Home |  Text search
7 genomes BUD1249 7 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0620

HVO_1596

Hbo3245

Hmu1020

Hut1030

hla1782

NP4066A

-

Pairwise sequence scores
Consensus score3703 NP4066A rrnAC0620 Hut1030 Hmu1020 Hbo3245 hla1782 HVO_1596
2678NP4066A 3733 2169 2380 2462 2251 2272 2315
2539rrnAC0620 2169 3563 2233 2269 2163 2098 2215
2920Hut1030 2380 2233 3943 2575 2476 2414 2570
3045Hmu1020 2462 2269 2575 3798 2514 2590 2629
2917Hbo3245 2251 2163 2476 2514 3821 2582 2633
2889hla1782 2272 2098 2414 2590 2582 3757 2703
3066HVO_1596 2315 2215 2570 2629 2633 2703 3700

571 symbols
consensus       -------------------------VLTKDLLRVSRAGGGYHPQFADRADRPLAARVIGV
#oth            111111111111111111111111121212122111111112131334332221132212
NP4066A         :::::::::::::::::::::::::M:::E:::::::::::::::TTA::EDV::::L::
rrnAC0620       :::::::::::::::::::::::::-----------------------------------
Hut1030         VPTAWGSAEFVATGGFSSPGGGIHI:::::::A::::::::::E:V:EGH:D::::::::
Hmu1020         :::::::::::::::::::::::::::::::::::::::::::::::D::E::::S:::T
Hbo3245         :::::::::::::::::::::::::::::::R:::::::::::::VG:ES::::::::::
hla1782         :::::::::::::::::::::::::::R:::::::::::::R:R::T:EH:::::::L:T
HVO_1596        ::::::::::::::::::::::::::::::::::::::::::::::::G::::::KA:::

consensus       FQGHVGEARATLDDALADLEREA----DDFKLVRGLAKLLEREATFETRAPLPPVRARRA
#oth            23311123145.32..231.322111111...1..1.2.21.112..132122.5.1.11
NP4066A         Y::::::P::Q:ES::T:::::T::::GQ::::::F::::::::A::::S:VS:R:::T:
rrnAC0620       ----------M:ET::::V:Q::::::::::::::::::V::::::::Q::ID::::::R
Hut1030         :::::::R:E::T:::TEV:::S::::::::::::F::::::D:::::::::::E:::::
Hmu1020         Y::::::::E::QT::T::::G:::::::::::::::::V:::::::::TAV::A:::::
Hbo3245         :::::::P:HR:::::SS::D::::::::::::::::A::D::::::VV:::::T:V:::
hla1782         :ES::::R:GD::::::A::AD:AESGG:::::::::A:I:::CV::::::V::Q:V:::
HVO_1596        :RR:::D:::A:::::::::A:::::::::::A::F:S::D:::V:::A:::::::::::

consensus       AFEAAESV-GVATEAE-RAAALDRAADRLGTDAAAIEASLYADRDVRQVLTEFDVRWDPD
#oth            2.1112321..211411.4311531.1512323332241.2..123212.232.5214.2
NP4066A         ::V::::::::V:::D::D:::VA:::D:D:S:D:LA:::F::::CE:R::A:::DY::E
rrnAC0620       V::::SD::::V::::::EQ::AE:::HF:::::SLADT::::::S:::::AV:S::G:A
Hut1030         :::::::I:::V::G::::R::QQ::::::S:R::::S:::::L:A::I:::::RQ:T:A
Hmu1020         ::::G:A:::::S:D:::R::IE::::G:AV:::D::R::::::EC:::::RV:T::E::
Hbo3245         T::E::TA:::P:TT:A:T:V:K:V:::::::TE:::E::::::A:NE::::::A::S::
hla1782         ::::::A:::::S:T:::ET:I:::::A::IEPGDV::::::::::NEI:VDA:::::::
HVO_1596        :::::M::G:::::E:::::::::::SS::SSP:GVDE::T:::E:E:::S:::P::T::

consensus       ELLEQYNLSLAQTALFDATEVRVRSSDPKALVSAVKRLRLMYEIRRTDEG-REVVVTGPD
#oth            2.32..1............21.2113..121.1....11.1..11322311.211.....
NP4066A         S:CT::D::::::::::::S::::TD:::R::::::::::L:::::A:A:::D:::::::
rrnAC0620       ::RT:::::::::::::::::::::::::::::::::C:::::::::GN:::::::::::
Hut1030         A::::::::::::::::::AI:IS:A::::::R:::::G:L::V:K::D:A::LH:::::
Hmu1020         ::IA::::::::::::::::::L:::::RT::::::::::::::EA::::::T:::::::
Hbo3245         S::::::::::::::::::::::::::::R::::::::G:::::::DG:T:::L::::::
hla1782         S:::::D:::::::::::::::I::N:::R:::::::::::::VET:P:::::L::::::
HVO_1596        :::A::::::::::::::::::::::::::V::::::::::::::K::A:::::::::::

