|
Pairwise sequence scores | ||||||||
---|---|---|---|---|---|---|---|---|
Consensus score | 2367 | HVO_0023 | Hbo1474 | hla1671 | NP0962A | Hut2813 | rrnAC2127 | Hmu2724 |
1124 | HVO_0023 | 2098 | 903 | 736 | 712 | 781 | 438 | 704 |
1342 | Hbo1474 | 903 | 2395 | 879 | 978 | 1064 | 706 | 985 |
1353 | hla1671 | 736 | 879 | 2456 | 1048 | 945 | 828 | 1072 |
1528 | NP0962A | 712 | 978 | 1048 | 2389 | 1119 | 789 | 1130 |
1604 | Hut2813 | 781 | 1064 | 945 | 1119 | 2370 | 898 | 1162 |
1114 | rrnAC2127 | 438 | 706 | 828 | 789 | 898 | 1716 | 969 |
1537 | Hmu2724 | 704 | 985 | 1072 | 1130 | 1162 | 969 | 2469 |
353 symbols consensus ---MTR-RRYVLGGLFAAIGLLAAVLLWSVLGTVFFAITVAYVLYPLRRRLVARGLSRRV #oth 122443513322332332533222431441351121221111213142242352154223 HVO_0023 :::::AS:P:::::V::LFA:::::::VD::A::::::::::L:V::::::E:C:A::W: Hbo1474 :::V:LE::::F:S::VLA:VA::F::R::::::::SV::::L:W:V:QAV:R::W:P:A hla1671 ::::ILN::RL:AT:LV:VAA::::V:AE::R::V::V::::::::ICQW::G::::::I NP0962A :MSSL:H::::::::L::::V:::AV::N:V::::::V::::::::A:Q:::N::VP::: Hut2813 :::---:---::A:::G::S:::ILT::::FW::::::::::::::V::::A::::GP:: rrnAC2127 :::---:----------------------------------------------------- Hmu2724 MYCGM:R:QG::V::V::T:::TI::::::VT:::::::::::::::::L::E::TH::I consensus ASGLATAVAFLAVAALLAPLAWVLYRRRDALLELLGLLPDEVPIEVLGMSYTIEVADVVA #oth 134341341223244333124453232345344535521442332321145432344333 HVO_0023 ::LA::V::AVG:GVV::::VVI:FL:LSDI:::AA::::V:T::F:::VE:VTLD:::: Hbo1474 :::::::G:::::L:G:T:::I:V:L:F:S:TT:V::::SNLSF:LF::T:ALTL:E:TT hla1671 :CVGT:VI::V:A:I:VV::LY::::::AE:I:I:EQI::V:::S:G:FELV::MVPY:: NP0962A ::::L::A:::T:VV::::I::TIF:Q:G:I::F:NN::::L:V:AF:FVV::D:::L:D Hut2813 :A::S:::::VGALGV::::GYAV:V::S:FFDMV:D::P:FS:T::E::H::D:TT::D rrnAC2127 ----------------------------------------M:TL::GEF::PV:I:PTLI Hmu2724 :AAA::S:::::::::IV::L:S::::::T::AY:RT::TSFEF:::::PFGF::GSLA: consensus AARETLRSVALDLAAAAPVLALKLFLFTLLVYALLLRPRAVGRAAFRVVPAEYHDAVRAL #oth 3344433331452.332132322332.4211121.23163253224231.23.2333421 HVO_0023 VGLGL::::GRTA:T::::VLI::T::GF::F::::SGD::::TLPAL:::D:RG:AT:: Hbo1474 FTVAY::QL:TVV:::T:::LV:VT::VF:::S::YHGEDAQQ::LA:::SS:QS:A::: hla1671 ::EVWV:Q:::A::::::R:V:E:VV::F:::G::Y::GS:EA:V:G::::::::IPTR: NP0962A TTAD::Q:I:IS:::D:IF:::Q:LM:A:VL:G:::::N:::::::::T:SP:::ILV:: Hut2813 VV:::AG:M:::A:S::::::::F:::V::::::::K::MPA:::R:::::::::V:Q:: rrnAC2127 ::::::TA::V::::ES::::::AV::SI::::M:W::Q:PKK:VY:T:::S::EV:NR: Hmu2724 T::VAITNL:VEV:GS::IIG:::::::::::::::::S:APAVV::A::E::QSL::TM consensus HERARDTLYAIYVLQAATAVGTFVIALVVFWLLGYDAAVTLAVVAGVLQFVPIVGPSVLI #oth 13.313..121..1.1..131.132143..33...34214..22112...1.11..2313 HVO_0023 N::::E::F::::::::::::::A:G:::::A::::YV::::T::A::::I::::::::L Hbo1474 NS::::::F::::::::::A::::L:VP::FF:::::V::::T::A::::::::::TL:L hla1671 :::T:E:::S:::::::::A::S:L:F::::A:::GSP:L:::I::::::I::I:::::V NP0962A :R:IAG::::L::I::::::I::PL::I::Y::::PDVFV:::L:AL:::I:::::GM:A Hut2813 :::L::::FGL::::G::G::::::::P::F::::::::::::LS::::::::I:::::: rrnAC2127 :Q:L:G:::::::::::::F::::V:W::::::::QG:FA::::::I:::::VI::::VV Hmu2724 :::T:N:::::::::G:::L:::L::YL::AG:::PG:FG::A:::I:::::V::::I:: consensus AALAATDVLVGNTTAAILVLVLGLVFVGFLPDALIRPRLAAYTADIPASLYFVGFTGGVL #oth 333134333314433.44253414321342113321241255334223211121131131 HVO_0023 ::M::YHAA::DVV::-------------------------------------------- Hbo1474 LG:::YQLAL:H:VQ:L::VTV:GAL:AW:::V::::P::KQ:::::G:::::::F::T: hla1671 V:::VG:L::EE:GR::A:::::::L:S:V:::V::TQ::DW:GR:SPG::::::V::I: NP0962A :G::GH:::::MPHR:VG:II::PL:::L:::L:V::::::SK:KL:::::::::V:::: Hut2813 GV:VL:E::AE:V::::::G:V:F:::AG:::V::::::S:VA::L:G::::I::::::: rrnAC2127 LTI:VA:IIN::I:G:V::T:F:::::::::::V:::K::R::TGL:::::::::::::: Hmu2724 :VV:::::VA:DL:G:ATL::I:::::::::::I:::Q::P:::::::::::I::::::: consensus TLGAIGIIAGPLVVALLVEAVDLLTEERQPDAVEGD----------------- #oth 241321322111.12.12.3331.34144533354433332222111111111 HVO_0023 ----------A::::::A:S::::GA:LRV:D:G::GDERDESADDSVDPSQP Hbo1474 ::::V::V::::::G:F:::AS:::T:LHAVP::D:::::::::::::::::: hla1671 ::::V:L:V:::::S::L:VI:M:S:RDV:PDRI:KEERAESTD::::::::: NP0962A :V:V:::::::::::::::::N::S:RN:SA:----::::::::::::::::: Hut2813 SM:::::::::V:::::A:S:E::AS:QH:::::PAEP::::::::::::::: rrnAC2127 :::V::F::::V:I:::::LSS:::S:::G:QQRLT::::::::::::::::: Hmu2724 SI:IV:F:::::::::F::::E:::N::PTVQRQL:SEHTE::::::::::::