::::RK:S::::::::::::::::D:::ID:N:::::QD:: NP2180A ::M::::C::::::D:D::::::E::R:::::::::::::::::::::::S::E:::::T Hmu1494 :::D::::::::::::T::::::::::::::::::::::::::::::::D:::G:::T:: rrnAC0538 :::D:::::M:N::::QVS::::::::::::::::::::::::::::::D:::::::T:: Hut0434 ------------------------------------------------------------ consensus DEKARRESRIADLRQELDKKNARIAELERELEDARDLSRMADQFAQAMLDKAE------A #oth 223433332142133223223421331232132111234112213312343222211112 hla1380 ::EE::::E::::K:D:::RDQ::Q:::::::::::::N::::::::L:G:::::::::: HVO_1301 :::::Q::::::::::I:::D:::RQ::::::E:::::::::::::::FQ:::::::::: Hbo0241 ::::::::E::::::::E::E:K:RD:K::::E:::::H:::::::::FQ:::::::::: NP2180A ::QN::AN::EE:ER::KQ:ED::QD:::Q:A:::::KQ:::R:SR::MEQVTGRPLSA: Hmu1494 E::EQTQG::S:::E::::::S::::::K::Q::::MT:::E::TE:L::HV:GY::::N rrnAC0538 EDQQET:N::KE::E::::::S::::::A::Q:::::::::E::TE::::Q::DY::::N Hut0434 -----------------------------------------------------::::::- consensus PGR--------------------------------------GGDGPNLER---------- #oth 121232222222222211111111112333233232323323332355541111111111 hla1380 :Y:::::::::::::::::::::::::::::::::::::::::N::SVAA:::::::::: HVO_1301 :Y:::::::::::::::::::::::::::::::::::::::::::R::N::::::::::: Hbo0241 :Y:::::::::::::::::::::::::::::::::::::::::Q:R::K::::::::::: NP2180A :::QSQLGEA:::::::::::::::AVRRDPQLEADLDAVRN::REPT:S:::::::::: Hmu1494 :::TQKEKERTRQAQLRGALDDGDEADDESSVAESTDDRSA:S:::DG:PSDGAEPASTA rrnAC0538 :::TEQEKMRRQRERF:::::::::ADQQASDGDTDAVSEADA:::HEQP:::::::::: Hut0434 ---::::::::::::::::::::::::::::::::::::::---------:::::::::: consensus --------------------PEPGQTA----------------------DGEYNAAANGD #oth 111111111111111111112522432111111111212221222222433254454333 hla1380 ::::::::::::::::::::GGE:T:G:::::::::::::::::::::D::DQSVLKSY: HVO_1301 :::::::::::::::::::::ADK:A:::::::::::::::::::::::L:::DGS:D:: Hbo0241 ::::::::::::::::::::::EK:S:::::::::::::::::::::::L:::::PK::S NP2180A :::::::::::::::::::::V:DAA::::::::::::EWDGSDPNVSE:S:A::D:DT: Hmu1494 DEPADAADESDGRSDGPADT:DD:SVTPDTDEPAPDGTSGGGFGDAFGSFADGGP:IS:G rrnAC0538 :::::::::::::::::::::::DE::::::::::DATSGGGFGDAFSAFA:DG::M::G Hut0434 ::::::::::::::::::::--::T:T::::::::::::::::::::::----------- consensus EADGAADASEAGDGAADAAAAGAADDA-DAP----DGADSDAEPAANG-T-GADDGAPVA #oth 545342454444443334434556532533233324335435323554423545534533 hla1380 ::VA:TER::DA::D::VDTDTT:GNRDT::NDTDSD:PA:DS:TGETP:DDSS:::::D HVO_1301 V::A::::GSGD::::::D:PPRQLE:PSG:PWPTH:LL:ERDE::ADG:::GPS::GA: Hbo0241 DGTD::TS:D::TA:::D:T:SVRE:-:---::::---E:HE:E:VTSA:A::YP:LDLD NP2180A PQ::QTGD:SG:TIIGA:E::::W:E:A::SQGSDN::::E:::HQ::TEPLN::AE:LN Hmu1494 :PA:DT:ETA::E::T:D:GE::T:::G:E:::::::L:L:F::::S::-:N::G::E:: rrnAC0538 S:S:G:::N:SSAD:GQES-DASST::ES:S:::::SSSV::::TS:::-:H:ANTDV:: Hut0434 ---------------------------:---::::-------------:-:--------- consensus DDAAPANGDVA---------QSETEADEAPGLAPRED--VVER----------------- #oth 554456443331111344324545564345546414311234411111111111111111 hla1380 :VDPVTRA::::::::::::E:ALRF:D:VE:GT::A:::I:E::::::::::::::::: HVO_1301 SE:::SA::ESWLADAEMGDFQPA:LHP:::AES:R:::::D:::::::::::::::::: Hbo0241 R:GVGDDVS:::::::::::-P:RAHS:LA::TG:::::::::::::::::::::::::: NP2180A ::TE:L:N:PE::::PNSDGG:K:QSSDMRASV:PS:DPL:A:::::::::::::::::: Hmu1494 FAD:T:D::ES::::GDADD:R:ST:::R:HSQ::FV:::D--::::::::::::::::: rrnAC0538 NG:VAN::A::::::APVNG:T:::TA::DDE:L:AA::IA:AVEAEQSDEATGSADSET Hut0434 -----------:::::::::-------------::SS::::SS::::::::::::::::: consensus ------------LRAEIEALDDLSRRMLAHYREQGASDPLAAHFAAGGSGDRGLAYARNR #oth 111111111111235532412342331134123533531341144112411445113322 hla1380 ::::::::::::::SR::::PE::QG::R:::RE:V:::V:::ID:::D::S:H::S:H: HVO_1301 ::::::::::::MT:I:D::G:AHHG:::::::R:V:::::::V:::ET::QH:::G::: Hbo0241 ::::::::::::::NVVAS:P:V::::::F:::ID:C::VD::V:::EV::KQ:::S::G NP2180A ::::::::::::::R::DD:::RT:E::RR::DA:PLE:TE::RT::::::::P:::A:: Hmu1494 ::::::::::::::T:L:EM:EKT::::QY:V::A:DT::N:::S:::::::TS:::H:: rrnAC0538 PADFDGPAVYGD:Q:D::E::RKTC::::Y:::::PGT::N:::S:::::::TA:::::: Hut0434 ::::::::::::----MAHMPT:::T---------------------------------- consensus ELRRAGFIEHVGRGRYAYALPALVREESADR-----LDAEEVAEVVSAVEAAFV------ #oth 421321323121215133234312434443311111233432455154323422122211 hla1380 PI::::V:R:A:::H::::V:D:I::AY::::::::::E:S:R:I:R:::T:::PPAERS HVO_1301 S:::::::R:A:::K:E::::D::SD:Y::L::::::GDD:LR:T:A:I::S:::::::: Hbo0241 P::::::::::::::::::I:E::::TF::::::::::E::L:A:::::::S::PTMG:: NP2180A T::QR:LVA:::C:Y:D:::T:::ES::S::LSTTGPS:TA::KQ:QN:::::::::::: Hmu1494 :::L:::V:::::::::PR:K:::::RAPGE:::::PS:TA:VDA:TELRSTI-:::::: rrnAC0538 :::LR:LV::::::Q:DTR:A:::Q:::DR::::::::DN::ES:::RL:SV:L:::::: Hut0434 -------------------------------:::::------------------:::::: consensus ---------------------D------GDGD---------------------------- #oth 111111111111111111111223323434323333333332223221122211111111 hla1380 YPPDADPAEVGVGNGSAETDL:GEVVSP:E::DSDGSASETEASADQPTSHLSDAARKIA HVO_1301 :::::::::::::::::::::E::::EEA::E:::::::::::::::::::::::::::: Hbo0241 ::::::::::::::::::::::TGESET:GS:SETETEDDAAAADD:::::::::::::: NP2180A ::::::::::::::::::::::GVSVADDS::AAETVDKPDASATAWPTQQR:::::::: Hmu1494 :::::::::::::::::::::-:::::::SA-:::::::::::::::::::::::::::: rrnAC0538 ::::::::::::::::::::::::::::::S::::::::::::::::::::::::::::: Hut0434 :::::::::::::::::::::-::::::----:::::::::::::::::::::::::::: consensus -------- #oth 11111111 hla1380 ERGHTVDE HVO_1301 :::::::: Hbo0241 :::::::: NP2180A :::::::: Hmu1494 :::::::: rrnAC0538 :::::::: Hut0434 ::::::::