Home |  Text search
7 genomes BUD1251 7 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2127

HVO_0023

Hbo1474

Hmu2724

Hut2813

hla1671

NP0962A

-

Pairwise sequence scores
Consensus score2367 HVO_0023 Hbo1474 hla1671 NP0962A Hut2813 rrnAC2127 Hmu2724
1124HVO_0023 2098 903 736 712 781 438 704
1342Hbo1474 903 2395 879 978 1064 706 985
1353hla1671 736 879 2456 1048 945 828 1072
1528NP0962A 712 978 1048 2389 1119 789 1130
1604Hut2813 781 1064 945 1119 2370 898 1162
1114rrnAC2127 438 706 828 789 898 1716 969
1537Hmu2724 704 985 1072 1130 1162 969 2469

353 symbols
consensus       ---MTR-RRYVLGGLFAAIGLLAAVLLWSVLGTVFFAITVAYVLYPLRRRLVARGLSRRV
#oth            122443513322332332533222431441351121221111213142242352154223
HVO_0023        :::::AS:P:::::V::LFA:::::::VD::A::::::::::L:V::::::E:C:A::W:
Hbo1474         :::V:LE::::F:S::VLA:VA::F::R::::::::SV::::L:W:V:QAV:R::W:P:A
hla1671         ::::ILN::RL:AT:LV:VAA::::V:AE::R::V::V::::::::ICQW::G::::::I
NP0962A         :MSSL:H::::::::L::::V:::AV::N:V::::::V::::::::A:Q:::N::VP:::
Hut2813         :::---:---::A:::G::S:::ILT::::FW::::::::::::::V::::A::::GP::
rrnAC2127       :::---:-----------------------------------------------------
Hmu2724         MYCGM:R:QG::V::V::T:::TI::::::VT:::::::::::::::::L::E::TH::I

consensus       ASGLATAVAFLAVAALLAPLAWVLYRRRDALLELLGLLPDEVPIEVLGMSYTIEVADVVA
#oth            134341341223244333124453232345344535521442332321145432344333
HVO_0023        ::LA::V::AVG:GVV::::VVI:FL:LSDI:::AA::::V:T::F:::VE:VTLD::::
Hbo1474         :::::::G:::::L:G:T:::I:V:L:F:S:TT:V::::SNLSF:LF::T:ALTL:E:TT
hla1671         :CVGT:VI::V:A:I:VV::LY::::::AE:I:I:EQI::V:::S:G:FELV::MVPY::
NP0962A         ::::L::A:::T:VV::::I::TIF:Q:G:I::F:NN::::L:V:AF:FVV::D:::L:D
Hut2813         :A::S:::::VGALGV::::GYAV:V::S:FFDMV:D::P:FS:T::E::H::D:TT::D
rrnAC2127       ----------------------------------------M:TL::GEF::PV:I:PTLI
Hmu2724         :AAA::S:::::::::IV::L:S::::::T::AY:RT::TSFEF:::::PFGF::GSLA:

consensus       AARETLRSVALDLAAAAPVLALKLFLFTLLVYALLLRPRAVGRAAFRVVPAEYHDAVRAL
#oth            3344433331452.332132322332.4211121.23163253224231.23.2333421
HVO_0023        VGLGL::::GRTA:T::::VLI::T::GF::F::::SGD::::TLPAL:::D:RG:AT::
Hbo1474         FTVAY::QL:TVV:::T:::LV:VT::VF:::S::YHGEDAQQ::LA:::SS:QS:A:::
hla1671         ::EVWV:Q:::A::::::R:V:E:VV::F:::G::Y::GS:EA:V:G::::::::IPTR:
NP0962A         TTAD::Q:I:IS:::D:IF:::Q:LM:A:VL:G:::::N:::::::::T:SP:::ILV::
Hut2813         VV:::AG:M:::A:S::::::::F:::V::::::::K::MPA:::R:::::::::V:Q::
rrnAC2127       ::::::TA::V::::ES::::::AV::SI::::M:W::Q:PKK:VY:T:::S::EV:NR:
Hmu2724         T::VAITNL:VEV:GS::IIG:::::::::::::::::S:APAVV::A::E::QSL::TM

consensus       HERARDTLYAIYVLQAATAVGTFVIALVVFWLLGYDAAVTLAVVAGVLQFVPIVGPSVLI
#oth            13.313..121..1.1..131.132143..33...34214..22112...1.11..2313
HVO_0023        N::::E::F::::::::::::::A:G:::::A::::YV::::T::A::::I::::::::L
Hbo1474         NS::::::F::::::::::A::::L:VP::FF:::::V::::T::A::::::::::TL:L
hla1671         :::T:E:::S:::::::::A::S:L:F::::A:::GSP:L:::I::::::I::I:::::V
NP0962A         :R:IAG::::L::I::::::I::PL::I::Y::::PDVFV:::L:AL:::I:::::GM:A
Hut2813         :::L::::FGL::::G::G::::::::P::F::::::::::::LS::::::::I::::::
rrnAC2127       :Q:L:G:::::::::::::F::::V:W::::::::QG:FA::::::I:::::VI::::VV
Hmu2724         :::T:N:::::::::G:::L:::L::YL::AG:::PG:FG::A:::I:::::V::::I::

consensus       AALAATDVLVGNTTAAILVLVLGLVFVGFLPDALIRPRLAAYTADIPASLYFVGFTGGVL
#oth            333134333314433.44253414321342113321241255334223211121131131
HVO_0023        ::M::YHAA::DVV::--------------------------------------------
Hbo1474         LG:::YQLAL:H:VQ:L::VTV:GAL:AW:::V::::P::KQ:::::G:::::::F::T:
hla1671         V:::VG:L::EE:GR::A:::::::L:S:V:::V::TQ::DW:GR:SPG::::::V::I:
NP0962A         :G::GH:::::MPHR:VG:II::PL:::L:::L:V::::::SK:KL:::::::::V::::
Hut2813         GV:VL:E::AE:V::::::G:V:F:::AG:::V::::::S:VA::L:G::::I:::::::
rrnAC2127       LTI:VA:IIN::I:G:V::T:F:::::::::::V:::K::R::TGL::::::::::::::
Hmu2724         :VV:::::VA:DL:G:ATL::I:::::::::::I:::Q::P:::::::::::I:::::::

consensus       TLGAIGIIAGPLVVALLVEAVDLLTEERQPDAVEGD-----------------
#oth            241321322111.12.12.3331.34144533354433332222111111111
HVO_0023        ----------A::::::A:S::::GA:LRV:D:G::GDERDESADDSVDPSQP
Hbo1474         ::::V::V::::::G:F:::AS:::T:LHAVP::D::::::::::::::::::
hla1671         ::::V:L:V:::::S::L:VI:M:S:RDV:PDRI:KEERAESTD:::::::::
NP0962A         :V:V:::::::::::::::::N::S:RN:SA:----:::::::::::::::::
Hut2813         SM:::::::::V:::::A:S:E::AS:QH:::::PAEP:::::::::::::::
rrnAC2127       :::V::F::::V:I:::::LSS:::S:::G:QQRLT:::::::::::::::::
Hmu2724         SI:IV:F:::::::::F::::E:::N::PTVQRQL:SEHTE::::::::::::