consensus       ALFQRTRRYGTAFARLLRTVAA-AAEWRLEATIDDRGTERTMTLSDGDVSVPDVEPVAEP
#oth            1..321.....2......1..31231.314..1..1.1..311.233.22..211.2211
NP4066A         :::K:S:::::R:::::::::::T:D:Q::::::::::::RLR:EA::IE:::TD:::::
rrnAC0620       :::SN::::::R:::::::::T::N::E:T::V:::::::KL::::::::::G::::T:V
Hut1030         :::KS::::::Q::::::S::K:TDD:::::::::D:R::::::T:A:::::::D:IV::
Hmu1020         R::::::::::R::::::::::S::::T:R:::::::::::LR::HE::::::::::TDV
Hbo3245         :::R:::::::::::::::::G:T:::TMT::::::::::E:::::A:L:::N::::T::
hla1782         :::S:::::::::::::::::K:S:::E:S:::::::R::::R::::::T::G:::::::
HVO_1596        ::::::::::::::::::S::T::GD:::A::::::::::E:::TSD:::::G:::M:::

consensus       TYDSGVEADFAARFAGLDLDWDLVREPEPLAAGARVMIPDFAFDY------------R--
#oth            31..2.....13..32...1.4.4....1.11.4212......21111212222221411
NP4066A         :F::A:::::YS::SS:::::R:L:::::::::EH:V::::::EW::::::::::::K::
rrnAC0620       S::::::::::G:::A:::::::I:::::::::EH:V::::::EWRPGADTGVQDTG:GE
Hut1030         ::::D::::::T:::S:::P:::R::::::E:::S:A::::::E::::::::::::::::
Hmu1020         S:::::::::::::EA:::::E:T:::::::::S::A::::::::::::::::::::E::
Hbo3245         ::::::::::::::E::::::E:::::::::::::A:::::::V:RPGGDAAGENSGD::
hla1782         DF:::::::::G::R::::::T::::::T:ET:N:::::::::::::::::::::::D::
HVO_1596        GF::::::::::::R::::::S::::::::ET:TS::::::::::::::::::::::A::

consensus       -------HADFRVFFEIMGFWTPEYVEKKLGQLADV-EDVELLVAVDESLGVGE------
#oth            1111111232..2...1......1..2...41123211..221..2....1.11111111
NP4066A         ::::::::G:::::::::::::::::::::SRFS:L::::AF:::Y::::::::::::::
rrnAC0620       STDRTDGDTP::I:::::::::::::K:::TR:DAL:::::M::::::::::::::::::
Hut1030         ::::::::G::::::::::::::A::::::A:FDTI:D:::::::Y::::::::::::::
Hmu1020         :::::::Y::::::::::::::::::::::S:::EI:D::::::::::::A::DQQSASR
Hbo3245         :::::::DPE::::::V:::::::::::::D:F:T:SD::::V::A::::A:A:::::::
hla1782         ::::::::::::L:::V:::::::::A:::::::::::::D:::::::::::::::::::
HVO_1596        ::::::::::::::::::::::::::::::::::::::::::V:::::::::::::::::

consensus       --------DIEARDHRAIPYSGTVRVKDVRDALRRYEEELVAAAAADLPDELSPDADVIT
#oth            111111112111212.122.211.12.111.2.14..43132221231.33.5.11.142
NP4066A         ::::::::::::TGQ::F::TK:::L::::::::P:::T:RE:S::S:::R:V:::::T:
rrnAC0620       ::::::::E:::T:N:::::::::::::::::::P:::R::RESV:EI::::R::::::S
Hut1030         ::::::::A:::::::::::T:S::::::::::::::TD::::NV:E::A::E:E:::::
Hmu1020         TESGDIGAE::::::::::::::::I:::::::G:::S::T::N::T::QT:T:::::L:
Hbo3245         :::::::::VAEL:::VVT:::S:H::::V:L::I::D::I:E::D::::::::::::AS
hla1782         ::::::::E:A:::::VVS::::::::AIV:V::E::A:F::D::::::ES::::::A:G
HVO_1596        ::::::::::A::::::V::A:S::::::V:V::D::SD:::D::SS::A::A::D::V:

consensus       LAELAAEHGVSEDALEDVSFPDHERVGRTLVRPAVLDALAEEIEAGMSLSAAEAVLDEYG
#oth            .321.2421.1121212421.2.12...1.11.2123222321121122221133.2321
NP4066A         ::AV:DD:::::AVV:SAT::E:D:::::::::::C::VD::LT:::::AE::T::SGH:
rrnAC0620       :TD:::::::::::::::A::A::::::::ID:V:::E::::::PE:AYQ::IGR:SAH:
Hut1030         :::::ET:::::::V:TT:::E::L::::::::SI:AD::QR::PE:T::E:::::::::
Hmu1020         ::::::::::::A:V::R:V::::::::::::::::S:VDD:::T:::::::::::::::
Hbo3245         :::::DSYA:A:::::S:::::::Q:::A::::::V:::GD:L:::::::D:::I:E:::
hla1782         :D:::D:::::VE:I::K::::::L:::::::::::E:AG:KL::::AF:EV:SI::D:A
HVO_1596        :SD:::AR:::V:::D::A::E::L:::::::::::::::G:::::L::::::SA::DR:

consensus       IDDASAVLSRLGYRVEWEGLGGGTIREK---
#oth            1212..2.12..1..1....11.12233421
NP4066A         ::ET::M::A::::::::::::::VT:A:::
rrnAC0620       :E:D::A:AH:::::A:::::K:::QPRE::
Hut1030         :::::::::::::::::::::::V::SQKSA
Hmu1020         L::::::::A::::::::::::::::K::::
Hbo3245         LS::::::::::::::::::T:::L:::Q::
hla1782         ::::::A:::::F:::::::::::V:::GE:
HVO_1596        L:::::::::::::::::::T:::V::::::