| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||
|---|---|---|---|---|---|---|---|---|
| Consensus score | 3300 | HVO_A0602 | Hbo3535 | NP4660A | hla2248 | rrnAC2574 | Hmu2736 | Hut2972 |
| 2228 | HVO_A0602 | 3323 | 2245 | 1729 | 1758 | 1724 | 1803 | 1633 |
| 2224 | Hbo3535 | 2245 | 3320 | 1725 | 1660 | 1724 | 1784 | 1650 |
| 2199 | NP4660A | 1729 | 1725 | 3279 | 1783 | 1739 | 1852 | 1758 |
| 2330 | hla2248 | 1758 | 1660 | 1783 | 3323 | 1835 | 1932 | 1838 |
| 2353 | rrnAC2574 | 1724 | 1724 | 1739 | 1835 | 3396 | 2172 | 2153 |
| 2576 | Hmu2736 | 1803 | 1784 | 1852 | 1932 | 2172 | 3287 | 2263 |
| 2358 | Hut2972 | 1633 | 1650 | 1758 | 1838 | 2153 | 2263 | 3248 |
460 symbols consensus --------------MFGTSGIRGPVGETVTADLALDIGRALGID-ADRVVVGRDPRESGR #oth 111111222221222.....1..11.111..2...31.1.133212312.1.1.1.41.3 HVO_A0602 ::::::::::::::::::::::::::R::::E:::R::::V:C:::CT::::Q:A:L::D Hbo3535 ::::::MQSAEVTVS::::::::::::::::::::H::Q:VAVE::::A:::::A:VT:D NP4660A ::::::::::::::::::::::::F::::::E:::::::::TTAGYNTI:::::::TT:P hla2248 ::::::::::::::::::::V::R::::I::::::::::::VT:G::T::L:::A::::: rrnAC2574 MDFRGGPTQRAVMTQ::::::::::::::::E:::SV::::::::CE:::::::::A::E Hmu2736 :::::::::::::::::::::::::::D:::A::::V:::::VE:::::::::::::::E Hut2972 :::::::::::::::::::::::::::::::::::SV::::::::::::::::::::::: consensus LLADALSAGLRECGTDVIDLGVAATPTVARSVGWRDADAGVAITASHNPAADNGIKLWQP #oth 4.52.131.21.2.31.121.112...11.1.42421.1.231......12...1...42 HVO_A0602 V::::V:::V::::AN:VR::::S::::::A:::AG::::IG::::::::::::L:::T: Hbo3535 V::::::V::::::::::RV:::::::I::::E:FG::V:::::::::::::::::::NE NP4660A ::V::::::I::G:GN::NV:::S:::::::::::A:::::SV::::::PE:::::::S: hla2248 T:SR:::::VT:::G::::V::QP::::::::VREG:::::VV:::::::P:::::::AA rrnAC2574 Y:QT::V:::::S:V::::::G:::::IG:A:A:Q:::::::V::::::PE::::::::: Hmu2736 ::T:::A:::::S:::::::::::::::::::::::::::A:::::::::P::::::::: Hut2972 F:L:::T:::::S:::::::::::::::::A:RGE:G::::V:::::::P:::::::::: consensus SGQAFDEAQRERIAERLDEDAFDLAAWDELGEERRWDGA-ERHVRAIADAVDDAD--DLH #oth 212..142435312522443435331..34.33443332432.34214332466521334 HVO_A0602 ::R:::K::TRD:VH::NR:EVS::::::H::::A:PE:AT:::SHLVSSF::L::::VS Hbo3535 :::::SPT:N:::ER:::N:DSAR:T::SF:S:STDRS:V::::S::T:EF:SMT::G:N NP4660A ::M:::::::SE:ETL:AS:R:ES::::AV:S:E::EA:T:Q:IT::::T:PQVE:::V: hla2248 D:R::::DEND::::IVE:A::N:G:::::::H:HV:::R:::E::LRES:AIP:::::S rrnAC2574 ::::::ADL:AT:EQ:::::::QP:::::S:GLVSR:AS:Q:::D:LVTEIGERNL::S: Hmu2736 ::::::::G:::::::VRDGVA::E::::::TRTT:::R::::A:T:::::SL:PADAPP Hut2972 TT::::T:RQNTV:D:IESE::::V:::D::TR::R::::DA::E::L:::SVTS::PPD consensus VVVDLGNGAGRVSVDALYALGCTVETLNAQPDGAFPGRPSEPTAENCTSLQALVAATDAD #oth 111.1...2.21121..522.13.2.11112..4..2.1...2.1313214331322212 HVO_A0602 :AF:::::T:::::::::E::A::N:ID::Q::R::A:K:::N::TL:A:RRT:P:LG:: Hbo3535 A:::::::T:::T:::::E::A::N::D:::::T::A:K:::N::TL:T::RT:P:L::: NP4660A A:::V:::::DLTI:::R::::::D::::R:::H::S::::::::A::A:::H:E::A:: hla2248 ::::::::V:::TA:::H:T::D:::::::R::R:::::::::::::QTACVV:E::::: rrnAC2574 :::::::::::::::::S::::S:::::G:::::::::::::K::H:E::ST:::ES::: Hmu2736 :A::::::::G::::::QE:::A::::::::::S::::::::::D::A::S::::N:::E Hut2972 ::::::::::G:::E::TQV::D::::::::::::::::::::::::E::T::ARE:GR- consensus LGIAHDGDADRMRAVDEDGEFVSGDALLALFARDAASPGDRVAVPVDTSLLVADVLAEAG #oth 3.21....2..12.2322.4112..3...211.32122.131.1.11..11.31512331 HVO_A0602 V:L::::::::LV::::T:TY:P::::::::::::V::::A:::::::::::Q::VEA:: Hbo3535 F:::::::S:::V::SDT::Y:P::V:::::::::V::::S::::::::::::::V:S:: NP4660A I:::::::G:::M::::T:R::G::E:::::G:AV:TE:::I:A:LN::Q::DAA:::V: hla2248 :::V::::::::M:I::R:Q:::::::::::G:RE:DA::::::::::::::::T:::V: rrnAC2574 :::::::::::::::AA::T:L:::V:::V:::A:::::E::::::::::A:E:H:DDSD Hmu2736 ::V::::::::L::ATA::S:::::E:::V:::E::::::T:::::::::A:::F::::D Hut2972 :::::::::::L:::T:::::L:::T:::IL:::::D::ET::A::N:::A:D:Y::ADD consensus ADVTYTPVGDVYVAEAASEPGVVFGGEPSGAWIWPDQTLCPDGPLAACRLAALVAAEGPL #oth 35121.1...121.122243121............33111..121..22112.243231. HVO_A0602 GR:::::::::H::::VA:::Y::::::::::::::E::A:::HY::LT::D:::RGA:: Hbo3535 GT:V::::::::I:::V:QS:F:::::::::::::::::A::ANY::L:::D:IRR:::: NP4660A :ELVR:R::::::::R:R:AD::::::::::::::TT::A:::::::A:AVE:::TN::: hla2248 ::::::::::A:::AETAN::::::::::::::::E::R:::::::::T:::::G:::S: rrnAC2574 VS:E::::::::::::::AD::A::::::::::::ER:::::::::::TA:::-DS:RS: Hmu2736 VA:::::::::::::R::R:::A:::::::::::::::::::::::::::V::-H::E:: Hut2972 I::VR:R::::S:::R::::::A::::::::::::A:A:::::::::AK:VE:-:::R:: consensus SERVADLPA--YPIRRDSVPVDDKAAVMDRIAERATARYDDVDTLDGVRVDLDDGWFLVR #oth 32211323422.221.3.24223.331123243433241121412..1.112111.2.2. HVO_A0602 ::Q::::GGAG:AT::A:LSF:::HQAV::::RDIH:T::E:::I::I:::T:::::::: Hbo3535 ::Q:::IA:SR:TT::L:L::::::SA:RA:DGLLS:K:::I::T::::::T::::L::: NP4660A ::Q::S:EQ::::L::E:I:::::R::::GVT:A::D:::T:QQ:::::IER::::M:I: hla2248 :AM:DG:::::::::::::RT:A:E::VEHV::L:HE:FET:S::::I::ET:A:::::: rrnAC2574 GD:A::V:E::::::::::ET:Q:ET::::VR:TV:DA::::T:::::::::G:A:::L: Hmu2736 R::::AV:D:::::::E:IA:E::R::V::L:D:I::E::::A:::::::::G:A::::: Hut2972 AD::D:IE::::::H::::S:TE:::::E::H::VQ:E::::T:::::::::G:A:::L: consensus ASGTQPLVRITAEARDEDRADALFEEARDLVARARI---- #oth ....1..1.2...113332.34211311332342454311 HVO_A0602 ::::E:::::::::::::D::R:::DV:S::EG:::VA:: Hbo3535 ::::E::::V:::::Q:SK::::L::VTS:IEKEE:TT:: NP4660A :::::::::L:::GTTDAD:AS:LAT:::I::S::PA::: hla2248 ::::E::::::::::NA:D::D:::T::::ID::AADRSR rrnAC2574 ::::::::::::::::P:::::V:::::ARLTD:VV:::: Hmu2736 :::::::::::::::::E::RDA::I:::A::G::E:::: Hut2972 :::::::I::::::::PE::NTV:::::EI:T:TQG::::